The largest database of trusted experimental protocols

6 protocols using tublin

1

Protein Expression Analysis in Cell Metabolism

Check if the same lab product or an alternative is used in the 5 most similar protocols
Total proteins were extracted by RIPA buffer supplemented with PMSF (Solarbio, Beijing, China) and quantified by a BCA kit. Then, the proteins were separated in SDS-PAGE gels and transferred into PVDF membranes (Millipore, Massachusetts, USA). Membranes were blocked with TBST with 5% skim milk powder and incubated overnight at 4 °C with primary antibodies against YAP1 (1:1000), P-YAP1 (1:1000), VEGFA (1:1000), Hexokinase II (HK2; 1:5000), LDHA (1:2000), HIF1A (1:1000), GAPDH (1:5000), Tublin (1:1000), and β-actin (1:1000) (Proteintech, Wuhan, China). The next day, blots were washed with PBS and then secondary antibodies were incubated with the membrane at room temperature for 1 h. The membrane was visualized using a chemiluminescence kit (Absin, Shanghai, China) and quantified by densitometry analysis using ImageJ software. GAPDH and tubulin were used as loading controls.
+ Open protocol
+ Expand
2

Chondrocyte Protein Analysis: Evaluating Cellular Responses

Check if the same lab product or an alternative is used in the 5 most similar protocols
After 24 h of treatment, total proteins of chondrocytes were extracted using radioimmunoprecipitation assay buffer (beyotime) while nuclear proteins were extracted using nuclear protein extraction kit (beyotime). Protein concentrations were measured using a BCA protein assay kit. Total protein (20 µg per sample) was separated by SDS-PAGE on a 12% gel and subsequently transferred to a nitrocellulose membrane (EMD Millipore). The membranes were incubated overnight at 4°C with the following antibodies: Nrf2 (1:1000; Cell Signaling Technology Inc., USA), NQO1 (1:1000; Proteintech, Wuhan, China), Keap1 (1:1000; Proteintech), Matrix metalloproteinase 9 (MMP 9, 1:1000; Proteintech), Matrix metalloproteinase 13 (MMP13, 1:1000; Proteintech), aggrecan (1:1000; CST), collagen II (1:1000; CST), cleaved caspase-3 (1:1000; CST), Bax (1:1000; CST), Bcl-2 (1:1000; CST), GAPDH (1:2000; Proteintech), Tublin (1:2000; Proteintech), LaminB (1:2000; Proteintech). Membranes were washed with TBS-Tween (0.05%) for 30 min, followed by incubation with anti-rabbit secondary antibody (1:5000; CST) for 2h at room temperature. The protein signals were visualized using Enhanced chemiluminescence Plus (Tanon Science and Technology Co., Ltd.).
+ Open protocol
+ Expand
3

Oridonin and Ferrostatin-1 Protocols

Check if the same lab product or an alternative is used in the 5 most similar protocols
Oridonin (HPLC ≥98%) was purchased from Shanghai yuanye Bio-Technology Co., Ltd. (#B20310), then the drug was dissolved in DMSO and stored in − 20 °C for usage. Ferrostatin-1 (Fer-1) was purchased from MedChemExpress (#HY-100579, MCE), and stored in − 20 °C for usage. All primary antibody used in the experiments included Actin (1:10000, #60008–1-Ig, Proteintech), Bcl-2 (1:1000, #61193, Proteintech), BAX (1:5000, #50599–2-Ig, Proteintech), cl-caspase3 (1:10000, #19677–1-AP, Proteintech), Tublin (1:1000, #66031–1-Ig, Proteintech), GAPDH (1:2000, #CL594–60004, Proteintech), GPX4 (1:5000, #67763–1-IG, Proteintech), SLC7A11 (1:1000, #26864–1-AP, Proteintech), FTH1 (1:5000, #11682–1-AP, Proteintech), and ACSL4 (1:10000, #81196–1-RR, Proteintech), they were stored in − 20 °C for usage. Ferrostatin-1 (Fer-1) (#HY-100579, MCE), an effective ferroptosis inhibitor [32 (link)], was dissolved in dimethylsulfoxide (DMSO) to create stock solutions and stored at − 20 °C.
+ Open protocol
+ Expand
4

Insulin Signaling Pathway Analysis

Check if the same lab product or an alternative is used in the 5 most similar protocols
At the indicated time, C2C12 myotubes were lysed in Radio Immunoprecipitation Assay (RIPA) lysis buffer containing protease and phosphatase inhibitors (Roche, Mannheim, Germany). Protein concentrations were measured with the BCA Protein Assay Kit (Thermo Fisher Scientific, Rockford, USA). Proteins were loaded and separated by 8%-10% (v/v) SDS-PAGE, transferred to polyvinylidene fluoride (PVDF) membrane and blocked with 5% milk. The membrane was incubated with the determined primary antibodies, respectively overnight at 4 °C as follows: Insulin receptor substrate 1 (Irs-1) (1:1000 in dilution, Cat No: 2382; Cell Signaling Technology, Danvers, MA, USA), Phospho-Irs-1(ser307) (1:1000 in dilution, Cat No: 2381; CST), RAC-alpha serine/threonine-protein kinase (Akt)(1:1000 in dilution, Cat No: 4685; CST), Phospho-Akt (Ser473)(1:1000 in dilution, Cat No: 4060; CST), Pgc1α(1:1000 in dilution, Cat No: ab54481; Abcam, Cambridge, UK), Tublin (1:1000 in dilution, Cat No: 10094-1-AP; Proteintech, Rosemont, USA). Then the membrane was incubated with goat anti-rabbit HRP secondary antibody (1:5000 in dilution, CAT: BL003A; Biosharp, Hefei, China). Proteins bands were visualized using a chemiluminescence kit and analyzed using Image J software.
+ Open protocol
+ Expand
5

Western Blot Analysis of Mouse Cortical Samples

Check if the same lab product or an alternative is used in the 5 most similar protocols
Mouse cortical samples were lysed with RIPA containing 1% phenylmethanesulfonyl fluoride (PMSF) (100 mM). The buffered lysis samples were collected into an EP tube and centrifuged at 12,000 rpm at 4 °C for 15 min. The precipitate was discarded and the protein concentration was determined using the BCA Protein Assay Kit (Beijing, China). We performed Western blotting as described previously. In short, proteins were separated and transferred onto a polyvinylidene fluoride (PVDF) membrane (Millipore, MA, USA). The membrane was incubated with primary antibodies overnight at 4 °C. After washing, the membranes were incubated with horseradish peroxidase-conjugated secondary antibodies (Proteintech, Wuhan, China) for 1h at room temperature. Finally, the immunoblots were developed by ECL Western blotting detection reagent (Millipore, USA). The primary antibodies against COX2 (dilution 1:1000, Abcam, Cambridge, UK) DP1 (dilution 1:1000, Abcam, USA) and were purchased from Abcam. DP2 (dilution 1:500, Aiffinity, Changzhou, China) was purchased from Aiffinity. Tublin (dilution 1:5000, Proteintech, China) was purchased from Proteintech.
+ Open protocol
+ Expand
6

Investigating HuR-mediated regulation of lipid metabolism

Check if the same lab product or an alternative is used in the 5 most similar protocols
Bovine serum albumin (BSA, #B2064), oleic acid (OA, #O1008), palmitic acid (PA, #P0500), MG-132(#M7449), chloroquine (CQ, #C6628), actinomycin D (#SBR00013) and TG assay kit (MAK266) were purchased from Sigma. HuR-ARE interaction inhibitor CMLD-2 was purchased from Millipore (#5.38339.0001). The antibodies used were speci c for HuR (Millipore, #07-468), Akt (Cell Signaling Technology, #4691), phospho-Akt at Ser473 (Cell Signaling Technology, #4060), PTEN (Cell Signaling Technology, #9188), Tublin (Proteintech, #11224-1-AP), and GAPDH (Cell Signaling Technology, cat #2118). Lentivirus encoding PTEN (Lenti-PTEN) or Lenti-LacZ were from Jikai (Shanghai, China).
Adenovirus expressing GFP (AdGFP) and HuR (AdHuR) were from Vigenebio (MD, USA). The insulin ELISA kit was from Mercodia (10-1249-01). The assay kits used to measure serum alanine aminotransferase (ALT), aspartate aminotransferase (AST), nonesteri ed fatty acids (NEFAs) and total cholesterol (TC) were purchased from Jiancheng Bioengineering Institute (Nanjing, China).
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!