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4 protocols using accupower cdna synthesis kit

1

Quantifying Cytokine Gene Expression in MSCs

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Total RNA was extracted from MSCs using the EasyBlue RNA isolation reagent (Intron Biotechnology, Sungnam, Korea). cDNAs were synthesized from 2 μg total RNA using the AccuPower cDNA synthesis kit (Bioneer, Daejeon, Korea). Semi-quantitative reverse transcription-polymerase chain reaction (RT-PCR) was performed using the AccuPower PCR premix (Bioneer) in a thermal cycler (Bio-Rad C1000; Bio-Rad, Hercules, CA, USA). The amplified PCR products were electrophoresed on 1% agarose gels containing SybrSafe (Invitrogen, Carlsbad, CA, USA) and analyzed using a fluorescence image analyzer (LAS4000 mini; Fujifilm, Tokyo, Japan). PCR was performed with the following primers: IL-10 (forward 5′-ATCCAAGACAACACTACTAA-3′ and reverse 5′-TAA ATATCCTCAAAGTTCC-3′; product 587 bp) and glyceraldehyde 3-phosphate dehydrogenase (GAPDH; forward 5′-CCACTGGCGTCTTCACCAC-3′ and reverse 5′-CCTGCTTCACCACCTTCTTG-3′; 476 bp). To confirm the expression of ICOSL mRNA, quantitative RT-PCR (qPCR) was performed using the ICOSL TaqMan assay (Assay ID: Hs00323621_m1; Applied Biosystems, Waltham, MA, USA) and the TaqMan Universal PCR Master Mix (Applied Biosystems). The mRNA expression level was normalized to 18S rRNA gene expression (Hs03928985_g1) as an internal control. The qPCR was run on the StepOnePlus real-time PCR System (Applied Biosystems).
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2

Quantifying Cytokine Expression in Nasal Tissue

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The mRNA expression of cytokines in nasal tissue and HNECs was examined using qRT-PCR, as previously described [15 (link)]. Briefly, total RNA was extracted using an easy-BLUE reagent (Intron Biotechnology, Seongnam, Republic of Korea), followed by cDNA synthesis from 2 μg of total RNA using the AccuPower cDNA synthesis kit (Bioneer, Daejeon, Republic of Korea). The cDNA was amplified and quantified on a PCR system using SYBR Green Master Mix (Applied Biosystems, Foster City, CA, USA). The primer sequences used to amplify the specific genes are listed in Supplementary Table S1.
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3

Transcriptional Profiling of Neurotrophin Receptors

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Total RNA was extracted by means of the easyBlue RNA isolation reagent (iNtRON, Sungnam, South Korea). cDNA was synthesized from 1 μg of total RNA using the AccuPower cDNA synthesis kit (Bioneer, Daejeon, South Korea). RT-PCR was carried out with the AccuPower PCR Premix (Bioneer). The amplicons were subjected to electrophoresis in 1% agarose gels containing SYBR Safe (Invitrogen, Carlsbad, CA, USA) and quantified on an LAS4000 mini fluorescence image analyzer (Fuji Photo Film, Tokyo, Japan). The PCR primer sequences are listed in Supplementary Table S1. Glyceraldehyde 3-phosphate dehydrogenase (GAPDH) served as the internal control. Primers for qPCR were purchased from Applied Biosystems (Foster City, CA, USA). The primers were as follows: tropomyosin receptor kinase (Trk) genes TrkA (Hs01021011), TrkB (Hs00178811), and TrkC (Hs00176797), p75 neurotrophin receptor (p75NTR) (Hs00609977), nAChR α7 (Hs04189909), nAChR α5 (Hs00181248), ChAT (Hs00252848), and 18S rRNA (Hs03928985). The qPCR was conducted on a StepOne Real-Time PCR system (Applied Biosystems).
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4

Total RNA Isolation and Gene Expression Analysis

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To isolate total RNA from MSCs, EasyBlue isolation reagent (Intron Biotechnology, Sungnam, Korea) was used according to manufacturer instruction. cDNAs was synthesized from 1 µg of total RNA by the AccuPower cDNA synthesis kit (Bioneer, Daejeon, Korea). The sequences of the primers used in this study was as follows; galectin-1 (Forward 5'-GGTCTGGTCGCCAGCAACCTGAAT-3' and Reverse 5'-TGAGGCGGTTGGGGAACTTG-3'), gaelcin-9 (Forward 5'-CAGGGCGGTTGGGGAACTTG-3' and Reverse 5'-TGAGGCAGTGAGCTTCACAC-3'), IDO (Forward 5'-GGGCAAATGCTATCATTGGAAAA-3' and Reverse 5'-GGTGGCCGGAGAAGAACATT-3') and GAPDH (Forward 5'-CCACTGGCGTCTTCACCAC-3' and Reverse 5'-CCTGCTTCA CCACCTTCTTG-3'). The PCR products were analyzed by resolution on 1% agarose gel followed by fluorescence image analyzer (LAS4000; Fuji Photo-Film, Tokyo, Japan).
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