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Fluorescein sodium salt

Manufactured by Merck Group
Sourced in United States, Germany, Japan, United Kingdom, Italy, Spain, Switzerland, Canada, Sao Tome and Principe, China

Fluorescein sodium salt is a water-soluble dye commonly used in various laboratory applications. It has a bright yellow-green fluorescent color when exposed to ultraviolet or blue light. The compound is frequently employed as a tracer, marker, or stain in research and diagnostic procedures.

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214 protocols using fluorescein sodium salt

1

Octanol-Water Partition Coefficient of Fluorescein

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The octanol/water partition coefficient for FITC was measured at different pH values. Fluorescein sodium salt (Merck) was used due to the poor solubility of FITC in water. Various buffers with a pH range between 5.0 and 9.0 were prepared and mixed with 1‐octanol (Merck). The Fluorescein salt was added to a final concentration of 1.0 mg/mL. After 1 h of mixing at room temperature, a sample of the aqueous phase and one of the octanol phase were measured at 460 nm in an optical reader. The concentration in each phase was determined through a calibration curve at each pH value with the UV absorbance of FITC‐salt. Then, Equation (1) was used to calculate the partition coefficient.
logPow=logci,octanolci,water
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2

Comprehensive Analysis of Bioactive Compounds

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HPLC grade acetonitrile (ACN), methanol, fluorescein sodium salt, Folin-Ciocalteu reagent, n-hexane, ethane, acetone and toluene were purchased from Merck (Darmstadt, Germany). Na2SO4, KOH and sodium phosphate were purchased from Winkler (Winkler®, Santiago, Chile). Na2CO3 was acquired from VWR (Solon, Ohio, USA), while AAPH was obtained from Cayman (Cayman Chemical, Ann Arbor, MI, USA). Trolox, gallic acid and standards minerals and vitamins were purchased from Sigma Aldrich Co. (St. Louis, MO, USA). All chemicals used in the analysis were of analytical grade.
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3

Analytical Standards for Antioxidant Evaluation

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A C7-C40 Saturated Alkanes (1000 g/mL) standard mixture in hexane (49452-U) supplied by Merck Life Science (Merck KGaA, Darmstadt, Germany) was utilized for ALKANEs linear retention indices (LRIs) calculation.
Trolox (6-hydroxy-2,5,7,8-tetramethylchromane-2-carboxylic acid), Gallic acid, AAPH (2,20-azobis(2-amidinopropane) dihydrochloride), fluorescein sodium salt, Folin-Ciocalteu reagent, sodium phosphate monobasic (NaH2PO4) and potassium phosphate dibasic (K2HPO4) were purchased from Merck Life Science (Merck KGaA, Darmstadt, Germany).
LC-MS-grade water, methanol, acetonitrile, and acetic acid were obtained from Merck Life Science (Merck KGaA, Darmstadt, Germany). Gallic acid, protocatechuic acid, isoquercetin, myricetin, and cyanidin were purchased from Merck Life Science (Merck KGaA, Darmstadt, Germany). Stock solutions of 1000 mg L−1 were prepared for each standard by dissolving 10 mg in 10 mL of methanol.
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4

Antioxidant Activity Measurement

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The following reagents were used: 2,20-azobis-2-amidinopropane (AAPH) and fluorescein sodium salt were purchased by Merck (Merck, Germany). Organic solvent for analysis from Merck. Ultra-pure water was prepared by using a PW-Ultra Water System (Heal Force, Shanghai, China).
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5

Characterizing Porous Media Structure

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At the end of each experiment, we created a “mask” image to characterize the porous structure. To this end, we saturated the porous medium with a florescent dye (fluorescein sodium salt, from Merck, visible through a GFP filter cube) and recorded a large image of the entire structure. After thresholding, binarizing the mask image (pore-space: 1; solid-space: 0), we geometrically discretized the two pore classes, TPs and DEPs, using the maximum inscribed circle method described in23 (link). From the binary image we obtained then the skeleton, a 1-pixel width representation of the pore space (Supplementary Fig. S7a). We assigned a segregation index (ζ) to the pore-regions based on the number of neighboring grains. Hence, a segregation index (ζ) of 1 has distinguished the dead-end pores from the transmitting pores with ζ > 1. This characterization allowed to generate a “mapped mask”, where grains have been attributed a pixel value of 0, dead-end pores a pixel value of 1, and transmitting pore a pixel value of 2 (Fig. 1d, gray, red and cyan, respectively). The medium is quite homogeneous, such that the statistical distribution of λ is narrow and has a strong peak close to the mean pore-size λm = 0.04 mm (Supplementary Fig. S7b).
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6

Extraction and Characterization of Crayfish Exoskeletons

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The Parastacus pugnax crayfish exoskeletons were provided by “Cooperativa Agricola Cacike Juan Currimil de Lolocura Ltd.a.” (Carahue, La Araucanía, Chile). Commercial chitosan was purchased from a local supplier (Citrex, La Cruz, Chile) and used as a control in this study. NaOH, HCl, ethanol, NaCl, ascorbic acid and acetic acid were acquired from Sigma-Aldrich (São Paulo, Brazil), while trichloroacetic acid, Trolox reagent, fluorescein sodium salt, Bradford reagent, Methyl orange reagent were purchased from Merck (Darmstadt, Germany). Na-phosphate buffer was purchased from J.T. Baker (Deventer, The Netherlands); AAPH from Cayman Chemical (Ann Arbor, MI, USA); DPPH reagent from Calbiochem (Darmstadt, Germany); Lactic acid from Sabores (Santiago, Chile); L-ascorbic acid from Mallinckrodt (Phillipsburg, NJ, USA); Na-phosphate buffer from J T Baker (Deventer, The Netherlands); and technical Acetone from HES (Santiago, Chile).
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7

Synthesis and Characterization of ZnO Nanostructures

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Zinc acetate dihydrate (Zn(CH3COO)2·2H2O ≥ 99%,Acros) and citric acid anhydrous (C6H8O ≥ 99.5%, Fisher scientific), Dyes: Rhodamine B ≥ 95% (HPLC), Merck) and Fluorescein sodium salt ≥ 97.5% zHPLC),Merck).The solvent used is deionized (DI) Milli-Q water. The UV–Vis absorption spectra of the prepared samples was measured using a double beam spectrophotometer (Cary 5000 UV–Vis-NIR, Agilent Technologies). The FTIR spectra were collected using a FTIR spectrometer (Vertex 70, Bruker, Germany). XRD of the as-prepared Zinc-Citrate precursor and ZnO samples were characterized using a Malvern Panalytical Empyrean 3 diffractometer. The morphology and particle size of the samples were determined by FESEM, (Quattro S, Thermo Scientific).
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8

Synthesis and Characterization of Polymer Biomaterials

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Calcium hydroxide (Ca(OH)2, 98%) and orthophosphoric acid (H3PO4, 85%) were purchased
by Carlo Erba Reagents (Carlo Erba Reagents, Milano, Italy). ε-Caprolactone
(CL, 99%) and 1,5,7triazabicyclo[4.4.0]dec-5-ene (TBD, 95%) were purchased by Sigma-Aldrich, Germany. Arabic gum (AG) was
kindly gifted from the research group of Prof. Ciofani from Scuola
Superiore di Studi Universitari e Perfezionamento Sant’Anna,
CRIM Lab-Center for Applied Research in Micro and Nano Engineering.
Jeffamine (Elastamine RE-2000) was sold by Huntsman Corporation (Woodlands,
Texas, USA). Polyethylene glycol 8000 (PEG8000, MW = 8 kDa), carbodiimidazole
(CDI, 98%), deuterium oxide (99.9 atom %
D), PBS (Dulbecco’s phosphate-buffered saline solution pH =
7.4, 0.1 M), ethosuximide (Etho, MW = 141.168 g/mol),
and dimethyl fumarate (DMF, MW = 144.127 g/mol) were purchased from
Sigma-Aldrich, Germany. Fluorescein sodium salt (SF, MW = 412.3 g/mol)
and rhodamine B (RhB, MW = 479.02 g/mol) were purchased from Merck
(Deisenhofen, Germany). All reagents and solvents were used without
further purification. Solvents were of analytical laboratory grade.
Synthetized products were stored at 4 °C in the dark until used.
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9

Validating Fabricated Microfluidic Chip Performance

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The performance of the fabricated MCD was validated using epifluorescence microscopy (Nikon Ti-E) with an aqueous fluorescent dye (fluorescein sodium salt, Sigma) in various concentrations (described below). Images of the dye distribution were captured at the midplane of the channels with a sCMOS camera (Zyla 5.5; Andor Technology). Fluorescein was chosen due to its similar diffusion coefficient with the chemostimulant serine (Altindal et al., 2011 (link)). Minor deviations in the performance of the MCD from the original circuit design (Figure 1—figure supplement 1) are likely due to variations in the fabricated channel mold heights (Appendix 1). Such variations impact the hydraulic resistances (Oh et al., 2012 (link)) and symmetry of the cell solution (Figure 1—figure supplement 3).
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10

Antioxidant Analysis of Bread Samples

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Folin–Ciocalteu reagent solution (2 N), 1,1-diphenyl-2-picrylhydrazine (DPPH, 95%) (powder), Trolox (97%), 2,2′-azobis (2-amidinopropane) dihydrochloride (AAPH, 95%) (powder), and ethanol solution (99.5%) were purchased from Wako Chemicals Ltd. (Osaka, Japan). Fluorescein sodium salt (1 mg/mL in pure water) was purchased from Sigma-Aldrich (St. Louis, MO, USA). Catechin (CTN) (>98%, powder) was purchased from Funakoshi Corporation (Tokyo, Japan). STC, DPPH, and hydrophilic oxygen radical absorbance capacity (H-ORAC) values of the bread samples were determined. Samples were extracted in 60% ethanol at 40 °C for 2 h while being subjected to shaking. The STC of the extracts was measured using the Folin–Ciocalteu method [9 (link)]. The STC was expressed as mg equivalent/100 g of dry matter using CTN as the standard (mg CTN eq/100 g DW). The antioxidant activity of the extracts was analyzed using the DPPH [22 (link)] and H-ORAC assays [23 (link)]. The DPPH and H-ORAC values were expressed in µmol Trolox equivalent/g of DW (µmol TE/g DW). For STC and all antioxidant activity assays, extraction was performed twice per treatment, and measurements were obtained in triplicate per extraction.
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