The largest database of trusted experimental protocols

5 protocols using ma3 926

1

Western Blot Analysis of Cardiac Proteins

Check if the same lab product or an alternative is used in the 5 most similar protocols
Western blot analysis was performed on heart homogenates from NHPs and Amy-KO mice, and cell lysates from isolated RVCMs and hiPSC-CMs. Primary antibodies were mouse anti-HIF1α (1:1000, ab16066, Abcam, Cambridge, UK), rabbit anti-PFKFB3 (1:1000, ab181861, Abcam, Cambridge, UK), rabbit anti-phospho461-PFKFB3 antibody (1:1000, ab202291, Abcam, Cambridge, UK), rabbit anti-AMPKα antibody (1:1000, 2532S, Cell Signaling Technology, Danvers, MA), rabbit anti-PKCα antibody (1:1000, 2056S, Cell Signaling Technology, Danvers, MA), rabbit anti-PKA C-α antibody (1:1000, 4782S, Cell Signaling Technology, Danvers, MA), mouse anti-SERCA (1:1000, MA3-919, Thermo Fisher, Waltham, MA), mouse anti-NCX (1:1000, MA3-926, Thermo Fisher, Waltham, MA), rabbit anti-phospholamban (1:1000, PA5-82945, Thermo Fisher, Waltham, MA), and mouse anti-GAPDH (1:10000, MA515738, Thermo Fisher, Waltham, MA) antibodies as described previously23 (link).
+ Open protocol
+ Expand
2

Molecular Profiling of Cardiac Calcium Handling Proteins

Check if the same lab product or an alternative is used in the 5 most similar protocols
Homogenates were prepared from the left atrial or cell samples and lysed using mixed cell lysates (RIPA: PMSF: phosphatase inhibitor cocktail = 100: 1: 1, Solarbio, China). Protein concentration was measured using a BCA assay kit (PC0020, Solarbio, China). Mini-PROTEAN Tetra (Bio-rad) electrophoresis was performed with 20 μg of protein loaded onto a 10% SDS-PAGE gel (80 V, 140 min). Proteins were transferred on PVDF membranes by wet transfer (300 mA, 90 min). The blocking process was performed in 5% BSA blocking solution at room temperature for 1 h, while the PVDF membranes were incubated with the primary antibodies overnight at 4°C. The following primary antibodies were utilized: anti-CaMKII (PA5-22168, Thermo Fisher, U.S.A.); anti-phospho-CaMKII (LS-C354565, Lifespan, U.S.A.); anti-RyR2 (MA3-916, Thermo Fisher, U.S.A.); anti-phospho-RyR2 (LS-C358303, Lifespan, U.S.A.); anti-SERCA (MA3-910, Thermo Fisher, U.S.A.); anti-PLB (MA3-922, Thermo Fisher, U.S.A.); anti-phospho-PLB (ab15000-50, Abcam, U.S.A.); NCX (MA3-926, Thermo Fisher, U.S.A.); and GAPDH (ab125247, Abcam, USA).
+ Open protocol
+ Expand
3

Immunolabeling of Calcium Signaling Proteins

Check if the same lab product or an alternative is used in the 5 most similar protocols
Cells cultured on glass coverslips were washed once with Dulbecco's phosphate buffered saline (PBS, Sigma-Aldrich, MO, USA), fixed with 4% paraformaldehyde (in PBS) for 5 min and permeabilized with 0.5% Triton-X (in PBS) (Sigma-Aldrich, MO, USA) for 10 min. Coverslips were washed twice with PBS for 5 min after which they were incubated with blocking buffer [PBS (10% FBS, 0.05% Triton-X)] for 1 h. After blocking, cells were incubated with primary antibody in blocking buffer for 1 h, washed, and incubated with secondary antibody in blocking buffer for 1 h. All labeling steps were performed at room temperature. Nuclei were stained with 14.3 μM DAPI (Thermo Fisher Scientific, MA, USA). Primary antibodies used were: Serca2 ATPase (mouse monoclonal, ab2861, Abcam, UK) (1:500 dilution), Ryanodine receptor (mouse monoclonal, ab2827, Abcam, UK) (1:100), IP3 receptor type 1 (rabbit polycolonal, ab111087, Abcam, UK) (1:100) and Sodium/calcium exchanger (mouse monoclonal, MA3-926, Thermo Fisher Scientific, MA, USA) (1:100). Secondary antibodies were, anti-Mouse IgG (goat polyclonal, A11001, Thermo Fisher Scientific, MA, USA) (1:750) and anti-Rabbit IgG (goat polyclonal, A21245, Thermo Fisher Scientific, MA, USA) (1:750).
+ Open protocol
+ Expand
4

Western Blot Analysis of Ion Transporters

Check if the same lab product or an alternative is used in the 5 most similar protocols
The A549 cells were lysed using RIPA buffer (Invitrogen, USA). The BCA assay (Sigma-Aldrich) was performed at a 562 nm absorbance to determine protein concentration. Protein (40 μg) was analyzed by 7.5% SDS-PAGE and then electrophoresed onto a PVDF membrane. The PVDF membrane was incubated with primary antibodies for 1 d. Primary antibodies to β-actin (1:1000, 4970S, Cell Signaling Technology, Danvers, MA, USA), TRPV6 (1:1000, ACC-036, Alomone Labs, Jerusalem, Israel), NCX1 (1:500, MA3-926, Thermo Fisher Scientific, MA, USA), and PMCA1 (1:1000, Swant, Marly, Switzerland) were used. After incubation with primary antibodies, membranes were treated with secondary antibodies (anti-rabbit, 1:3000, Cell Signaling Technology; anti-mouse, 1:3000, Cell Signaling Technology) for 1 h at room temperature. The membrane was then washed with 1× TBS-T three times each for 10 min at room temperature. An ECL solution using Chemi Doc, GenGnome 5 (Syngene, Cambridge, UK) was used to confirm antibody binding. Image J v1.37 software (Wayne Rasband, NIH, Bethesda, MD, USA) was used for target band analysis.
+ Open protocol
+ Expand
5

Quantitative Analysis of Cardiac Proteins

Check if the same lab product or an alternative is used in the 5 most similar protocols
Atrial tissue was collected and homogenized as described previously (Alvarado et al., 2017 (link)), in a buffer containing 0.9% NaCl, 10 mM Tris-HCl pH 6.8, 20 mM NaF and protease inhibitors. Equal amounts of protein, as determined by Bradford assay, were loaded. 50 µg of tissue homogenate, in Laemmli buffer, was separated by SDS-PAGE in 4–20% TGX or AnyKD precast gels (Bio-Rad). Proteins were transferred to PVDF membrane using the iblot2 transfer system (ThermoFisher) or wet transfer. Primary antibodies were as follows: anti-RyR2 (1:2000; MA3-925, ThermoFisher), SERCA2 (1:1000; MA3-919, ThermoFisher), NCX (1:1000; MA3-926, ThermoFisher), PLN (1:5000; A010-14, Badrilla), pT17-PLN (1:5000; A010-13, Badrilla), pS16-PLN (1:5000; A010-12, Badrilla), Cav1.2 (1:200; ACC-003, Alomone), GAPDH (1:10000; MAB374, Millipore). Secondary antibodies were: goat anti-mouse-HRP (1:5000; 31437, ThermoFisher) or goat anti-rabbit-HRP (1:5000; 31463, ThermoFisher). Secondary antibody concentrations were 5x higher when using the ibind Flex system. SuperSignal ECL reagent (ThermoFisher) was used to develop membranes followed by imaging with a ChemiDoc MP apparatus (Bio-Rad). Band intensities were quantified with the ImageLab software (Bio-Rad) or using ImageJ (NIH).
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!