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Hiscript 2 q rt supermix for qpcr gdna wiper kit

Manufactured by Vazyme
Sourced in China, United States

The HiScript II Q RT SuperMix for qPCR (+gDNA wiper) kit is a reverse transcription and real-time PCR reaction system. It combines reverse transcription and real-time PCR in a single step, enabling efficient and accurate gene expression analysis.

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93 protocols using hiscript 2 q rt supermix for qpcr gdna wiper kit

1

RNA Extraction and cDNA Synthesis Workflow

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Total RNA was extracted using the TRIzol reagent (Vazyme, Nanjing, China) according to the manufacturer’s instructions; RNA quality and concentration were determined by a spectrophotometer. RNA with an OD260/280 ratio between 1.9 and ~2.2 was considered satisfactory and was used for subsequent analysis. For RT-PCR, 1 μg RNA was converted to cDNA with a total reaction volume of 20 μL using the HiScript II Q RT Supermix for qPCR (+gDNA wiper) Kit (Vazyme) according to the manufacturer’s protocol. Reverse transcription was performed using the HiScript II Q RT Supermix for qPCR (+gDNA wiper) Kit (Vazyme). An amount of 1 μg RNA was used in the reverse transcription system for each sample stimulated by V. anguillarum and copper ions in a total reaction volume of 20 μL. In the first step, genomic DNA was removed and the reaction consisted of: 4 μL 4× gDNA wiper Mix, 1 μg RNA, RNase-free ddH2O added to 16 μL, 42 °C for 2 min; the second step was a reverse transcription system: 5× Hiscript III qRT SuperMix 4 μL with the reaction solution from the first step, 37 °C for 15 min, 85 °C for 5 s. The product was used immediately for subsequent experiments.
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2

Quantitative Real-Time PCR Protocol

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Total RNA extraction was performed using the TransZol kit (TransGen Biotech, Inc., Beijing, China), and cDNA synthesis was carried out using the HiScript® II QRT SuperMix for qPCR (+gDNA wiper) kit from Vazyme (Piscataway, NJ, USA). The LightCycle * 96 Real-Time PCR System from Roche (Basel, Switzerland) was employed for qRT-PCR experiments. A 50 μL reaction system was configured, and each sample underwent three biological repeats with three technical repeats. The HiScript® II Q RT SuperMix for qPCR (+gDNA wiper) kit from Vazyme (Piscataway, NJ, USA) was utilized for reverse transcription. Relative expressions were calculated using the 2−ΔΔCt formula. Primers for VfBBXs and the actin EF1α gene are detailed in Table S3. All data are expressed as mean ± SDs (Student’s t-test; * p < 0.05, ** p < 0.01, and *** p < 0.001 considered statistically significant).
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3

Fungal Gene Expression Analysis by qRT-PCR

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Total RNA extracted from the indicated mycelia or fruiting bodies using a spin column fungal total RNA purification kit (Sangon Biotech) was used to synthesize first-strand cDNA using a HiScript II Q RT Supermix for qPCR kit (+ gDNA wiper) (Vazyme), and the resulting cDNA was used for qRT-PCR analysis using a pair of specific primers for each gene (see Table S2) and AceQ qPCR SYBR green Master Mix (Vazyme) (20 (link)). The gene expression levels were normalized to β-tubulin, and the fold expression of target genes relative to β-tubulin was calculated according to the 2−ΔCT method as follows: −ΔCT = −(CT target − CT β-tubulin).
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4

Quantitative Gene Expression Analysis of Geobacillus

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To examine the expression profiles of the differentially expressed genes, total RNAs were extracted from Geobacillus sp. E263 using TransZol Up Plus RNA kit (TransGen Biotech, Beijing, China), followed by the synthesis of cDNA with HiScript II Q RT SuperMix for qPCR kit (+ gDNA wiper) (Vazyme, Nanjing, China). Quantitative real-time PCR was performed with gene-specific primers (universal stress protein, 5′-TGCTATTGATGGTTCCAAAG-3′ and 5′-GCTCCGTAAATCAATGACG-3′; ribosome-associated translation inhibitor RaiA, 5′-TTTGAGATTGTCCGCACG-3′ and 5′-ACACGATGTTTGTGCGGT-3′; DoxX family protein, 5′-GGATTTGACGCAACAGGA-3′ and 5′- CACTA ACACATTGAACACCTCG-3′; alcohol dehydrogenase AdhP, 5′-GCACCTGCCGATTATGTC-3′ and 5′-TCCGTAAATGGCTA CCCA-3′; 30S ribosomal protein S4, 5′-TGGTCCAAGTCA ACGCAG-3′ and 5′-CCGTGTTTACCAGGCATT-3′). The Hieff qPCR SYBR Green Master Mix (Yeasen Biotechnology, Shanghai, China) was used in quantitative real-time PCR.
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5

Quantifying Tomato Gene Expression

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The sequences of candidate genes were retrieved from the ITAG 4.1 database (Sol Genomics Network). Specific primer pairs used in qRT-PCR were designed using NCBI Primer-Blast3 (Supplementary Table 1). Total RNA from four-week-old tomato leaves that were treated with different Pst mutants was isolated with an OminiPlant RNA Kit (Cwbiotech, Beijing, China), and then reverse-transcribed using HiScript® II Q RT SuperMix for qPCR kit (+ gDNA wiper) (Vazyme Biotech, Nanjing, China) according to the manufacturer’s protocol. qRT-PCR was performed on a LightCycler® 96 real-time PCR system (Roche, HongKong, China) using a SYBR Green Master Mix (Vazyme Biotech, Nanjing, China) according to the manufacturer’s instructions. Three biological and three technical replicated were conducted. The actin and ubiquitin genes were used as internal references.
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6

Quantitative Gene Expression Analysis

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Total RNA was extracted from the apical region of the stipe using the Spin Column Fungal Total RNA Purification Kit (Sangon Biotech, Shanghai, China). First-strand cDNA was synthesized from total RNA using the HiScript II Q RT Supermix for qPCR Kit (+gDNA wiper) (Vazyme, Nanjing, China), and quantitative real-time PCR (qRT–PCR) analysis was conducted using a pair of specific primers for each gene (Table S1) and AceQ qPCR SYBR Green Master Mix (Vazyme, Nanjing, China). The gene expression levels were normalized to β-tubulin, and the fold expression of target genes relative to β-tubulin was calculated according to the 2−ΔΔCT method [8 (link)].
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7

Quantifying Gene Expression in Lilium Cultivars

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The sequences of candidate genes were retrieved from the L. japonica genome database. Specific primer pairs used in qRT-PCR were designed using NCBI Primer-Blast14 (Supplementary Table 1). Total RNA of LJFs at the silver stage of ‘Yujin2’ and ‘Fengjin1’ was isolated using the OminiPlant RNA Kit (Cwbiotech, Beijing, China) and then reverse-transcribed using a HiScript® II Q RT SuperMix for qPCR kit (+ gDNA wiper; Vazyme Biotech, Nanjing, China). qRT-PCR was performed on a LightCycler® 96 real-time PCR system (Roche, Hong Kong, China) using SYBR Green Master Mix (Vazyme Biotech, Nanjing, China; Yu et al., 2021 (link)). Three biological and three technical replicates were performed. Relative expression levels were calculated using the 2–ΔΔCt method (Liu et al., 2019 (link)). The Lonja.ACT2/7 and Lonja.27738 genes were used as internal references (Liu, 2017 ).
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8

Quantitative Real-Time PCR Analysis

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Total RNA was extracted with Trizol reagent (Life Technologies). cDNA was prepared by HiScript II Q RT SuperMix for qPCR (+gDNA wiper) kit (Vazyme) and Quantitative Real‐Time PCR analysis was performed using ChamQ Universal SYBR qPCR Master Mix (Vazyme) under the following conditions: 5 min at 95 °C followed by 40 cycles at 95 °C for 30 s, 60 °C for 40 s, and 72°C for 1 min using a Roche LightCycler 96. The data of each experiment was normalized to the expression of control gene (β‐Actin) and represented in the manner of mean ± SD.
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9

RNA Extraction and qRT-PCR Analysis

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Total cellular RNA was extracted using TRIzol Reagent (Life Technologies, 15596018) following the manufacturer's instructions. A reverse transcription reaction was performed to produce complementary DNAs by using a HiScript II Q RT Supermix for qPCR (+gDNA wiper) kit (Vazyme Biotech, R223). The complementary DNAs were subjected to quantitative real-time PCR (qRT-PCR) using an AceQ qPCR SYBR Green Master Mix Kit (Vazyme Biotech, Q111) and an ABI StepOne Plus Real-time PCR instrument (Applied Biosystems). Relative quantification of gene expression was based on the threshold cycle (Ct), with Gapdh or β-actin mRNA as the internal control. Data were normalized to a control value of 1 and presented as a fold change (FC). The primers used for qRT-PCR are provided in Table S4.
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10

RNA Extraction and qPCR Analysis

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DNA‐free RNA was obtained using the Rneasy Plus Micro Kit (QIAGEN) with DNase treatment, and total RNA was reverse transcribed using a Hiscript II Q RT SuperMix for qPCR (+gDNA wiper) Kit (Vazyme, Nanjing, China). Real‐time PCR was performed in triplicate using ChamQ Universal SYBR qPCR Master Mix and the QuantStudio1 Real‐Time PCR System (Applied Biosystems, Foster City, CA) following the manufacturer's protocol. Gene expression was normalized relative to the gene expression levels of hypoxanthine guanine phosphoribosyl transferase (Hprt). The following primers are shown in Table S11 (Supporting Information).
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