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7 protocols using 7 aminoactinomycin d 7 add

1

Characterizing Mouse and Human NK Cell Populations

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The following Abs against mouse molecules were purchased from Miltenyi Biotec Inc. (Bergisch Gladbach, Germany): CD3-fluorescein isothiocyanate (FITC), NK1.1-peridine-chlorophyll-protein (PerCP)-Vio700, CD11b-allophycocyanin (APC)-Vio770, CD27-phycoerythrin (PE)-Vio770, NKG2D-APC, NKp46-PE-Vio770, KLRG1-PE, Ly49D-PE, CD4-PerCP-Vio700 and CD8a-APC for mouse molecules, and CD56-FITC, CD107a-PE and IFN-γ-APC for human molecules. We purchased 7-amino-actinomycin D (7-ADD) and FITC-conjugated annexin V from BD Biosciences (San Jose, CA, USA). Flow cytometric analysis was performed using a Cytoflex flow cytometer (Beckman Coulter, Inc., Brea, CA, USA) and data analyses were performed using the CytExpert software (Beckman Coulter, Inc.).
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2

Annexin V/PI-based Apoptosis Assay

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Apoptosis of KHYG1 was evaluated by cytometric analysis of Annexin V and Propidium Iodide (PI)-stained cells using fluorescein isothiocyanate (FITC) Annexin V Apoptosis Detection kit I (BD). NK cells isolated from NK-CLPD samples were firstly labeled with anti CD56 PE and CD16 allophycocyanin (APC), than labeled with Annexin V and 7-Amino-Actinomycin D (7ADD, BD) to evaluate apoptosis. Stained cells were acquired using FACSCalibur flow cytometer and analyzed by CellQuest Pro software (BD). Single positive for Annexin V and double positive for Annexin V and PI/7ADD cells were interpreted as signs of early and late phases of apoptosis respectively.
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3

Flow Cytometric Analysis of Immune Cells

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The following Abs against mouse molecules were purchased from Miltenyi Biotec Inc. (Bergisch Gladbach, Germany): CD3-FITC, NK1.1-PerCP-Vio700, CD11b-allophycocyanin (APC)-Vio770, CD27-PE-Vio770, CD107a-APC, IFN-γ-PE, CD4-PerCP-Vio700, and CD8a-APC. 7-Amino-actinomycin D (7-ADD) and FITC-conjugated annexin V were purchased from BD Biosciences (San Jose, CA, USA). Flow cytometric analysis was performed using a Cytoflex flow cytometer (Beckman Coulter, Inc., Brea, CA, USA) and data analysis was performed with CytExpert software (Beckman Coulter, Inc.).
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4

Analysis of Cell Growth and Cycle

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For analysis of cell growth curve, cells were seeded into 12-well plates at the initial density of 2 × 104 cells/well. The cells were then harvested every 24 h until 96 h and cell numbers were counted by trypan blue exclusion assay. For cell cycle analysis, cells were seeded into 6-cm dishes at the initial density of 2 × 105 cells/dish. Before cell harvesting, 10 μM BrdU was added to dishes and incubated at 37 °C for two h. The harvested cells were then fixed, permeabilized, and incubated with anti-BrdU- fluorescein isothiocyanate (FITC) antibody according the manufacturers’ protocol (BD Biosciences, San Jose, CA, USA). Before fluorescence-activated cell sorting (FACS) analysis, the cells were stained with 7-aminoactinomycin D (7-ADD) (BD Biosciences) on ice for 10 min. The fluorescence signals were detected by Epics XL flow cytometry (Beckman Coulter, Inc., Atlanta, GA, USA) and data were analyzed by WinMDI software (J. Trotter, Scripps Research, La Jolla, CA, USA).
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5

Multiparameter Flow Cytometry of Immune Cells

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The used antibodies include: CD34 (FITC, clone 8G12, BD Bioscience) (5 μL/1× 106 cells), CD3 (PE/CY5, UCHT1, BioLegend) (2 μL/1× 106 cells), CD56 (FITC, clone 3G8, BD Bioscience) (2 μL/1× 106 cells), CD57 (FITC) (4 μL/1× 106 cells) and CD105 (FITC) (4 μL/1× 106 cells). Flow cytometry was performed on day 15. Briefly, the collected cells were centrifuged at 300 g and washed twice with cold PBS plus 5% FBS (staining buffer). Then the cells spun down and were re-suspended in 50 μL of staining buffer. After adding the appropriate volume of antibodies, the cells were incubated in 4°C in the darkroom. Following 20-30 minutes incubation, the stained cells were washed with 1ml of staining buffer to remove unbounded antibodies. Finally, the cells were re-suspended in 500 μL of staining buffer and were evaluated by flow cytometry. 7-Amino-actinomycin D (7ADD, (5 μL/1 × 106 ells, BD Bioscience) were used for excluding dead cells. Approximately, 10 000 to 30000 events were tracked for each samples by using BD caliber (BD eBioscience) and data were analyses by FlowJo (7.6.1) software.
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6

Annexin V Apoptosis Assay by Flow Cytometry

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Annexin V staining were performed and acquired via flow cytometry according to the manufacturers’ instructions. The PDL Cells were stained with PE-conjugated annexin-V and 7-aminoactinomycin D (7-ADD) (BD Biosciences; San Jose, CA, USA) in the binding buffer in the presence of Ca2+ for 15 min. The cells were then harvested by mechanical scraping and analyzed using a FACS Canto cytometer (BD Biosciences).
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7

Quantifying Tumor Metastasis via Flow Cytometry

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Flow cytometry was performed to test the tumor cells migrated to draining lymph nodes, the diLNs and dpLNs were removed from footpad tumor-bearing mice after the euthanize was performed. Then, all lymph nodes were ground separately and digested with collagenase in a 37°C incubator for 20 minutes. The concentration of collagenase was 1 mg/ml. Collagenase was neutralized with DMEM media, and the liquid with lymph node tissue was filtered. 5 × 105 cells from each cell suspension were stained with 7-amino-actinomycin D (7-ADD, 0.25 µg/105 cells, BD Bioscience) to eliminate dead cells before flow cytometry. Equal amounts of cells (50,000) were harvested from the suspension of each sample by FACS (Becton, Dickinson and Company, USA). The GFP positive cells were tumor cells migrated from tumor tissues to lymph nodes. The percentage of GFP positive cells may represent the metastasis of tumor.
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