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8 protocols using cxcl8 il 8

1

Neutralization Assay for CXCL1, IL-8, and IL-18

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The CXCL1 antibody (9µg/mL; cat. no. MAB275; R&D SYSTEMS, Minneapolis, MN, USA), IL-8/CXCL8 (0.4µg/mL; cat. no. MAB208; R&D SYSTEMS, Minneapolis, MN, USA), and IL-18 (1.2µg/mL; cat. no. AF2548; R&D SYSTEMS, Minneapolis, MN, USA) were used for the neutralization assay. The normal mouse IgG1 antibody (1 µg/mL; cat. no. sc-3877; Santa Cruz Biotechnology, Inc., Dallas, TX, USA) was used as the control antibody. The experiment was conducted in the same manner as the cell culture environment, and the subsequent experiments or results were performed/obtained after 24–48 h.
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2

Comprehensive Protein Expression Analysis in Cell Signaling

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Antibodies against RanBP1 (cat. no. 8780; Cell Signaling Technology, Inc., Danvers, MA, USA), CD44 (cat. no. 3570; Cell Signaling Technology, Inc., Danvers, MA, USA), Sox2 (cat. no. 3579; Cell Signaling Technology, Inc., Danvers, MA, USA), Oct-4 (cat. no. 2750; Cell Signaling Technology, Inc., Danvers, MA, USA), Nanog (cat. no. 4893; Cell Signaling Technology, Inc., Danvers, MA, USA), β-actin (cat. no. sc-47778; Santa Cruz Biotechnology, Inc., Dallas, TX, USA), ZEB1 (cat. no. sc-25388; Santa Cruz Biotechnology, Inc., Dallas, TX, USA), SLUG (cat. no. sc-166476; Santa Cruz Biotechnology, Inc., Dallas, TX, USA), SNAIL (cat. no. sc-10432; Santa Cruz Biotechnology, Inc., Dallas, TX, USA), Twist (cat. no. sc-15393; Santa Cruz Biotechnology, Inc., Dallas, TX, USA), ALDH1A1 (cat. no. ab6192; Abcam, Cambridge, UK), ALDH1A3 (cat. no. ab129815; Abcam, Cambridge, UK), E-Cadherin (cat. no. ab15148; Abcam, Cambridge, UK), CD133 (cat. no. ab19898; Abcam, Cambridge, UK), N-Cadherin (cat. no. 610920; BD Transduction, San Diego, CA, USA), Vimentin (cat. no. MA5-14564; Invitrogen, Waltham, MA, USA), CXCL1 (cat. no. PA5-115328; Invitrogen, Waltham, MA, USA), IL-8/CXCL8 (cat. no. MAB208; R&D SYSTEMS, Minneapolis, MN, USA), and IL-18 (cat. no. AF2548; R&D SYSTEMS, Minneapolis, MN, USA) were used for Western blot analysis and Immunocytochemistry assays.
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3

Quantifying ESCC Cell Secreted MMP9 and IL-8

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ESCC cells were resuspended in RPMI-1640 without FBS and seeded at a density of 1.0 × 106 cells/3 mL for TE-9 and TE-10 cells, and 1.7 × 106 cells/3 mL for TE-11 cells in a 6-cm dish. The cells were cultured for 24 h and the culture supernatants were harvested as described in the cytokine array section. The Quantikine® ELISA Human MMP9 (#DMP900, R&D Systems) or IL-8/CXCL8 (#D8000C, R&D Systems) immunoassay was used to measure the harvested culture supernatants. The culture supernatants of ESCC cells after STAT3 knockdown or treatment with recombinant human proteins were also processed as described above and used for MMP9 ELISA. The optical densities were measured using the Microplate Reader Infinite® 200 PRO (Tecan, Männedorf, Switzerland).
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4

Analyzing Chemokine Signaling Pathways

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Human recombinant CCL2/MCP-1, CCL20/MIP-3α and CXCL8/IL-8 proteins, and polyclonal antihuman CCL2/MCP-1, CCL20/MIP-3α and CXCL8/IL-8 antibodies were obtained from R&D Systems (Minneapolis, MN, USA). Control nonspecific IgG from goat serum was purchased from Sigma-Aldrich, Co. (St. Louis, MO, USA). The NF-κB inhibitor BAY 11-7092, c-Jun N-terminal Kinase (JNK) inhibitor SP600125, p38 inhibitor SB203580 and were purchased from Sigma-Aldrich, Co. Extracellular signal-regulated Kinase (ERK) inhibitor PD98059 was obtained from Merck (Darmstadt, Germany). Exo-mCherry (mChrry-loaded exosome) and Exo-srIκB (srIκB-loaded exosome) were obtained from Cellex Life Sciences Inc. (Daejeon, Korea) [32] .
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5

Stool Microbiome and Inflammation Protocol

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A stool sample is collected on all subjects at baseline, 4 weeks, and 8 weeks, to determine the presence of C. difficile in qualitative stool cultures, using broth enrichment followed by culture on Clostridium difficile Brucella Agar. Toxin quantitation is done using an ELISA methodology (tgcBIOMICS). Fecal cytokines are assayed using an ELISA. The following cytokines are examined: CXCL-5/ENA-78, and CXCL-8/IL-8 (Quantikine R&D Systems, Minneapolis, MN). This kit is validated for feces using a protocol obtained from R&D Systems. Fecal lactoferrin are measured by the commercial IBD-Scan test (TechLab, Blacksburg, VA) in a quantitative manner.
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6

Endothelial Cell Adhesion Molecule Assay

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Recombinant human ICAM-1-Fc, E-selectin-Fc, and CXCL8/IL-8 were purchased from R&D Systems (Minneapolis, MN; Catalog No. 720-IC, 724-ES, and 208-IL respectively). Protein A/G was purchased from Fischer Scientific (Pittsburgh, PA). BS3 crosslinker, Alexa Fluor 488 Phalloidin and Vybrant DiI Cell-Labeling solution was purchased from life technologies (Grand Island, NY). Antibodies used in flow cytometry, FITC mouse anti-human CD106 (VCAM-1), PE-Cy5 mouse anti-human CD62E (E-selectin), and PE-Cy5 mouse anti-human CD54 (ICAM-1) were purchased from BD Biosciences (San Jose, CA) while Alexa Fluor 488 mouse anti-human CD11a/CD18 (mAb24, LFA-1), PE mouse anti-human CD162 (PSGL-1), and PE-Cy5 mouse anti-human CD62L (L-selectin) were purchased from Biolegend (San Diego, CA). Antibodies were used at a saturating concentration of 5 μg/ml or per manufacturer’s instruction. Human atrial natriuretic peptide (ANP) was purchased from BACHEM (Torrance, CA). Normal human primary umbilical vein endothelial cells (HUVEC) were purchased from ATCC (Manassas, VA). Recombinant human IL-1β was purchased from eBioscience (San Diego, CA).
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7

Cytokine Quantification by ELISA

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Cell-free culture supernatants were analyzed directly or stored at −80 °C. ELISA Duoset kits for TNF-α (assay detection range 15.6–1000 pg/mL), IL-1β (assay detection range 3.91–250 pg/mL), IL-6 (assay detection range 9.38–600 pg/mL), and CXCL8/IL-8 (assay detection range 31.3–2000 pg/mL) were purchased from R&D Systems, Minneapolis, MN, USA and used according to the manufacturer’s instructions. Plates were analyzed by using a microplate reader Infinite M200 (Tecan, Männedorf, Switzerland), measuring absorbance at 450 nm with the reference wavelength at 540 nm. All measurements were performed in duplicates with samples from seven independent donors.
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8

Quantifying Plasma Cytokine Profiles

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The concentrations of 9 parameters, including cytokines and chemokines present in the plasma samples, were estimated using ELISA kits, in accordance with the manufacturer’s instructions. The cytokines/chemokines that were assayed included IFN-γ (cat. 900-K27, Peprotech, NJ, USA); TNF-α (cat. 900-K25, Peprotech, NJ, USA); CCL2/ MCP-1 (cat. 900-K31, Peprotech, NJ, USA); CXCL10/IP-10 (cat. 900-K39, Peprotech, NJ, USA); IL-6 (cat. DY206, R&D Systems, MN, USA); IL-10 (cat. DY217B, R&D Systems, MN, USA); CCL5/RANTES (cat. 900-K33, Peprotech, NJ, USA); CCL4/ MIP1-β (cat. 900-T36, Peprotech, NJ, USA); and CXCL-8/ IL-8/ (DY208, R&D Systems, MN, USA). Standard curves of known concentrations of recombinant human cytokines or chemokines were used to convert optical density (OD) into concentration units (pg/mL). The levels of cytokines/chemokines were analyzed using a SpectraMax Paradigm® instrument (Molecular Devices, San Jose, CA, USA).
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