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Siah-1 is a protein involved in the ubiquitin-proteasome pathway. It functions as an E3 ubiquitin ligase, targeting specific substrate proteins for degradation by the proteasome. Siah-1 plays a role in various cellular processes, including cell cycle regulation, apoptosis, and hypoxia response.

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2 protocols using siah 1

1

PCR Analysis of Notch-1 Pathway

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PCR analysis was performed using Solaris qPCR Gene Expression Assay for Human Gene Notch-1, Numb, Itch, Siah-1, and GAPDH Kits (Thermo Fisher Scientific). In particular, reverse transcription of total RNA was performed using Maxima First Strand complementary DNA (cDNA) Synthesis Kit for qPCR (Thermo Fisher Scientific). Data were analyzed by the CT method.
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2

Nutrient-Deprived Cell Death Assay

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Most cell lines were obtained from the American Type Culture Collection and cultured in either DMEM or RPMI 1640 medium with 10% FBS (Gibco, Newcastle, Australia) and 100 U/ml penicillin/streptomycin in a 5% CO2 incubator. HCC-M cells27 (link) were kindly provided by Dr E.C. Ren (National University of Singapore). Nutrient levels in cell medium were restricted as previously described17 (link). After brief rinsing with PBS twice, the cells were starved in Earle’s balanced salt solution (with 1 g/L glucose) or dual glucose-free and glutamine-free DMEM (Thermo-Fisher). Cell death and survival were measured by subG1, propidium iodide (PI, Sigma‒Aldrich) exclusion assay or lactate dehydrogenase (LDH) assays17 (link). Transient silencing was performed using Lipofectamine RNAiMAX transfection reagent with siRNAs specific for several known E3 ubiquitin ligases involved in mitophagy (PINK1, SIAH1, STUB1, and MUL1), all obtained from Thermo-Fisher.
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