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Bio scale mini bio gel p 6 desalting cartridge

Manufactured by Bio-Rad
Sourced in United States

The Bio-Scale™ Mini Bio-Gel® P-6 Desalting Cartridge is a pre-packed gel filtration column designed for the rapid and efficient desalting of small-volume samples. It is used to separate low-molecular-weight molecules, such as salts, from higher-molecular-weight compounds like proteins, peptides, or oligonucleotides.

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4 protocols using bio scale mini bio gel p 6 desalting cartridge

1

Recombinant Production of Human Na+/K+-ATPase

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The recombinant extracellular portion of human Na+/K+-ATPase α1 subunit (M1-M2, M3-M4, M5-M6, M7-M8 and M9-M10) was expressed as a His-fusion protein using Escherichia coli, and purified by affinity chromatography. Briefly, the extracellular portion of the α1 subunit gene incorporating BamH I and Hind III sites was synthesized by Life Tech. Ltd. (Shanghai, China). The BamH I-Hind III fragment of the gene was subcloned into a pET-32b expression vector (Novagen) and transformed into E. coli BL21 (DE3) cells (Novagen). The BL21 transformants were cultivated in LB medium with ampicillin to an A600 nm of 0.8 at 37°C. Expression was induced by adding isopropyl β-D-thiogalactopyranoside (IPTG) to a final concentration of 10 mM, and incubated overnight at 20°C. The fusion protein containing a His-tag was isolated from the bacterial lysates by Ni2+-chelation affinity chromatography using a Bio-Scale Mini Profinity IMAC Cartridge (Bio-Rad). Finally, the recombinant protein was desalted using a Bio-Scale Mini Bio-Gel P-6 Desalting Cartridge (Bio-Rad). The recombinant extracellular portions of the α2 and α3 subunits of human Na+/K+-ATPase were also expressed and purified using similar methods.
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2

HPLC Purification and Analysis of Proteins

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Reversed-phase HPLC purifications and analyses were performed on a Dionex Ultimate 3000 HPLC system. Specific columns, mobile phases, and gradient details are described in the appropriate sections below or in Supporting Information. For LC-ESI-MS analyses, the Dionex Ultimate 3000 HPLC was interfaced with an Advion CMS expressionL mass spectrometer. LC-ESI-MS data were analyzed using Advion Data Express software, and protein charge ladders were deconvoluted using a maximum-entropy algorithm provided by Analyst 1.4.2 software.
Desalting of protein solutions and immobilized metal affinity chromatography (IMAC) utilizing an imidazole gradient were carried out on an NGC Quest™ 10 Plus FPLC system (Bio-Rad) equipped with a 10 mL Bio-Scale™ Mini Bio-Gel® P-6 Desalting Cartridge or a 5 mL Bio-Scale™ Mini Nuvia™ IMAC Ni-Charged column. Additional details on mobile phase conditions, flow rates, and gradients are provided in the appropriate sections below.
UV-Vis measurements for estimating the concentration of protein and peptide solutions were obtained using either a Nanodrop ND-1000 spectrophotometer (ThermoFisher) or a Biotek® Epoch™ Microplate Spectrophotometer.
Imaging of SDS-PAGE gels stained with Coomassie Brilliant Blue R-250 was performed using a Gel Doc™ EZ imager (Bio-Rad).
Water used in all experimental procedures was purified using a Milli-Q Advantage A10 system (Millipore).
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3

Biochemical Characterization of Bacterial Enzymes

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Escherichia coli DH5α chemically competent cells were from Invitrogen (Carlsbad, CA). Genomic DNAs of Bacteroides fragilis NCTC 9343 (ATCC#25285), Bacteroides thetaiotaomicron VPI-5482 (ATCC#2914D-5), and Clostridium perfringens (ATCC#13124) were from American Type Culture Collection (ATCC, Manassas, VA, USA). Expression vector pET15b was from Novagen (EMD Biosciences Inc., Madison, WI, USA). Bio-Scale Mini Nuvia IMAC Cartridge and Bio-Scale™ Mini Bio-Gel® P-6 Desalting Cartridge were from Bio-Rad (Hercules, CA, USA). AccuPrep® PCR/Gel purification kit was from BIONEER Corporation. GeneJET plasmid spin kit, 1 kb DNA ladder, pre-stained protein ladder and FastDigest BamHI and XhoI restriction enzymes were from Fisher Scientific (Tustin, CA, USA). Phusion® HF DNA polymerase, Q5® site-directed mutagenesis kit, and T4 DNA ligase were from New England Biolabs Inc. (Beverly, MA, USA). 4-Methylumbelliferyl 2-acetamido-2-deoxy-α-D-glucopyranoside (GlcNAcαMU, 1) was from Toronto Research Chemicals (North York, Canada) and α-GlcNAc-terminated heparosan oligosaccharides 2–6 were synthesized previously using an efficient chemoenzymatic method (Na et al. 2020 (link)).
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4

Purification and Reconstitution of MsbA

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A fully-active MsbA mutant (Supplementary Fig. 11) was expressed and purified as previously described6 (link),45 (link). Briefly, MsbA expression in BL21 DE3-RILP E. coli cells (Agilent Technologies) was induced for 4 h at 30 °C with 1 mM IPTG at an OD600 of ~1. Crude membranes were prepared as described above for HR, and were solubilized for 1 h at RT with 2% DDM and 0.04% sodium cholate in a buffer containing 100 mM NaCl, 20 mM Tris/HCl, with 15% glycerol, 0.5 mM Tris (2-carboxyethyl) phosphine hydrochloride (TCEP) and 1 mM PMSF, pH 8. Solubilized MsbA was purified by metal affinity chromatography (Talon Superflow; Clontech) followed by size-exclusion chromatography using a Bio-Scale Mini Bio-Gel P-6 Desalting Cartridge (Bio-Rad, Hercules, CA) equilibrated with storage buffer: 100 mM NaCl, 20 mM Tris/HCl, 0.065% DDM, 0.04% sodium cholate, with 15% glycerol and 0.2 mM TCEP, pH 7.5. MsbA was stored at −80 °C until use. Protein concentration was determined by absorbance at 280 nm and purity was estimated at >95% from SDS-PAGE gels stained with Instant Blue (Expedeon). Reconstitution of purified MsbA into liposomes formed by E. coli polar lipids was performed by gel filtration and extrusion, as described for HR, but using a 1:10 protein:lipid ratio (w/w) in 100 mM NaCl, 20 mM Tris/HCl, with 0.1 mM TCEP, pH 7.4.
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