The largest database of trusted experimental protocols

Plasmid dna mini kit 1

Manufactured by Omega Bio-Tek
Sourced in United States

The Plasmid DNA Mini Kit I is a laboratory product designed for the rapid isolation and purification of plasmid DNA from bacterial cultures. The kit utilizes a silica-based membrane technology to efficiently capture and elute plasmid DNA, providing a convenient and reliable method for DNA extraction.

Automatically generated - may contain errors

4 protocols using plasmid dna mini kit 1

1

Electroporating pCMT-flp into E. coli SM10 λpir

Check if the same lab product or an alternative is used in the 5 most similar protocols
The pCMT-flp plasmid, which confers Tet resistance, was purified from a common cloning strain of E. coli, E.cloni 10G (Lucigen), using E.Z.N.A. Plasmid DNA Mini Kit I (Omega Bio-Tek) following manufacturer's protocol, and was eluted at a final concentration of 11 ng/μl. Electrocompetent E.coli SM10 λpir were prepared as described above. pCMT-flp plasmid DNA (11 ng) was introduced into electrocompetent E. coli SM10 λpir via electroporation following the protocol above, but with a single pulse of 1.6 kV, 25 μF, and 200 Ω, and incubated at 37°C with shaking at 200 rpm for 4 h. Cells were then plated onto 2xYT+10 μg/ml Tet. Presence of the pCMT-flp plasmid was verified by the ability of colonies to grow on Tet-selective media.
+ Open protocol
+ Expand
2

Establishing Leydig Cell Line with Nur77 Overexpression

Check if the same lab product or an alternative is used in the 5 most similar protocols
The cloning vector (pCDH-Puro), E.Z.N.A. Gel Extraction Kit, Plasmid DNA Mini Kit I and Endo-free Plasmid DNA Mini Kit II (Omega Bio-tek, Inc., USA), and Lipofectamine 2000 transfection reagent (Life Technologies Corp., USA) were used to establish the Leydig cell line with stable Nur77 overexpression. pCDH-Puro-Nur77 (the recombinant lentivirus vector) and pCDH-Puro (the blank vector as the negative control) were packaged into mature lentivirus by 293T cells and used to infect TM3 cells. The efficiency of Nur77 overexpression was determined using real-time PCR and western blot. Primer sequences of Nur77 were as follows: forward: 5′-GCGAGTCCGAGGATGGTG-3′ and reverse: 5′-CGGCCTCGCTCTGATTGTAG-3′. Nur77 antibody was from the Abcam Inc. (USA).
+ Open protocol
+ Expand
3

Quantifying EBNA1 and EBV Virion Production

Check if the same lab product or an alternative is used in the 5 most similar protocols
The pGEM-T vector containing EBNA1 was transformed into a competent cell (E. coli, DH5α). Bacteria carrying the plasmid were grown and extracted for the plasmids using E.Z.N.A.® Plasmid DNA Mini Kit I (E.Z.N.A.® Plasmid Mini Kit I, Omega Bio-tek®, Norcross, GA, USA) according to the manufacturer’s instructions. The concentration of plasmid was quantified by NanoDrop. The presence of EBNA1 was detected by PCR using EBNA1 primer pair (Table 2) and constructed the standard linear regression equation.
To determine whether andrographolide inhibits EBV virion production, EBV copy number was determined in the supernatant collected from cells that were either treated with CC15 or CC25 of andrographolide or NaB alone or a combination of CC15 or CC25 of andrographolide and NaB for 48 h. The supernatant was harvested by centrifugation and further extracted for DNA by adding cell lysis solution according to the manufacturer’s instructions (QIAGEN, Redwood City, CA, USA). The copy number of EBV genomes was estimated from the standard curve of EBV copy number by using CT values obtained from samples and the standard linear regression equation. The results were expressed by means of copies/50 ng of DNA derived from three independent experiments.
+ Open protocol
+ Expand
4

Cloning and Sequencing of ERBB2

Check if the same lab product or an alternative is used in the 5 most similar protocols
Oligonucleotides (ordered from Integrated DNA Technologies; listed in S4 Table ) were phosphorylated with T4 Polynucleotide Kinase (NEB M0201S) and annealed. The lentiviral vectors pLKO.1 or pLKO.1_TET (both marked with Hygromycin B) were used to clone the annealed oligos into with T4 DNA Ligase (NEB M0202M). ERBB2 was PCR amplified from pBABEpuro-ERBB2 (Addgene #40978) using T4 PNK treated forward oligo (oACH_001) and a reverse oligo (oTM-795). The resulting PCR product was digested with NotI and inserted into pcDNA3β (gift from Ralph Scully) using EcoRV and NotI cut sites. The plasmids were transformed into Stbl3 E. coli cells (ThermoFischer, C737303) and selected for on LB + Carbenicillin plates. 5mL cultures of single colonies from plates were grown and plasmids extracted with Omega Biotek E.Z.N.A. Plasmid DNA Mini Kit I (D6942-00S). Plasmid sequences were verified via Sanger sequencing or whole plasmid sequencing performed by Plasmidsaurus using Oxford Nanopore Technology with custom analysis and annotation.
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!