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U 3000 system

Manufactured by Thermo Fisher Scientific
Sourced in United States

The U-3000 system is a laboratory instrument designed for performing spectroscopic analysis. It is capable of measuring the absorbance or transmittance of light through a sample across a range of wavelengths. The system is equipped with a monochromator and a detector to enable the acquisition of spectral data.

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2 protocols using u 3000 system

1

Quantification of Surfactin Production via HPLC

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The surfactin production was quantified according to a published HPLC method (Zhu et al., 2014). Briefly, 1 ml samples were extracted from the shake flasks, and a cell‐free supernatant was obtained by centrifugation at 10,000 g for 10 min. An aliquot comprising 300 µl of the supernatant was withdrawn, diluted fivefold with methanol, and shaken for 1 min. Then, the precipitate of samples was removed through centrifugation for 2 hr at 10,000 g under 4°C.
Subsequently, the supernatant needed to be further filtered by a 0.22 μm nylon membrane remove impurities. The final sample was analyzed by HPLC on a U‐3000 system (Thermo Fisher Scientific, USA) equipped with a Synchronis C18 column (4.6 × 250 mm, 5 μm; Thermo Fisher Scientific) and a UV detector (Thermo Fisher Scientific). The analytes were detected at 214 nm, using 90% (v/v) methanol, 10% (v/v) water, and 0.05% trifluoroacetic acid as mobile phase with a flow rate of 0.8 ml/min. The authentic surfactin (98%) reference standard was purchased from Sigma‐Aldrich, USA. The proportions of surfactin isoforms were analyzed by comparing the peak areas observed by HPLC to the sum of areas of all surfactin peaks.
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2

Liquid Chromatography-Mass Spectrometry Protocol

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Liquid chromatographic separation and mass spectrometric detection were performed using a U3000 system coupled with a Q-Exactive-Obitrap MS (Thermo Scientific, Austin, TX, USA). Gradient elution was performed using Waters Acquity UHPLC BEH-C18 (1.7 μm, 2.1 × 100 mm) at a flow rate of 0.2 m/min under a column temperature of 30 °C. The injection volume was 5 μL. The mobile phase was composed of water containing 0.1% formic acid (A) and acetonitrile (B) with the following gradient elution procedure: 0–9 min, 96%–87% A; 9–30 min, 87%–75% A; 30–45 min, 75%–40% A; 45–55 min, 40%–0% A; 55–56 min, 0% A; 56–58 min, 0%–96% A; 58–63 min, 96% A. A mass spectrometer equipped with heated electrospray ionization (HESI) source was operated in both positive and negative ion modes with the following parameters: scanning range, 100‒1400 Da; ion spray temperature, 350 °C; ionization source voltage, 4 kV; capillary voltage, 35 V; and tube lens voltage, 110 V. Nitrogen was used as the auxiliary gas and sheath gas at pressures of 20 and 40 psi, respectively.
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