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Pvdf membrane

Manufactured by PerkinElmer
Sourced in United States, Germany, United Kingdom

PVDF membranes are polymer-based filtration membranes used in various laboratory applications. They are inert, chemically resistant, and have a high mechanical strength. PVDF membranes are commonly used for protein and nucleic acid transfer and detection in techniques such as Western blotting and Northern blotting.

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150 protocols using pvdf membrane

1

Protein Detection via SDS-PAGE and Western Blotting

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The protein samples of lysates or fractions were subjected to SDS-PAGE and transferred onto PVDF membranes (PerkinElmer). When needed, the blots had been cut prior to antibody hybridization. The indicated proteins were detected with specific primary and secondary antibodies and visualized by using an ECL detection kit (Thermo Scientific) as previously described65 (link). For quantification, the integral grayscale values of protein bands were recorded by using Scion Image or ImageJ software. All the original un-processed gel images are provided in the Supplementary Information file.
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2

Western Blot Analysis Protocol

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Extracted proteins were separated on polyacrylamide gels (DRC) and transferred to PVDF membranes (PerkinElmer). Nonspecific protein blocking was performed using 5% BSA. The membranes were incubated overnight at 4°C with primary antibodies and then incubated with secondary antibodies for 60 min at room temperature. The membranes were subsequently exposed to a chemiluminescent substrate (Nacalai Tesque) and analyzed using a LAS‐4000UV image analyzer (Fujifilm).
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3

Eukaryotic and Prokaryotic Expression of Atx3 and Related Proteins

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For eukaryotic expression, Atx3-I, Atx3-IC and their mutants were cloned into a FLAG-pcDNA3.0 vector, while P97, Ub and NEDD8 were cloned into HA pcDNA3.0. For prokaryotic expression, the C-terminal fragments of Atx3-II (22Q, 6Q) were cloned into pET-22b(+), while Atx346Q-IIC was cloned into pGBTNH, which encodes the fusion protein with a GB1 domain in the N terminus57 (link). P97-ND1 (residues 1–458) and P97N (1–213) were cloned into pET-22b(+), while Ub was cloned into pET-3a. The anti-FLAG antibody was from Sigma; anti-HA, anti-Ub and anti-actin were from Santa Cruz; and anti-GAPDH was from Zen BioScience. All the secondary antibodies were purchased from Jackson Immuno-Research. PVDF membranes were obtained from PerkinElmer Life Sciences, and ECL detection kit for proteins was from Thermoscientific.
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4

Western Blot Analysis of Cellular Antioxidant Proteins

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Anti-Gpx2 (sc-54604) and anti-GCLM (sc-22755) antibodies were purchased from Santa Cruz Biotechnology (Santa Cruz, CA, USA). Anti-β-action (AP0060) and anti-Nrf2 (BS1258) were purchased from Bioworld (Bioworld, USA). Anti-HO-1 (#5853S) were bought from Cell Signaling Technology (USA). Isolation of cell fractions and Western blotting were performed as detailed previously44 (link). Briefly, the extracts were separated by SDS-PAGE and then electrotransferred to PVDF membranes (Perkin Elmer, Northwalk, CT, USA). Membranes were blocked with 1% BSA for 1 h followed by incubation with a primary antibody at 4 °C overnight. Then they were washed and treated with a DyLight 800 labeled secondary antibody at 37 °C for 2 h. The membranes were screened through the odyssey infrared imaging System (LI-COR, Lincoln, Nebraska, USA).
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5

Cell Lysis and Protein Extraction for Western Blotting

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The transfected cells were lysed in 100 μL of a RIPA buffer (50 mM Tris-HCl, pH 7.5, 150 mM NaCl, 1 mM EDTA, 1% NP-40, cocktail protease inhibitor (Roche Applied Science)) on ice for 30 min and centrifuged at 15,000 g for 15 min. The supernatant was added with 100 μL of the loading buffer (2% SDS), while the pellet was sufficiently washed with the RIPA buffer for three times and then added with 50 μL of the loading buffer (4% SDS). Equal volume of supernatant and pellet fractions was subjected to SDS-PAGE with 12% acrylamide gel and transferred onto PVDF membranes (PerkinElmer). The mouse monoclonal antibodies against FLAG or Myc, goat anti-actin (Santa Cruz), goat anti-mouse IgG-HRP antibody and rabbit anti-goat IgG-HRP antibody (Jackson Immuno-Research) were used. The proteins were detected by an ECL detection kit (Thermo scientific). The band intensities were quantified by Scion Image software (Scion Corp).
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6

Western Blot Protein Analysis Protocol

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Cells were washed three times with ice-cold PBS and resuspended in 1% Triton X-100 lysis buffer on ice, followed by protein quantification by the Lowry method. Equal amounts of total protein were separated by SDS-PAGE and transferred onto PVDF membranes (PerkinElmer, USA). The membranes were incubated with appropriate primary antibodies at 4°C overnight after blocking for 2 h at room temperature with 5% skimmed milk in trimethyl benzene sulfonyl tetrazole buffer (TBST). After three washes with TBST, the membranes were incubated with secondary antibodies for 30 min at room temperature. Finally, the immunoreactive protein bands were visualized with enhanced chemiluminescence reagent (SuperSignal Western Pico Chemiluminescent Substrate, USA), followed by imaging on an Electrophoresis Gel Imaging Analysis System (DNR Bio-Imaging Systems, Israel).
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7

Macrophage Signaling Pathway Activation

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B10R macrophages were infected for 0.5 h, 1 h, and 3 h, with similar numbers of viral particles as in footpad injection, or stimulated with LPS (100 ng/ml) for 60 minutes as performed for induction of NF-κB nuclear translocation; uninfected wells served as negative controls. Experiments were performed in triplicate and proteins were extracted as previously described [15 (link)]. Briefly, following cell lysis and protein extraction of infected and uninfected cells, protein contents were dosed by Bradford Assay (Bio-Rad, Mississauga, ON, Canada). Proteins were resuspended in an SDS sample buffer containing bromophenol blue and beta-mercapto-ethanol, separated by SDS-PAGE using 10% acrylamide gels, and transferred to PVDF membranes (Perkin Elmer, Waltham, MA). Membranes were blocked for 1 hour in TBS- 0.05% Tween 20 containing 5% BSA before overnight incubation with the primary antibody (e.g. phospho-p44/42 (ERK 1/2), ERK 1/2, phospho-p38, p38, phospho-IRF3, IRF3, phospho-TBK1/NAK, TBK). Membranes were washed and incubated with the rabbit secondary anti-HRP-conjugated antibody (GE Healthcare, Baie d’Urfe, QC, Canada), and proteins were visualized by ECL Western Blot Detection System (GE Healthcare). USA).
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8

Protein Expression Analysis of Rat Striatal Region

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Under deep anesthesia (sodium pentobarbital i.p.; 50 mg/kg), rats were euthanized at 24 h. The striatal region of the brain was rapidly isolated and homogenized, and total proteins were extracted using protein extraction buffer (Mammalian Cell-PE LBTM, Geno Technology, USA) containing protease and phosphatase inhibitors (Complete Mini, Roche Diagnostics, Indianapolis, IN, USA). Lysed tissues were centrifuged at 12,500 rpm for 15 min (at 4 °C), and the supernatant was collected for storage at −80 °C or to perform a Western blot analysis. Proteins were separated by gel electrophoresis, and then electroblotted onto polyvinylidene difluoride (PVDF) membranes (PerkinElmer Life Sciences, USA). Membranes were blocked with 5% non-fat milk, and then incubated overnight at 4 °C with the indicated antibodies, including heme oxygenase (HO)-1, Bax, cleaved caspase-3, Beclin-1, LC3-I/II, and p62 (1:103 dilution) followed by an appropriate secondary antibody (1:2 × 104 dilution) for 1 h at room temperature. Signals were visualized using enhanced chemiluminescent (ECL) detection reagents (PerkinElmer Life Sciences). The membrane was then stripped and reprobed with an antibody specific for β-actin (1:104 dilution) to ensure the accuracy of each loading. Protein expression was quantified by a BioImaging System (Level Biotechnology).
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9

Quantitative Immunoblotting and Signaling Assay

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For immunoreactivity studies, tissue samples were diluted to 100 mg/mL in lysis buffer (#7018s, Cell Signaling Technology) and subsequently homogenized, sonicated, and spun at 3.5K RPM for 1 min. Lysate samples were then screened against an array of target-specific capture antibodies using PathScan Intracellular Signaling Array Kits (#7323, Cell Signaling Technology) in accordance with the manufacturer’s instructions and developed using HyBlot CL autoradiography film (#e3012, Denville Scientific Inc.). Processed films were digitized using an Epson Perfection V600 Photo scanner and the relative pixel intensities for each blot quantified using the image processing software ImageJ. Complementary western blot studies were performed by loading 20-40 µg of protein into 7.5-12% SDS PAGE gels, transferred to PVDF membranes (PerkinElmer), and resolved by electrophoresis. Membranes were blocked overnight at 4°C in trisbuffered saline 0.1% Tween-20 (TBST) containing 5% w/v nonfat dry milk powder and subsequently incubated with antibodies to p-ERK 1/2 Thr202/Tyr204 (Cell Signaling, 4370), pS6 (Cell Signaling, #4858) LC3B, (anti LC3B, Cell signaling 2775), or b-tubulin (Novus Biologicals, NB600-936); Membrane chemiluminescence was imaged on a Xenogen IVIS 200 system.
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10

Western Blot Protein Detection Protocol

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Samples were resolved on Mini-PROTEAN precast gels (Bio-Rad) and transferred to PVDF membranes (Perkin Elmer). Membranes were blocked in 5% nonfat milk in 1x PBST for 60 min at room temperature, then incubated with antibody diluted 1:2000 in 1x PBST containing 1% BSA for 60 min at room temperature or overnight at 4°C. After extensive washing in 1x PBST at room temperature, the membranes were incubated with goat anti-rabbit IgG horseradish peroxidase-conjugated antibody (Jackson ImmunoResearch) diluted 1:20,000 in 5% nonfat milk in 1x PBST for 45 min at room temperature. Membranes were washed extensively in 1x PBST, incubated for ~60 s with HyGLO chemiluminescent HRP antibody detection reagent (Denville), and imaged using an Amersham Imager 600 (GE Healthcare).
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