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2 protocols using rabbit anti dnp

1

In Situ DNA Damage and Carbonylation Detection

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For the in situ detection of DNA damage and nuclear carbonylation a double staining immunofluorescence assay was performed and visualized using confocal microscopy. Cells were treated, fixed, and permeabilized as described above. Cells were then incubated with 100 μl DNPH for 30 min at RT. The cells were then blocked for 1 hour with 10% normal goat serum, 0.2% Triton X-100 in PBS. Cells were incubated with primary antibodies, rabbit anti-DNP (Sigma-Aldrich), diluted 1:500 in 0.2% Triton X-100 in PBS and mouse anti-γH2AX antibody (Molecular Probes, Inc), simultaneously overnight at 4 °C. The following day, goat anti-rabbit Alexa Flour® 488 IgG and goat anti-mouse Alexa Fluor® 568 IgG H&L were applied for detection of the primary rabbit and mouse antibodies, respectively. Coverslips were mounted to slides with VECTASHIELD® mounting medium containing DAPI. DNP and γ-H2A.X double immuno-fluorescence staining were visualized with a Leica SP5 TCSII with Coherent Chameleon multiphoton (MP) Vision II (IR) laser confocal microscope and images taken under oil at 100x objective power. Image analysis was performed using ImageJ to measure the expression of DNP mean optical density and to calculate the number of γ-H2AX-positive cells divided by total number of cells multiplied by 100. The correlation of the data was determined by graphing the scatterplot and using linear regression analysis.
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2

Mitochondrial Dynamics Regulation Assay

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Chemicals were purchased from Sigma-Aldrich (Deisenhofen, Germany) except Mdivi-1 (Enzo Life Science, Lörrach, Germany) as well as doxycycline, blasticidin and zeocin (Invivogen, San Diego, CA, USA). Cell culture materials and media were obtained from Biochrom (Berlin, Germany). MitoTracker GreenFM (MTG) and MitoSOX™ Red superoxide indicator (MitoSOX) were purchased from Molecular Probes (Eugene, USA).
The following primary antibodies were used: rabbit anti-DNP (Sigma-Aldrich, Deisenhofen, Germany), rabbit anti-PINK1 (Cell Signaling, Boston, MA, USA), mouse anti-β-actin (Cell Signaling, Boston, USA), rabbit anti-COX IV (Cell Signaling, Boston, MA, USA), rabbit anti-Lon protease (Abcam, Cambridge, UK), mouse anti-GAPDH (Abcam, Cambridge, UK), rabbit anti-Ki-67 (Abcam, Cambridge, UK), mouse anti-CDKN2A/p16INK4α (Abcam, Cambridge, UK), rabbit anti-p21 Waf1/Cip1 (Cell Signaling, Boston, MA, USA), mouse anti-MT-CO1 (Abcam, Cambridge, UK), mouse anti-SDHA (Abcam, Cambridge, UK), mouse anti-VDAC (Abcam, Cambridge, UK) and rabbit anti-Fis1 (Cell Signaling, Boston, MA, USA). Secondary antibodies used for immunoblotting were purchased from LI-COR Biosciences (Lincoln, AL, USA). The FITC-labeled antibody for immunofluorescence was purchased from Invitrogen (Carlsbad, CA, USA).
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