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7 protocols using propidium iodide

1

Cell Cycle and Apoptosis Analysis by Flow Cytometry

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Following 48 hours of transfection, the cells were harvested through centrifugation at 1000 rpm for 4 minutes. The cells were then fixed overnight at 4°C in 70% ethanol. After 24 hours of fixation, the cells were washed three times with PBS. Subsequently, the cells were stained with a solution containing 500 μl of propidium iodide (Elabscience, Wuhan, China) and RNase A at a ratio of 9:1. The cells were subjected to flow cytometric analysis using a flow cytometer (BD Biosciences, San Jose, CA, United States) following a 45-minute incubation at room temperature. After 72 hours of transfection, the cells were harvested by centrifugation (1000 rpm, 4 minutes) and washed thrice with PBS. Subsequently, the cells were resuspended in 500μl of binding buffer and double stained with Annexin V and PI, in accordance with the instructions provided by the FITC Annexin V/PI Apoptosis kit (Elabscience, Wuhan, China). Flow cytometry was then performed on the samples using the flow cytometer (BD Biosciences) after a 15-minute incubation in the dark at room temperature.
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2

Characterization of Mesenchymal Stem Cells

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To confirm surface marker of MSCs, flow cytometry analysis was applied according to the manufacturer’s instructions. 1 × 106 cells at P3 in the logarithm growth period were collected. After washing with 1% pre-cooled FBS/PBS and centrifuging at 350×g for 5 min, these cells were incubated with anti-CD45-APC (Invitrogen, USA), anti-CD29-FITC (Invitrogen, USA), and anti-CD44-APC (Novus Biologicals, USA) in the dark at 4 °C for 30 min, respectively. Labeled cells were washed twice and examined using the FACScan flow cytometry system (BD, Franklin Lakes, USA). FlowJo software (TreeStar, Ashland, OR, USA) was used to analyze the data. PBS solution was used as negative control. For cell cycle analysis of DNA content, the cells were cultured for 48 h under normoxia or hypoxia condition before they were collected, washed with PBS, and resuspended with 0.3 ml PBS and 1.2 ml pre-cooled 100 % ethanol for 1 h at − 20 °C. The cells were then centrifuged (300×g, 5 min) and resuspended with 1 ml PBS for 15 min at room temperature. The cells were then centrifuged (300×g, 5 min) again. One hundred microliters RNase A (Elabscience Biotechnology Co., Ltd., China) was added to each sample which was incubated at 37 °C for 30 min. Before test, 400 μl propidium iodide (Elabscience Biotechnology Co., Ltd., China) was added to each tube at 4 °C for 30 min.
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3

Niclosamide Induces Cell Death

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Jurkat and CCRF-CEM cells were seeded at a density of 5×105 cells/well in a 24-well cell culture plate; Jurkat cells were treated with either the vehicle control (DMSO) or niclosamide (2 µM) while CCRF-CEM cells were treated with vehicle control (DMSO) or niclosamide (1 µM) at 37°C for 24 h. After incubation, the cells were washed twice with PBS, and then labeled with Annexin V-fluorescein isothiocyanate and propidium iodide (PI) according to the manufacturer's instructions (Elabscience). Fluorescence intensities were measured with flow cytometry. Each experiment was performed in duplicate, for at least three times independently.
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4

Apoptosis Quantification in Cardiac Cells

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We used the Annexin V-FITC apoptosis detection kit (Sigma-Aldrich, St. Louis, MO) to study apoptosis. Shortly, cardiac cells and H9C2 cells were collected and resuspended in 1 suspended in 1× binding buffer and stained with Annexin V-FITC (Elabscience, China) and propidium iodide (Elabscience, China) for 20 min at room temperature under dark conditions. Finally, the cells were acquired by FACSCanto II flow cytometry (BD Biosciences) and analyzed with FlowJo software.
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5

Cell Cycle Analysis of Triptolide Treatment

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Cells were first treated with triptolide (0, 20, 40, and 60 nM) for 24 hours, they were then harvested by trypsin, washed twice in phosphate buffered saline (PBS), and fixed in 70% ethanol at −20 °C for several hours. Then, the cells were suspended in PBS which contained 10 µg/mL of propidium iodide (PI) (Elabscience, Wuhan, Hubei, China) and 10 µg/mL of ribonuclease (RNase) A (Elabscience) at 37 °C for 30 minutes. The cell cycle was then analyzed by Beckman CytoFLEX flow cytometer (Beckman Coulter Life Sciences, Indianapolis, IN, USA) with CytExpert Software (version 2.3.1.22, Beckman Coulter).
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6

Apoptosis Evaluation of Cardiac Microvascular Endothelial Cells

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CMECs were digested and transferred to a tube, collected by centrifugation at 1000 g for 5 min, gently resuspended in PBS. The cell suspension was centrifuged at 1000 g for 5 min again, the supernatant was discarded, and CMECs were suspended in Annexin V FITC binding buffer. Annexin V FITC and propidium iodide (Elabscience, Wuhan, China) were supplemented and incubated with CMECs for 15 min in the dark. Apoptosis was analyzed using flow cytometry (BD FACSCanto, Franklin Lakes, NJ, USA) and FlowJo software.
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7

Apoptosis Assay in MCF7 Cells

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MCF7 cells (1 * 105 cells/ml) were seeded in a 6-well plate overnight as shown before. On the next day, the medium was replaced by fresh medium containing either DMSO (0.01%) or BFB (1.06 µM) and incubated for 48 h. The cells were trypsinized, harvested, and washed two times with 1×  PBS. The cells were stained with 5 µl Annexin-V-PE and 5 µl Propidium iodide (Elabscience Biotechnology Inc, E-CK-A211) in the binding buffer for 15 min. The stained cells were analyzed by using BD FACSCanto II™ Flow Cytometer.
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