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5 protocols using anti ly6g ly6c

1

Multi-marker Profiling of Immune Cells

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Isolated SVF cells or leukocytes were resuspended in 200 µl PBS containing 0.25% BSA, 0.2 mM EDTA, and 1% penicillin/streptomycin. Cells were preincubated for 7 min at 4 °C in Fc Block (CD16/32, BD Biosciences) and then stained for 15 min with fluorophore-conjugated antibodies at 4 °C. The following antibodies were used: anti-CD45 (clone: 30-F11, Biolegend), anti-F4/80 (clone: BM8, Biolegend), anti-CD11b (clone: M1/70, Biolegend), anti-CD11c (clone: N418, Biolegend), anti-CD206 (clone: C068C2, Biolegend), anti-CCR2 (clone: SA203G11, Biolegend), anti-Ly6G/Ly6C (clone: RB6-8C5, Biolegend), and anti-CD115 (clone: AFS98, Biolegend)15 (link). Flow cytometric analysis was performed using a FACSCantoII (BD Biosciences). Cell sorting was performed with a FACSAriaII (BD Biosciences). Data were analyzed using FlowJo software (v9.4.10, Tree Star).
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2

Murine Immune Cell Profiling

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A single cell suspension from thymi and spleens of 4–6 week-old mice was obtained using a Dounce homogenizer. Cells were first preincubated for 10 min on ice with Fc receptor-blocking anti-CD16/32 (clone 93) antibody in PBS-1% biotin-free BSA solution and then stained for 20 min with specific primary antibodies. Biotinylated primary antibodies were revealed with streptavidin conjugated fluorescent dyes (SAv-PE/Cy7, SAv-APC, SAv-APC/Cy7). Labeled cells were analyzed on BD FACSCantoII (BD Biosciences) or CytoFLEX (Beckman Coulter) flow cytometers and data analysis was performed using FlowJo software (FlowJo, LLC). Clones of monoclonal antibodies were: anti-CCR6 (29–2L17), anti-CD3ε (145–2C11), anti-CD4 (GK1.5), anti-CD5 (53–7.3), anti-CD8 (53–6.7), anti-CD11c (N418), CD24 (M1/69), anti-CD25 (PC61), anti-CD27 (LG.3A10), anti-CD28 (E18), anti-CD44 (IM7), anti-CD45.1 (A20), anti-CD45.2 (104), anti-CD71 (RI7217), anti-CD73 (TY/11.8), anti-CD117 (c-Kit, 2B8) anti-B220 (RA3–6B2), anti-CD11b (Mac1, M1/70), anti-γδT-cell (GL3), hamster IgG-PE/Cy7 (HTK888), anti-Ly6G/Ly6C (GR1, RB6–8C5), anti-Nk1.1 (PK136), anti-Tcrβ (H57–597), anti-Tcrβ(Vα2) (B20.1), Ter-119 (all from Biolegend). Splenocytes were analyzed as previously described (18 (link)).
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3

Isolating and Characterizing Kidney Macrophages

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The left kidney from each mouse was isolated and transferred to PBS on ice. Kidneys were weighed, cut into small pieces, and digested in a mix of enzymes. Briefly, collagenase type XI (125 U/mL), collagenase type IS (450 U/mL), and hyaluronidase IV-S (60 U/mL) were used for digestion at 37 °C for 20 minutes, with regular agitation. The digested tissue was then passed through a 70 μm sterile cell strainer (Falcon; BD Biosciences, San Jose, CA) to yield a single-cell suspension. Cells were washed and resuspended in fluorescence-activated cell sorting buffer, counted, stained, and collected using multicolor flow cytometry (BD LSR II flow cytometer with DIVA software, BD Biosciences). The macrophage population was defined as CD45+F4/80+CD11b+ cells and further characterized for M1 proinflammatory macrophage (CD11c+) as previously described.41 (link) Following antibodies were used in the panel: anti-CD45, anti-Ly-6G/Ly-6C, anti-CD11b, anti-CD11c (all from BioLegend), and anti-F4/80 (eBioscience). Dead cells were eliminated from analysis using Zombie Violet (BD Biosciences). For each experiment, fluorescence minus one control for each fluorophore was performed to establish gates. In selected experiments, accuracy of the fluorescence minus one gating strategy was confirmed using isotype controls. Data were analyzed by Flow Jo v.10 (Ashland, OR).
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4

Flow Cytometry Analysis of BALF Cells

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BALF cells were incubated (20 min) with anti‐CD45–PerCP, anti‐F4/80–fluorescein isothiocyanate, anti‐Ly6G/Ly6C–phycoerythrin, and anti‐Ter119–allophycocyanin (1 : 80; BioLegend, London, UK), fixed with 1% formaldehyde, and measured by flow cytometry (BD Accuri flow cytometer with BD accuric6, and flowjo 9 [Treestar, Ashland, OR, USA]). The following gating strategy was applied. CD45+ cells (leukocytes) were analyzed for F4/80 positivity (macrophages). Ly6C+ macrophages were termed inflammatory macrophages. CD45+ F4/80 cells were analyzed for Ly6G expression (neutrophils).
Total cell counts of BALF were calculated by multiplying the events by Final dilution for flowcytometerMeasured volume×ResupensionvolumeStained volume×Injected PBSRecollected PBS
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5

Histological Analysis of Lung and Kidney Tissues

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The excised lung and kidney tissues were fixed immediately with 4% PFA (#P804536; Macklin) for histological and immunostaining analyses. Sections (5 μm thick) were prepared from paraffin-embedded tissues and subjected to haematoxylin and eosin (H&E, Solarbio, #SL7050–500) staining. Immunostaining was performed using anti-Ly-6 G/Ly-6c (1:100, BioLegend, #108419), anti-F4/80 (1:100; BioLegend, #123119), anti-p-MLKL (1:100; Abcam, #ab196436), and anti-histone (1:100, ABclonal, #A2348) antibodies. The presence of death cells in lung and kidney sections was determined using terminal deoxynucleotide trans-ferase dUTP nick end-labelling (TUNEL) staining kit (KeyGEN BioTECH, #KGA7061) following the manufacturer’s manual.
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