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3 protocols using anti ifnγ apc xmg1.2

1

Quantitative analysis of mature DCs and T-cell cytokines

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Corneas and ipsilateral dLNs were harvested, and single-cell suspensions were prepared as described previously53 (link),59 (link). To avoid non-specific staining, cells were blocked with an anti-FcR blocking antibody (eBioscience, San Diego, CA, USA). The isolated cells were stained with the respective antibodies. Mature DCs were stained with anti-CD11c Alexa488 (N418, BioLegend, CA, USA), anti-CD45 PE (30-F11, eBioscience), and anti-I-A/I-E PeCy7 (M5/114.15.2, BioLegend). For intracellular IFNγ and IL-17 staining, the cells were stimulated with 50 ng/mL phorbol 12-myristate 13-acetate, and 500 ng/mL ionomycin (Sigma-Aldrich, St. Louis, MO, USA) for 6 h at 37 °C in a 5% CO2 incubator in the presence of GolgiStop (0.7 μL per 100 μL cell culture; BD Biosciences, San Jose, CA, USA) to inhibit cytokine secretion. The cells were then stained with anti-CD4 FITC, anti-IFNγ APC (XMG1.2), and anti-IL-17 PECy7 (TC11-18H10.1) (BioLegend) antibodies. All antibodies and their matched isotype controls, and the fixation and permeabilization buffers were purchased from eBioscience. The stained cells were examined using LSR Fortessa (BD Biosciences, Franklin Lakes, NJ, USA) and analyzed using FlowJo software X 10.5.3. (FlowJo LLC, Ashland, OR, USA; purchased from https://www.flowjo.com).
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2

Characterization of Cervical Lymph Node Immune Cells

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Cervical draining lymph nodes (dLNs) were harvested and single-cell suspensions were prepared. To avoid non-specific staining, cells were blocked with an anti-FcR blocking antibody (eBioscience, San Diego, CA, USA). Mature DCs were stained with anti-CD11c Alexa 488 (N418, BioLegend), anti-CD45 PE (30-F11, eBioscience) and anti-I-A/I-E PeCy7 (M5/114.15.2, BioLegend). Tregs were stained with anti-CD4 FITC (RM4-5), anti-CD25 PE (PC61) and anti-Foxp3 PECy7 (FJK-16s) (BioLegend, San Diego, CA, USA). For intracellular IFN-γ and IL-17 staining, cells were stimulated with 50 ng/ml phorbol 12-myristate 13-acetate (PMA) and 500 ng/ml inomycin (Sigma-Aldrich, St. Louis, MO, USA) for 12 hours at 37°C and 5% CO2 in the presence of GolgiStop (0.7μl per 100 μl cell culture media; BD Biosciences, San Jose, CA) to inhibit cytokine secretion. Cells were then stained with anti-CD4 FITC, anti-IFN-γ APC (XMG1.2) and anti-IL-17 PECy7 (TC11-18H10.1) (Biolegend). All antibodies and their matched isotype controls and fixation and permeabilization buffers were purchased from eBioscience. Stained cells were examined using the LSRII Flow Cytometer (BD Biosciences, Franklin Lakes, NJ, USA) and analyzed using FlowJo software X 10.0.7. (FlowJo LLC, Ashland, OR, USA).
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3

Multicolor Flow Cytometric Profiling of Immune Cells

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Single cell suspensions prepared from lungs, BLNs, spleens and bronchoalveolar lavage were stained with the indicated combinations of Alexa Fluor 780-conjugated anti-CD4 (RM4–5, eBioscience), anti-CD8-PEcy7 (53-6.7, BioLegend), biotinylated anti-ICOS (7E.17G9, BioLegend), biotinylated anti-CD43 (1B11, BioLegend) and APC/cy7streptavidin (BioLegend). For intracellular cytokine staining, cells were stimulated for 2 hours with phorbol 12-myristate 13-acetate (PMA) (0.1 µg/ml, Cat#p1585, Sigma) and ionomycin (1 µg/ml, Cat#I0634, Sigma) and with golgi stop (Brefeldin) (5 µl/ml, Cat#B7651, Sigma) for 2 hours, followed by permeabilization with NP-40 (igepal CA-630, Sigma) and staining with anti-IFNγ-APC (XMG1.2, BioLegend). Intracellular FoxP3 expression was determined using the FoxP3 staining buffer kit (FJK-16s, eBioscience) according to the manufacturer’s recommendations. For apoptosis assay, Annexin/7AAD staining was performed as described previously [35] (link). Flow cytometric analysis was performed using a FACSCanto or LSRFortessa (BD Biosciences) running with THE FACSDiva software (version 6.1.3) (BD Biosciences). Analysis was performed using FlowJo version 9.5.3 (Tree star, Inc.).
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