The largest database of trusted experimental protocols

3 protocols using anti cebpa 14aa

1

RNA and Chromatin Immunoprecipitation Analysis

Check if the same lab product or an alternative is used in the 5 most similar protocols
RNA was extracted in TRIzol reagent (Invitrogen) and treated with DNase I (Roche). Complementary DNA (cDNA) synthesis was obtained using SuperScript Vilo (Invitrogen). Expression of target genes was normalized for the β-actin gene expression. ChIP analysis was performed as previously described (43 (link)) using rabbit polyclonal antibody anti-p63 (H137, Santa Cruz Biotechnology), anti-histone H3K4me3 (Upstate 07–473), anti-H3K27Ac (Diagenode), anti-Cebpa (14AA, Santa Cruz Biotechnology), anti-Cebpb (C-19, Santa Cruz Biotechnology), anti- Pou3f1 (kindly provided by Dr. Michael Wegner, Universität Erlangen-Nürnberg, Germany) (55 (link)) or rabbit anti-mouse IgG (Santa Cruz Biotechnology). Real-time RT-PCR was performed using the SYBR Green PCR master mix (Applied Biosystems) in an ABI PRISM 7500 (Applied Biosystems). Oligonucleotide sequences are given in the Supplementary Data. For immunoblotting, cells were lysed in sample buffer and immunoblotted as previously described (43 (link)). The following primary antibodies were used: anti-p63 (4A4, Santa Cruz Biotechnology), anti-β-actin (Santa Cruz Biotechnology). For immunoblotting, secondary antibodies were sheep anti-mouse IgG conjugated to horseradish peroxidase (GE Healthcare) and visualized using Enhanced chemiluminescence (ECL) western blotting system (GE Healthcare).
+ Open protocol
+ Expand
2

Detecting C/EBPa Acetylation by CoIP

Check if the same lab product or an alternative is used in the 5 most similar protocols
CoIP was performed as described previously (M€ uller et al., 2010) . Anti-C/EBPa (14AA; Santa Cruz Biotechnology), anti-FLAG (M2, F3165; Sigma-Aldrich), anti-HA (MMS-101R; Convace), and anti-Tip60 (NBP2-20647; Novus Biologicals) were used for precipitation as indicated. To detect the acetylation of C/EBPa in Fao cells, endogenous level, or in transiently transfected HEK293T cells, the cells were treated with the deacetylase inhibitors 1 mM TSA (T8552; Sigma-Aldrich) and 5 mM NAM (47865U; Sigma-Aldrich) 8 hr before harvesting. The IP lysis buffer and IP wash buffer were supplemented with these inhibitors as well.
+ Open protocol
+ Expand
3

Characterization of C/EBPα Mutants in Metabolism

Check if the same lab product or an alternative is used in the 5 most similar protocols
The pcDNA3-based full-length (p42) rat C/EBPa and rat C/EBPa-FLAG have been described earlier (M€ uller et al., 2010) ; cloning details are available upon request. See Supplemental Experimental Procedures for other plasmids used.
Cell Culture, Transfection, and Immunofluorescence All cells were cultured in DMEM plus 10% fetal calf serum (FCS) (Invitrogen) and penicillin/streptomycin at 5% CO 2 and 37 C. HEK293T cells were seeded at 2.5 3 10 6 cell in 10 cm dishes and transfected the next day with 5 mg expression vectors using calcium phosphate. The immunofluorescence staining protocol was described previously (M€ uller et al., 2010) . The primary antibodies used were anti-C/EBPa (14AA; Santa Cruz Biotechnology), anti-FLAG (M2, F3165; Sigma-Aldrich), and anti-HA (MMS-101R; Convace). Secondary antibodies used were Alexa Fluor 488 or 568 conjugated (Invitrogen). p300 inhibitor C646 (CAS 328968-36-1; Sigma-Aldrich) was used at final concentration of 10 mM.
(D and F) Basal and maximal ECAR in cumate-induced Hepa1-6 cells expressing WT, K159/298Q-, or K159/298R-C/EBPa-FLAG proteins and cultured in medium with 25 mM (D) or 2.5 mM (F) glucose. For all experiments (n = 5), statistical differences were analyzed using Student's t tests. Error bars represent ± SD. *p < 0.05, **p < 0.01, ***p < 0.001; NS, not significant.
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!