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Uhplc q exactive hf x

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The UHPLC-Q Exactive HF-X is a high-performance liquid chromatography (UHPLC) system coupled with a quadrupole-Orbitrap hybrid mass spectrometer. It provides high-resolution, accurate-mass (HRAM) detection for a wide range of analytical applications.

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5 protocols using uhplc q exactive hf x

1

Metabolite Profiling by LC-MS

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Metabolites were detected using an LC-MS analysis platform (UHPLC -Q Exactive HF-X, Thermo Fisher Scientific, Waltham, MA, USA) at Majorbio (Shanghai, China). Chromatographic conditions: The chromatographic column was ACQUITY UPLC HSS T3 (100 mm × 2.1 mm I.D., 1.8 µm; Waters, Milford, MA, USA); mobile phase A consisted of 95% water +5% acetonitrile (containing 0.1% formic acid), and mobile phase B consisted of 47.5% acetonitrile +47.5% isopropanol +5% water (containing 0.1% formic acid). The injection volume was 2 μL, and the column temperature was 40 °C. The samples were ionized by electrospray ionization, and the positive and negative ion scanning modes were used to collect the mass spectrum signals.
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2

Rumen and Serum Metabolomics by LC-MS

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The rumen and serum samples were analyzed using the LC–MS platform (Thermo, UHPLC -Q Exactive HF-X). Sequence data associated with this project have been deposited in MetaboLights (ID: MTBLS7520).
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3

LC/MS Lipid Profiling Protocol

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LC/MS analysis of lipid extracts was performed on an ultra-high performance liquid chromatography-tandem Fourier transform mass spectrometry (UHPLC-Q Exactive HF-X; Thermo, Waltham, MA, USA) system equipped with an Accucor C30 column (100 mm × 2.1 mm, 2.6 μm; Thermo, Bremen, Germany). The injection volume, column temperature, and flow rate were set as 2 μL, 40 °C, and 0.4 mL/min, respectively. The mobile phase consisted of solvent I [acetonitrile/water, 1:1 (v/v); containing 0.1% formic acid and 10 mmol/L ammonium acetate] and solvent II [acetonitrile/isopropyl alcohol/water, 10:88:2 (v/v); containing 0.02% formic acid and 2 mmol/L ammonium acetate]. Elution separation was performed according to the following gradient: 0–4 min, I/II (65:35, v/v); 4–12 min, I/II (40:60, v/v); 12–15 min, I/II (15:85, v/v); 15–18 min, I/II (0:100, v/v); and 18–20 min, I/II (65:35, v/v).
Afterward, the samples were ionized by electrospray, and the MS signals were collected by positive and negative ion scanning modes. Parameters are as follows: scan type, 200–2000 m/z; sheath gas flow rate, 60 psi; aux gas flow rate, 20 psi; aux gas heater temperature, 370 °C; ion spray voltage floating in the positive mode, 3 kV; ion spray voltage floating in the negative mode, −3 kV; and normalized collision energy, 20–40–60 V.
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4

Metabolite Extraction from Leaf Samples

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Fifty milligrams of solid leaf material were accurately weighed, and the metabolites were extracted using 400 µL of methanol/water (4/1, v/v) solution. The mixture was then incubated at −20 °C and subjected to a high-throughput tissue crusher (Wonbio-96c, Shanghai Wanbo Biotechnology Co., Ltd., Shanghai, China) at 50 Hz for 6 min, followed by vortexing for 30 s and ultrasonication at 40 kHz for 30 min at 5 °C. The samples were then incubated at −20 °C for 30 min to precipitate the proteins. After centrifugation at 13,000× g at 4 ℃ for 15 min, the supernatant was carefully transferred to sample vials for LC-MS/MS (UHPLC -Q Exactive HF-X, Thermo Fisher Technology (Shanghai, China) Co., Ltd.).
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5

Untargeted Metabolic Profiling by UHPLC-MS

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The sample pre-treatment was referenced the method in Wang et al. [13 ]. Chromatographic separation of the metabolites was performed on UHPLC-Q Exactive HF-X (Thermo, USA) equipped with an ACQUITY UPLC HSS T3 column (100 mm × 2.1 mm i.d., 1.8 μm; Waters, Milford, USA). The optimal conditions were set as listed (Tables S1–3).
After LC/MS analysis, the raw data were imported into the Progenesis QI (Waters Corporation, Milford, USA). The extracted data included the mass-to-charge ratio (m/z) values, peak intensity, and retention time (RT). These metabolites were identified by using the mass spectra and characteristic peaks searching from biochemical databases such as Metlin (https://metlin.scripps.edu/).
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