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7 protocols using myelin removal kit

1

Isolation of Microglia from Mouse Striatum

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Four 1-mm-thick sections of the left striatum were dissected from one Cx3cr1GFP/+ mouse with a mouse brain slicer matrix (Zivic Instruments, Pittsburgh, PA), and microglia from three mice were isolated and pooled. The striatum was dissociated by magnetic-activated cell sorting with the GentleMACS Dissociator and Neural Tissue Dissociation Kit (Miltenyi Biotec) [27 (link), 28 (link)]. Myelin was removed by incubating single-cell suspensions with anti-myelin immunoglobulin-conjugated magnetic microbeads (Myelin Removal Kit; Miltenyi Biotec). After the cells were washed, cell supernatants were analyzed by CytoFLEX (Beckman Coulter, Indianapolis, IN) with CytExpert software 2.0 (Beckman Coulter). Propidium iodide (Sigma, St. Louis, MO) staining was used to exclude dead cells. The GFP fluorochromes were excited with the 488-nm laser and GFP-positive cells were gated.
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2

Isolation of Primary Astrocytes

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Astrocytes were acutely isolated as previously described (Holt and Olsen, 2016 (link); Kahanovitch et al., 2018 (link); Stoica et al., 2017 (link)). Following dissociation, microglia and myelin were first removed from the cell suspension. Cells were incubated for 15 min at 4°C with 15 µL of Miltenyi Biotec’s Myelin Removal Kit and Cd11b+ MicroBeads. The suspension was then applied to a prepped LS column, washed three times, and the flow-through collected. This flow through was subsequently used to isolate astrocytes utilizing Miltenyi Biotec’s ACSA-2+ MicroBead kit. The cell suspension (in 150 µL 0.5% fatty-acid free BSA in PBS) was incubated at 4°C for 15 min with 15–20 µL FcR blocker, followed by a 15 min incubation with 15–20 µL ACSA-2 microbeads. Cells were applied to a prepped LS column. Astrocytes were eluted from the LS column after three washes, with 5 mL buffer and the supplied plunger.
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Myelin Removal for Astrocyte Isolation

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Prior to the isolation of astrocytes, we performed a debris-removal step using protocols from Miltenyi Biotec’s Myelin Removal Kit (catalogue number 130096733). Following dissociation, the cells were incubated for 15 min at 4 °C with Myelin Removal Beads II, following the ratio of 500 mg of brain tissue in 1,800 μL of buffer + 200 μL of myelin removal beads)45 (link). The cells were washed with 0.5% BSA in PBS and centrifuged at 300×g for 5 min to remove any unbound spheres from the pellet. After that, the pellet was resuspended in 500 μL of buffer, the suspension was added to a LS column prepared in the MACSMidi magnetic cell separator, and the flow-through was collected. The column was further washed three times with 3 mL of buffer to ensure the removal of the unlabelled cells. The cells retained on the column were eluted in 5 mL of buffer. The flow-through was used in subsequent steps for astrocyte isolation.
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4

Astrocyte Isolation via ACSA-2 MicroBeads

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Astrocyte isolation was performed according to Holt and Olsen (2016) (link). Briefly, mice were anesthetized with CO2 and rapidly decapitated, and their cortices were microdissected in ice-cold cutting solution (120 mm NaCl, 3 mm KCl, 2 mm MgCl2, 0.2 mm CaCl2, 26.2 mm NaHCO3, 11.1 mm glucose, and 5 mm Hepes), supplemented with AP5 (3 mm) and CNQX (3 mm) and bubbled with 95% oxygen. The tissue was minced and enzymatically dissociated with a Papain Dissociation kit (Worthington) following manufacturer’s instructions. After dissociation, myelin debris and microglia were removed using a Myelin Removal Kit (Miltenyi Biotec) and Cd11b+ Microbeads (Miltenyi Biotec), respectively. Astrocytes were then acutely isolated using anti–ACSA-2+ (astrocyte cell surface antigen 2) MicroBead kit (Miltenyi Biotec). The ASCA-2+ epitope is from the astrocyte-specific β2 subunit of the sodium potassium exchanger (Batiuk et al., 2017 (link)). The anti–ACSA-2+ antibody is highly specific for astrocytes (Holt and Olsen, 2016 (link)), is robustly expressed in astrocytes (Kantzer et al., 2017 (link)), and is used as a first choice for isolating astrocytes (Batiuk et al., 2017 (link)). Manufacturer instructions were generally followed, except incubation times were extended to 25 min and total volume of microbeads was increased to 20–40 μl.
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5

Cerebellum Astrocyte Isolation via MACS

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The cerebellum was macrodissected for astrocyte isolation using magnetic-activated cell sorting (MACS) [16 (link)]. Briefly, the cerebellum was mechanically dissociated using a scalpel, followed by enzymatic dissociation using the Neural Tissue Dissociation kit (P) (Miltenyi Biotec, Cologne, Germany), according to the manufacturer’s instructions. Myelin and cell debris were removed using the Myelin removal kit (Miltenyi Biotec), followed by microglia removal using Cd11b microbeads (Miltenyi Biotec). Finally, astrocytes were isolated using anti-astrocyte cell surface antigen (ACSA)-2 beads (Miltenyi Biotec). All the separation steps were performed using the AutoMACS Pro Separator equipment (Miltenyi Biotec).
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6

Microglial Immunophenotyping from Brain

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Meninges discarded tissue samples were transported immediately to the laboratory for processing. The tissue was dissociated (Brain Dissociation kit, Miltenyi). The dissociated cells underwent myelin removal (Myelin removal kit, Miltenyi) and CD11b+ cells were further purified (CD11b microglia Microbeads, Miltenyi). All kits were used according to the manufacturers instructions. The cells were then surface stained with fluorescently conjugated antibodies for microglial markers: CD11b-APC, CD45-Bv605 and P2RY12-Bv421, CD26-FITC, and CD36-PE (Biolegend). The cells were incubated with antibodies for 30 min on ice, washed, resuspended in 500 μL staining buffer, and acquired on a FACS Fortessa (BD Biosciences). Results were analyzed using FlowJo software.
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7

Isolation and Purification of Myelinated and CD11b+ Cells

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Isolated spinal cords and brain stems from end stage SOD1 (G86R) mice were transferred into a 2 ml sterile tube with 1 ml of Hank's balanced salt solution (HBSS) (Invitrogen), then triturated to single-cell suspension using Miltenyi's Neural Tissue Dissociation Kit (P) (Miltenyi Biotec). After a final wash in HBSS containing CaCl 2 and MgCl 2 , the cell suspension was incubated with anti-myelin magnetic microbeads using Myelin removal kit (Miltenyi Biotec). The cell suspension was passed onto LS columns (Miltenyi Biotec) exposed to a strong magnetic field. The flow through (demyelinated cells) was incubated with anti-CD11b magnetic microbeads using CD11b kit (Miltenyi Biotec). The cell suspension was passed onto LS columns (Miltenyi Biotec) exposed to a strong magnetic field. The flow through (non-CD11b cells) was subsequently used as a negative control and the suspension obtained once the magnetic field was switched off (CD11b cells) used as a positive fraction. Both fractions were used for gene expression analysis.
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