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12 protocols using platelet derived growth factor

1

Glial Differentiation of Mesenchymal Stem Cells

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We used preinduction and induction according to glial differentiation protocol for mesenchymal stem cells (Sanchez-Ramos et al., 2000 (link)). hDPSc at fourth passage were preinduced in the presence of DMEM-F12 medium, containing FBS 5% and retinoic acid (Sigma Aldrich), 1M for 4 days. In the induction stage, the cells were incubated in DMEM/F12 medium in the presence 5 ng/mL platelet-derived growth factor (Sigma Aldrich) and 10 ng/mL basic fibroblast growth factor (Sigma Aldrich) for 8 days.
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2

Protein Kinase D Signaling Analysis

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Antibodies were from the following sources: PKD1-Ser(P)744/Ser(P)748 (Cat. #2054), PKD1-Ser(P)916 (Cat. #2051), PKD1 (Cat. #2052), and PKD3 (Cat. #5655) were from Cell Signaling Technologies. PKD2 (Cat. ab57114, a monoclonal antibody raised against residues 1–110 at the N terminus of human PKD2) was from Abcam. C3 exotoxin was from Cytoskeleton, Inc. GF109203X and Gö6976 were from Enzo Life Sciences. S1P was from Avanti Polar Lipids. Thrombin, Endothelin-1, norepinephrine, platelet-derived growth factor (PDGF) and PMA were from Sigma. All other chemicals were regent grade.
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3

Oligodendrocyte Differentiation from NSCs

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The in vitro differentiation of the NSCs into oligodendrocytes was induced by seeding a single cell suspension at a density of 5×103 cells/L on 24-well plates coated with poly-D-lysine
(Sigma-Aldrich, MO, USA). First, the cells were cultured in a complete medium, including the bFGF (10 ng/mL) and the platelet-derived growth factor (30 ng/mL, Sigma-Aldrich, MO, USA) for 24 hours,
which was then replaced with a growth factor-free medium and treated in 4 different conditions for 1 week.5 (link) There were 4 groups in the present study.
A negative control group, which received only the bFGF; a positive control group, which received only 30 ng/mL of T3 (Sigma-Aldrich, MO, USA); a group treated with 20 µM of 9-cis-RA; and a group treated
with 200 nM of 1,25(OH)2D3.
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4

Pharmacological Modulation of Neuronal Signaling

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GABA, Bicuculline methochloride, Tetrodotoxin citrate, NBQX and D-APV were purchased from Abcam Biochemicals (Cambridge, UK); Furosemide (100 mM in dimethyl sulfoxide (DMSO)), Bumetanide (50 mM in EtOH) and PP2 (10 mM in DMSO) were purchased from Tocris Biosciences (Bristol, UK); FluoZin-3AM (Invitrogen, 5 mM DMSO); K252a (Calbiochem, Merck S.p.a., Milano, Italy); DIOA (Santa Cruz Biotechnology, Inc., Heidelberg, Germany; 200 mM in EtOH); BDNF (PeproTech EC Ltd., London, UK); TPEN (10 mM in EtOH), Gramicidin (50 mg/ml in DMSO), Sulfasalazine (500 mM in DMSO), platelet-derived growth factor and all chemicals used were purchased from Sigma-Aldrich, Milan, Italy. Where not indicated, all drugs were dissolved in water. Antibodies were purchased and used as follows: rabbit anti-Phospho TrkB (phospho Y515, 1 : 500, Abcam, Cambridge, UK), rabbit anti-Phospho Src (phospho Y416, 1 : 2000, Abcam), mouse anti- Neuronal Class III β-tubulin (TuJ1, 1 : 2000, n.cat MMS-435P, Covance, San Diego, CA, USA), rabbit anti-actin (1 : 5000, Sigma-Aldrich); rabbit anti-KCC2 (1 : 1000; Millipore, Temecula, CA, USA).
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5

Glial Induction of hDPSc

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Glial induction was done according to a two step induction protocol. Briefl y, hDPSc at 4th passage was cultured in the presence of DMEM-F12 medium containing 1M Retinoic acid (Sigma Aldrich) for 4 days. The cells were treated with 5 ng/ml plateletderived growth factor (Sigma Aldrich), 10 ng/ml basic fi broblast growth factor (Sigma Aldrich) for 8-10 days.
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6

Optimizing Endothelial Differentiation from Bone Marrow

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Endothelial differentiation culture medium (EDCM) was optimized using unsorted BM. EDCM contained Iscove's Modified Dulbecco's Medium (Gibco, Carlsbad, CA, https://www.thermofisher.com/us/en/home/brands/gibco.html), and supplementary factors: 20% fetal calf serum (FCS) (Thermo Scientific, Waltham, MA, https://www.thermofisher.com/se/en/home.html), 2 mM l‐glutamine, 1% insulin‐transferrin‐selenite, 1% nonessential aminoacids, 0.5% penicillin‐streptomycin, 0.1% β‐mercaptoethanol (Gibco), 15 IU/ml heparin (Fisons Pharmaceuticals, Ipswich, U.K.), 50 ng/ml vascular endothelial growth factor (Sigma Aldrich, MO, http://www.sigmaaldrich.com), 75 µM ascorbic acid (Sigma Aldrich), 1 µM hydrocortisone (Sigma Aldrich), and 5 ng/ml basic fibroblast growth factor (Sigma Aldrich). For plate‐adherent cell isolation, dulbecco modified eagle medium (DMEM) with supplementary factors: 20% FCS, 2 mM l‐glutamine, 1% insulin‐transferrin‐selenite, 1% non‐essential amino acids and 0.5% penicillin‐streptomycin was used (all reagents from Gibco). Long‐term culture growth medium contained DMEM, 10% FCS, 1,000 U/ml leukemia inhibitory factor, 10 ng/ml epidermal growth factor, and 10 ng/ml platelet‐derived growth factor (Sigma Aldrich).
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7

Antibody Validation for EGFR Signaling

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The primary antibodies MAPK (Erk) (#9102, 1:1000), Akt (1:1000, #9272), Phospho-EGF Receptor (Tyr1068) (1:1000, #2234), p(Thr308)-Akt (1:1000, #9275), Phospho-Akt (Ser473) (1:1000, #9271), Phospho-MAPK (pERK) (1:1000, #9101), β-Actin (1:10000, #4967) were purchased from Cell Signaling (Leiden, The Netherlands) and anti-EGFR (1:1000, sc-03-G) was purchased from Santa Cruz Biotechnology(Texas, USA). Cetuximab (ERBITUX) was ordered from Merck (Dietikon, Switzerland). Gefitinib (Iressa) was bought from Sigma (Zwijndrecht, The Netherlands); sunitinib was purchased from LC Laboratories (Woburn, USA). Entinostat and SAHA were purchased from Selleckchem (Munich, Germany). Staurosporine and cisplatin were purchased from Sigma-Aldrich (Zwijndrecht, Nederland). Doxorubicin was purchased from Teva Pharmaceuticals. All drugs were aliquoted in DMSO and stored at -20°C. The human epidermal growth factor (hEGF) and platelet-derived growth factor (PDGF) were purchased from Sigma-Aldrich (Zwijndrecht, Nederland).
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8

PDGF Signaling Modulation via AP-1 and C/EBPβ

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Platelet derived growth factor (PDGF) was purchased from Sigma (St. Louis, MO), and OPN (sc-21742) and β-actin (sc-47778) antibodies were purchased from Santa Cruz Biotechnology Inc. (Beverly, MA). Horseradish peroxidase (HRP)-conjugated IgG antibody (Santa Cruz Biotechnology Inc.) was used as the secondary antibody. PCR primers were from Bioneer (Seoul). AP-1 (10024-2-AP) antibody was purchased from Proteintech (Proteintech Group, Chicago, USA), and C/EBPβ (ab15049) antibody from Abcam (Cambrige, MA). Restriction enzymes were supplied by Promega (Madison, WI).
AP-1 and C/EBPβ siRNA oligonucleotides were synthesized by Bioneer (Daejeon, Korea). siRNA molecules were transfected into cells using Lipofectamine 2000 siRNA transfection reagent (Invitrogen, Carlsbad, CA), according to the manufacturer's instructions. siRNA sequences against AP-1 and C/EBPβ were as follows: AP-1, ACUGUAGAUUGCUUCUGUA (sence) and UACAGAAGCAAUCUACAGU (antisense); C/EBPβ, GACAAGCUGAGCGACGAGU (sence) and ACUCGUCGCUCAGCUUGUC (antisense).
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9

Neurotrophic Differentiation of Mesenchymal Progenitor Cells

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MPCs were seeded at 1 × 103 cells/cm2 on tissue culture plastic or NFs and differentiated neurotrophically using a modified 10-day protocol [27 (link), 29 (link), 42 (link)]. Twenty-four hours after seeding, MPCs were incubated with GM supplemented with 10 mM β-mercaptoethanol (Sigma) for 24 h, followed by 48 h in GM supplemented with 10 mM β-mercaptoethanol + 35 ng/ml retinoic acid (Sigma). For the 6 following days, MPCs were incubated with neurotrophic medium (DMEM/Ham’s F12 + PSF (Invitrogen) supplemented with 2% FBS, 2% B-27 (Invitrogen), 6 mg/ml retinoic acid, 1 ng/ml FGF-2 (Sigma), 10 ng/ml platelet-derived growth factor (PDGF; Sigma), 150 ng/ml heregulin (an isoform of neuregulin-1; Sigma), and 10 μM forskolin (Sigma)).
Following neurotrophic differentiation, MPCs (designated nMPCs) were washed with PBS and either lysed with TRiZol, or incubated with basal medium (see above) for 48 h to produce conditioned medium (nMPC-CM). For DRG coculture experiments, tissue culture plastic-cultured nMPCs were trypsinized and transferred to DRG-containing fibers at a concentration of 1 × 103 cells/cm2.
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10

Ephrin-Induced EphA4 Biosensing Protocol

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1 mM pervanadate solution was prepared as previously described.33 (link) 10 mL of 100 mM Na3VO4 and 50 mL 0.3% H2O2 in 20 mM HEPES (pH 7.3) were mixed in 940 mL H2O. After 5 min a small scoop of 100 μg catalase (CalBiochem, 260 U/mL) was added to release excess H2O2.
Recombinant human ephrinA3 Fc chimera (R&D systems, Minneapolis, MN) was preclustered using anti-human IgG (Jackson Immuno Research, West Grove, PA) for 1 h at room temperature in a 5:1 molar ratio. Recombinant mouse ephrinA1 Fc chimera, ephrin B2 Fc chimera (R&D systems, Minneapolis, MN) was used as a stimulant for the EphA4 biosensors without preclustering (since similar activation was observed with and without preclustering). Platelet-derived growth factor (PDGF) was purchased from Sigma. PP1 src inhibitor was purchased from Sigma.
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