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15 protocols using pro measure

1

Immunoblotting Analysis of Platelet Signaling Pathways

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Washed platelets were pre-incubated with experimental samples and stimulated for aggregation reaction as previously described. After terminating the reaction, lysates were then prepared by solubilizing and centrifuging platelets in a sample buffer (0.125 M Tris-HCl, pH 6.8; 2% SDS, 2% β-mercaptoethanol, 20% glycerol, 0.02% bromophenol blue, 1 μg/mL phenylmethylsulfonyl fluoride, 2 μg/mL aprotinin, 1 μg/mL leupeptin, and 1 μg/mL pepstatin A). Protein concentration was determined by BCA assay (PRO-MEASURE; iNtRON Biotechnology, Seoul, Republic of Korea). Total cell proteins (30 μg) obtained from platelet lysates were resolved by 10% SDS-PAGE and transferred to nitrocellulose membranes in transfer buffer (25 mM Tris at pH 8.5, 0.2 M glycine, and 20% methanol). The membranes were blocked in TBS-T containing 5% nonfat dry milk and incubated with primary antibody diluted in a blocking solution. The membranes were then probed with antibodies of phospho-ERK2, ERK2, phospho-p38, p38, phosphor-PLCγ2, PLCγ2, phospho-PI3 K (p85), PI3 K and β-actin. The blots were then incubated with the horseradish peroxidase-conjugated secondary antibody. Antibody binding was visualized by enhanced chemiluminescence (iNtRON Biotechnology, Seoul, Republic of Korea).
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2

Platelets Activation by R. acetosa

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Platelets were pre-incubated either with vehicle or different concentration of R. acetosa extract in the presence of 1 mM CaCl2 at 37 °C for 2 min prior to stimulation with collagen (2.5 μg/mL) for 5 min under continuous stirring condition. Reacting was terminated by adding lysis buffer [0.125 M Tris–HCl, pH 6.8; 2% SDS, 2% β-mercaptoethanol, 20% glycerol, 0.02% bromophenol blue, 1 μg/mL phenyl methyl sulfonyl fluoride (PMSF), 2 μg/mL aprotinin, 1 μg/mL leupeptin, and 1 μg/mL pepstatin A]. Proteins were quantified by BCA assay (PRO-MEASURE; iNtRON Biotechnology, Seoul, Korea) and total cell proteins (35 μg) from the lysates were segregated on 10% SDS-PAGE followed by transferring to polyvinylidene difluoride (PVDF) membranes. The membranes were blocked in 5% skim milk and then probed with primary and secondary antibodies accordingly in 5% BSA solution. Finally, antibody binding was pictured by enhanced chemiluminescence (iNtRON Biotechnology, Seoul, Korea).
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3

Platelet Activation and Signaling Assay

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Platelet suspensions (3 × 108/mL) were pre-incubated with MAE or vehicle (0.1% (v/v) DMSO) at 37°C for 2 min. Platelet activation was induced by the addition of 2.5 μg/mL collagen and the reaction was allowed to proceed for 5 min. After terminating the reaction, lysates were then prepared by solubilizing and centrifuging the platelets in sample buffer (0.125 M Tris-HCl, pH 6.8; 2% SDS, 2% β-mercaptoethanol, 20% glycerol, 0.02% bromophenol blue, 1 μg/mL phenylmethylsulfonyl fluoride (PMSF), 2 μg/mL aprotinin, 1 μg/mL leupeptin, and 1 μg/mL pepstatin A). Protein concentration was determined using a BCA assay (PRO-MEASURE; iNtRON Biotechnology, Seoul, Republic of Korea). Total cell proteins (30 μg) from the platelet lysate were resolved by 10% SDS-PAGE and transferred to nitrocellulose membranes in transfer buffer (25 mM Tris, pH 8.5; 0.2 M glycine, and 20% methanol). The membranes were blocked in TBS-T containing 5% nonfat dry milk and incubated with primary antibody diluted in a blocking solution. The blots were then incubated with horseradish peroxidase-conjugated secondary antibody. Antibody binding was visualized using enhanced chemiluminescence (iNtRON Biotechnology, Seoul, Republic of Korea).
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4

Modulation of Platelet Aggregation by Ulmus Parvifolia Extract

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Washed platelets were pre-incubated with various concentrations of U. parvifolia extract along with 1 mM CaCl2 for 1 min at 37°C and then stimulated with collagen for 5 min under continuous stirring. Platelet aggregation was terminated by adding lysis buffer (PRO-PREP; iNtRON Biotechnology, Seoul, Korea), and protein concentration was estimated using BCS assay (PRO-MEASURE; iNtRON Biotechnology). Total platelet proteins were separated in a 10% SDS-PAGE and transferred to PVDF membranes. Membranes were blocked with 5% skim milk, probed with respective antibodies (i.e., Src, phospho-Src, ERK, phospho-ERK, JNK, phospho/JNK, p38MAPK, phospho-p38MAPK, phospho-PI3K, PI3K, Akt, phospho-Akt, VASP, phospho-VASPser157, PKAαβγ, and β-actin) and visualized using enhanced chemiluminescence.
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5

Platelet Activation and Signaling Pathways

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Platelets (5 × 108/mL) were activated with ADP for 5 min in the presence of 1mM CaCl2 with G-Rp4 (6.25–50μM) and instantly dissolved in sample buffer (0.125M Tris-HCl at pH 6.8, 2% fetal bovine serum, 2% β-mercaptoethanol, 20% glycerol, 0.02% bromophenol blue in the present of 1mM phenylmethylsulfonylfluoride, 2 μg/mL aprotinin, 1 μg/mL leupeptin, and 1 μg/mL pepstatin). Protein concentration was measured using bicinchoninic acid assay (PRO-MEASURE, iNtRON Biotechnology, Kyungki-Do, Korea) on ice. After boiling for 5 min, the proteins were resolved by electrophoresis in 10% sodium dodecyl sulfate polyacrylamide gel electrophoresis (SDS-PAGE) and then transferred to polyvinylidene difluoride (PVDF) membranes in a transfer buffer [25mM Tris (pH 8.5) and 20% methanol]. The membrane was blocked with 5% skim milk, washed, and subjected to immunoblotting with ERK1/2, p38 JNK, Akt, PI3K, PLCγ antibodies. The immunoblots were again incubated with horseradish peroxidase secondary antibody and the membranes were visualized using enhanced chemiluminescence (iNtRON Biotechnology).
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6

Western Blot Analysis of Liver Tissues

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Liver tissues were lysed using RIPA lysis buffer and centrifuged at 16,000g for 15 min. LX-2 cells were lysed in RIPA buffer (Cell Signaling Technology, Beverly, MA, USA) containing a cocktail of protease inhibitors (Calbiochem part of Merck KGaA, Darmstadt, Germany) on ice. The supernatants were then obtained after centrifugation at 16,200g for 15 min at 4℃. The protein concentrations of the cell lysates or liver tissues were measured by Bradford assay (Pro-Measure, iNtRON Biotechnology, Seoul, Korea) and the proteins were dissolved in the SDS sample buffer. Western blot analysis was conducted as previously described (Song et al. 2016 (link)). Samples were separated using sodium dodecyl sulfate–polyacrylamide gel electrophoresis (SDS-PAGE). The separated proteins were transferred to nitrocellulose membranes (GE Healthcare, Madison, WI, USA) and blocked with 5% skim milk. The proteins on the membrane were incubated with the primary antibodies (Supplementary Table 1) overnight. Horseradish peroxidase-conjugated IgG antibodies (Cell Signaling Technology, Beverly, MA, USA) were used as the secondary antibodies. After 2 h incubation with the secondary antibody, immune complexes were detected using the Immobilon Western Chemiluminescent HRP Substrate (Merck Millipore, Billerica, MA, USA).
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7

Platelet Signaling Pathway Analysis

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Various quantities of L. cuneata were preincubated with washed platelets for 1 min and stimulated with collagen for 5 min. Platelet aggregation was stopped by adding a lysis buffer (PRO-PREP; iNtRON Biotechnology, Seoul, Korea), and protein concentration was determined using the BCS assay (PRO-MEASURE; iNtRON Biotechnology). Total platelet proteins were isolated, separated by 10% sodium dodecyl-sulfate polyacrylamide gel electrophoresis and then transferred to polyvinylidene difluoride (PVDF) membranes. The membranes were blocked with 5% skim milk, probed with appropriate antibodies (phospho-ERK, phospho-JNK, phospho-p38MAPK, phospho-PI3K, phospho-Akt, etc.), and visualized using enhanced chemiluminescence.
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8

Calpain Activity Fluorometric Assay

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Calpain activity was evaluated using the Calpain Activity Fluorometric Assay Kit, in accordance with the manufacturer’s instructions. Briefly, cells were lysed in extraction buffer for 30 min on ice and centrifuged at 10,000 rpm for 1 min. Supernatants were collected and protein concentrations were determined using a protein assay kit (Pro-Measure, Intron Biotechnology, Seongnam, South Korea). Supernatants were incubated with substrate (Ac-LLY-AFC) and reaction buffer for 1 h at 37 °C in the dark. Upon cleavage of substrate, the fluorogenic portion was measured at excitation/emission wavelengths of 400/505 nm using a BioTek Synergy HT microplate reader. The results are expressed as relative fold changes from the control group. Additional reactions were performed to compare the control group with 1 μg Active Calpain I (BioVision) to the PHMG-p treated group with 20 μM Z-LLY-FMK (BioVision), a calpain inhibitor. The results are expressed as relative fold changes in fluorescence units.
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9

Protein Extraction and Western Blot Analysis

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Cell lysates were prepared in lysis buffer (120 mM NaCl, 40 mM Tris (pH 8), and 0.1% Nonidet P-40) on ice for 30 min and centrifuged at 13,000 rpm for 15 min. The supernatant was collected as the source of sample protein and concentrations were determined at 595 nm using a protein assay kit (Pro-Measure; Intron Biotechnology, Seongnam, Korea). Equal amounts of total cellular protein were separated by 10% sodium dodecyl sulfate polyacrylamide gel electrophoresis and transferred onto PVDF membranes. After blocking with 5% skim milk for 1 h, blots were incubated with primary antibodies overnight, followed by incubation with a horseradish peroxidase-conjugated secondary antibody. The protein bands were visualized using the ECL western blot detection system. ImageJ software (NIH, Bethesda, MD, USA) was used to calculate the integrated OD for the protein band and the values were normalized to an internal control.
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10

Endothelial Cell Protein Analysis

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Endothelial cells were lysed in CETi lysis buffer (TransLab, Daejeon, Korea) on ice for 30 min and centrifuged at 13,000 rpm for 15 min. Supernatants were collected, and protein concentrations were determined at 595 nm using a protein assay kit (Pro-Measure, iNtRON Biotechnology, Seongnam, Gyeonggi, Korea). Equal amounts of total cellular proteins were boiled for 5 min and subjected to 10% sodium dodecyl sulfate polyacrylamide gel electrophoresis (SDS-PAGE). The proteins were then transferred onto nitrocellulose membranes and incubated with primary antibodies followed by incubation with anti-mouse or anti-rabbit secondary antibody as appropriate. Finally, the densities of protein bands were measured using an enhanced Hisol ECL Plus Detection Kit (BioFact, Daejeon, Korea). Antibodies against p-eNOS, p-CaMKII, p-AMPK, and p-CaMKKβ, as well as anti-mouse and anti-rabbit IgG antibodies, were purchased from Cell Signaling Technology (Beverly, MA, USA). An antibody against β-actin was purchased from Santa Cruz Biotechnology (Santa Cruz, CA, USA).
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