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11 protocols using cd16 apc h7

1

Comprehensive Neutrophil Immunophenotyping

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Neutrophils were stained for 20 min at RT with an antibody panel containing CD66b-FITC 1:20, CD10-PE-Cy7 1:20, CD11b-AlexaFluor 700 1:66, CD16-APC-H7 1:66, CD14-BrilliantViolet 421 1:66, Siglec8-BrilliantViolet 510 1:66 (all from BD) and CD62L-APC 1:66 (Biolegend). Neutrophils were washed and analyzed on a Cytoflex flow cytometer (Beckman Coulter).
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Isolation and Phenotypic Analysis of Naïve B Cells

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PBMCs were isolated from whole blood collected from family members and healthy donors by ficoll-histopaque gradient centrifugation. For phenotypic staining, the following monoclonal antibodies were used: CD3-APC-H7, CD4-PerCP-Cy5.5, CD38-PerCP-Cy5.5, CD10-PECF594, CD21-APC, IgG PeCy7, CD14-PerCP, CD123-PE, CD56-PeCy7, CD11c-APC, CD16-APC-H7 (BD Biosciences, San Diego, CA, USA), CD8-APC-EF780, CD27-APC-EF780 (eBioscience, San Diego, CA, USA), CD19-BV650, CD24-BV605 (Biolegend, San Diego, CA, USA) and IgA-PE (Miltenyi Biotech, Bergisch Gladbach, Germany). Naïve B cells were enriched by negative selection using B-cell isolation kit (Stemcell, Vancouver, BC, Canada). Naïve B-cell purity was verified by flow cytometry to 98% purity.
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3

Phenotyping PBMCs Activated by LPS

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PBMCs (1 × 106/well) were stimulated overnight at 37°C with LPS 10μg/ml (E. coli serotype O55:B5; Alexis Biochemicals). After 1 h, 5μg/ml of brefeldin (Sigma-Aldrich) was added. After 12 hours of stimulation, cell surface staining was performed with CD14-BV605, HLA-DR BV650, CD16-APCH7, CD3-AF700 (BD Biosciences San Jose,CA). After washes in PBS, cells were fixed in Cytofix/Cytoperm buffer (BD Biosciences), for 30 min at 4°C, washed in PermWash buffer (BD Biosciences, and then stained for intra-cellular markers: IL8-BV510, TGFβ-PE-CF594, TNFα-APC (BD Biosciences San Jose, CA); IL10-AF488 (R&D systems); IL1β-PE (eBioscience, San Diego,CA); IL6-PECy7 (Biolegend, San Diego, CA) for 30 min at 4°C. After wash, PBMCs were resuspended in PBS, before their flow cytometry acquisition on LSR2 flow cytometer. Data were analyzed using FlowJo v9 (Tree Star, Inc.) and DIVA softwares (BD Biosciences).
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Multicolor Flow Cytometry Panel

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Anti-human CD66bFITC, CD3, CD19, CD14, CD163,CD138, CD56, CD15 all PE conjugated, HLADRV450, CD45V500, CD16APC-H7, CD14PE-Cy7, CD38PE-Cy7, CD 206APC were obtained (BD Pharmingen, Stockholm, Sweden). CD34PE, CD235aPE, CD11bPerCp-eFlour710 (eBioscience, San Diego, CA, USA), CD192APC, and CX3CR1AlexaFlour647 were from BioLegend, San Diego, CA, USA. Human FcReceptor binding inhibitor, 7AAD, and Annexin V-Alexa647, were obtained from eBioscience, San Diego, CA, USA, Sigma–Aldrich, (St. Louis, MO, USA), and Molecular Probes, Eugene, OR, USA, respectively.
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5

Immunohistochemistry and Flow Cytometry Analysis

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Immunohistochemistry. Immunohistochemical analysis was performed on 4 μm, formalin-fixed, paraffin-embedded sections in all cases. A broad immunohistochemical panel was utilized in the evaluation of the cases. Primary antibodies included CD34 (QBEnd/10, Leica (Novocastra)), CD117 (YR145, Cell Marque), CD71 (MRQ-48, Cell Marque), E-Cadherin (4A2C7, Life Technologies), Myeloperoxidase (Dako), Hemoglobin (Cell Marque), Glycophorin A (GA-R2, Ventana), CD61 and TP53 (DO-7, Ventana).

Flow cytometry. After isotonic erythrocyte lysis, flow cytometric immunophenotyping was performed on anticoagulated bone marrow aspirate specimens using previously described methods [10 (link)]. Samples were examined with flow cytometric immunophenotyping using two eight-color tubes containing antibodies from BD Biosciences (Tube1: CD13 PE, CD15 V450, CD16 APC-H7, CD33 PE-Cy7, CD34 PerCP-Cy5.5, CD45 V500, CD117 APC, HLA-DR FITC and Tube2: CD2 FITC, CD7 PE, CD34 PerCP-Cy5.5, CD36 APC, CD38 V450, CD45 V500, CD56 PE-Cy7, CD64 APC-H7). A total of 100, 000 events were collected per case. The data were analyzed using Kaluza software (Beckman-Coulter, Brea, CA) and/or Diva software (BD Biosciences).

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6

Multicolor Flow Cytometry: Neutrophil Characterization

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Whole blood and bone marrow samples were lysed using 0.84% NH4Cl and stained with the following antibodies: CD14—PerCP Cy5.5 (clone: M5E2, BD), CD80—FITC (Santa Cruz Biotechnology, Dallas, TX, United States), Siglec8—PE (clone: 7C9, BioLegend, San Diego, CA, United States), CD16—APC H7 (clone: 3G8, BD), CD66b—Alexa flour 700 (clone: G10F5, BioLegend), CD184—APC (clone: 12G5, eBioscience, San Diego, CA, United States), CD11b—BV785 (clone: ICRF44, BioLegend), CD62L—BV650 (clone: DREG-56, BioLegend), CD193—V510 (clone: 5 E8, BD), CD45—V450 (clone: 2D1, BD), HLA-DR—PE Cy7 (clone: L243, BD), and CD69—PE/DAZZLE (clone: FN50, BioLegend). The samples were then analyzed on FACS Aria Fusion (BD), for gating strategy see supplement figure 1. Single cells were gated, whereupon neutrophils were characterized as CD45+CD14CD193 cells and then further divided into mature, immature, and CD11b immature neutrophils based on their expression of CD11b and CD62L. When investigating the level of activation before and after isolation, as well as when analyzing the purity, the same antibody panel was used but the analysis was performed on Cytoflex (Beckman Coulter, Brea, CA, United States). All data was then analyzed using the Kaluza software (BD).
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7

M1 and M2 Macrophage Differentiation from Human Monocytes

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For the differentiation and polarization of isolated human monocytes into M1 and M2 macrophages, cells were cultured for 7 days at 37 °C in a 5% CO2 atmosphere in complete medium composed of RPMI 1640 medium supplemented with 10% fetal bovine serum and 1% penicillin–streptomycin solution in the presence or absence of different cytokines. Monocytes were seeded in 96- or 6-well culture plates at 2 × 105 cells/well or 1 × 106 cells/well, respectively, and the following cytokines were added for 7 days: 50 ng/mL GM-CSF (for M1 polarization) or 50 ng/mL M-CSF (for M2 polarization). At day 6, 100 ng/mL LPS was added to M1 polarized macrophages and 20 ng/mL IL-4 was added to M2 polarized macrophages. Seven days later, cells were detached from plates and stained with a cocktail of conjugated antibodies as follows: 10 µL CD14-FITC, 5 µL CD16-APC-H7, 5 µL CD80-PE-Cy5, 5 µL CD163-APC, and 5 µL CD200R-PE from BD Biosciences. Data acquisition was performed on 10,000 cells with constant PMT values on an FACS Canto II cytometer (BD Biosciences). Data analysis was carried out using Diva software (BD FACSDiva v9.0software, BD).
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8

Flow Cytometry Profiling of B Cells

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Thawed PBMCs were surface stained with a combination of CD3 Q655, CD14 Q655 (Invitrogen), CD56 PECy7, CD16 APC-H7 (BD) to exclude non–B cells, CD19 ECD (Beckman Coulter), CD20 V450, CD27 APC, CD38 PERCPCy5.5, CD86 PE, Ki67 Ax700, IgM PECy5, IgD FITC (all BD) to characterize CD19+ B cell subsets.
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9

Measuring Oxidative Burst in Immune Cells

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ROS production by neutrophils and monocytes was analyzed by incubating whole blood with dihydrorhodamine 123 (DHR) and catalase in the presence or absence of PMA. Red blood cells were lysed with BD FACS lysing solution (#349,202, BD) and stained with the following antibodies: CD16 APC-H7 (#561,306, BD), CD66b V450 (#561,649, BD), and CD45 V500-C (#655,873, BD). Analysis was performed on a BD FACSCanto II (BD). H2O2 production by MDMs with and without phorbol 12 myristate 13 acetate (PMA) stimulation (400 ng/mL) was assessed with the Amplex Red Kit (#A22188, Thermo Fisher Scientific) in Krebs–Ringer bicarbonate buffer (K40002, Merck). Briefly, 3 × 104 cells were cultured in RPMI 1640 containing 10% FCS in 96-well flat-bottom plates. MDMs were primed with 1000 IU/mL human recombinant interferon gamma (IFN-γ) (Imukin, Boehringer Ingelheim) 16 h before the experiment. H2O2 release was quantified with a Victor X4 plate reader (Perkin Elmer).
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10

Multiparametric Flow Cytometry Panel

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The following antibodies were used for flow cytometry: CD3-PerCP-Cy5.5 (clone SK7; eBioscience; used 1:20); CD4-FITC (clone RPA-T4; BD Biosciences; used 1:20), CD4-APC (clone RPA-T4; BD Biosciences; used 1:30), CD4-BV421 (clone SK3, Biolegend; used 1:100), CD8-BV421 (clone RPA-T8; BD Biosciences; used 1:50), CD14-APC-H7 (clone MoP9, BD Biosciences; used 1:100), CD16-APC-H7 (clone 3G8, BD Biosciences; used 1:100), CD19-FITC (clone 4G7, BD Biosciences; used 1:30), CD137-BV421 (clone 4B4-1; Biolegend; used 1:200), CD137-APC (clone 4B4-1; BD Biosciences; used 1:30), OX40-PE-Cy7 (clone Ber-ACT35, Biolegend), CD107-PE (clone H4A3, BD Biosciences; used 1:150) and PE-conjugated anti-mouse TCRβ constant domain (clone H57-597; BD Biosciences; used 1:150). The viability stain IR-Dye (Thermo Fisher, used 1:2,000) was used to identify live cells.
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