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14 protocols using sulindac sulfide

1

Enzymatic Assays for PDE Inhibitors

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Sulindac sulfide (SS) and papaverine were purchased from Sigma-Aldrich, while 1-(3-chlorophenylamino)-4-phenylphthalazine (MY5445) was purchased from BioMol. Recombinant PDE isozymes were purchased from BPS Biosciences. The PDE10 antibody was purchased from GeneTex, while the PDE5 antibody was purchased from Cell Signaling Technologies. Non-targeting control siRNA and PDE10 specific siRNAs were purchased from Qiagen. RNAiMAX transfection reagent was purchased from Invitrogen. DMSO was used as vehicle for all compounds unless otherwise noted. All other reagents were purchased from Sigma.
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2

In Vitro Metabolism and Inhibition

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PSA was provided by Medicon Pharmaceuticals, Inc. (Stony Brook, NY). Sulindac, Sulindac sulfone, Sulindac sulfide, dithiothreitol, methimazole, and CH3CN of HPLC grade were purchased from Sigma-Aldrich (St. Louis, MO). Quinidine and ketoconazole were purchased from Toronto Research Chemicals (North York, ON, Canada). Mouse and human liver microsomes, rat liver cytosol, recombinant human CYPs (CYP1A2, 2A6, 2B6, 2C9, 2C19, 2D6, 2E1 and 3A4), FMOs (FMO1, FMO3 and FMO5), NADPH regenerating solution, and cryopreserved rat hepatocytes were purchased from BD Biosciences (San Jose, CA). Human intestine, kidney and lung microsomes were purchased from XenoTech LLC (Lenexa, KS).
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3

Antioxidant Assays in Lymphocytes

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Sulindac sulfide and Cytochalasin-B were purchased from Sigma Chemicals Co. (St. Louis, USA). Phytohemagglutinin (PHA), Roswell Park Memorial Institute (RPMI-1640) medium, fetal bovine serum (FBS), penicillin and streptomycin were purchased from Biosera (USA). Moreover, malondialdehyde (MDA) assay kit (zellbio, Germany) and Superoxide Dismutase (SOD) assay kit (Randox, UK) were purchased. Giemsa stain, methanol and acetic acid were obtained from Merck (Germany).
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4

Xenograft Mouse Model for Cancer Research

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All animal procedures were performed in accordance with protocols approved by Institutional Animal Care and Use Committee of the University of California, San Francisco (IACUC protocol: AN187611) or the University of Pittsburgh (IACUC protocol: 13072053). Additionally, 5–6-week-old NOD.Cg-Prkdcscid Il2rgtm1Wjl/SzJ (NSG) mice were obtained from Jackson Laboratories (Bar Harbor, ME) or the UCSF Breeding Core Facility. Patient-derived xenografts (PDXs) were implanted into one flank of NSG mice under anesthesia and allowed to grow until palpable (~100 mm3). Mice (four mice with four tumors for each treatment group) were treated with vehicle control (saline), sulindac sulfide intraperitoneally (30 mg/kg; Sigma-Aldrich, St. Louis, MO, USA), erlotinib by oral gavage (50 mg/kg), or the combination of both as indicated throughout. Tumors were measured every other day by Vernier caliper in two dimensions and the volume was calculated as (larger measurement) × (smaller measurement)2/2.
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5

Characterization of Ovarian Cancer Cell Lines

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Established type I human EOC R182 cells and 01-28 (MyD88-negative) primary EOC cells were kindly provided by Prof. Gil Mor (Yale University School of Medicine, CT, USA). A2780 type II human EOC cells and SKOV3 (MyD88-positive) cells were purchased from American Type Culture Collection (Manassas, VA, USA). Cells were maintained in RPMI 1640 medium supplemented with 20% (v/v) heat-inactivated fetal bovine serum (FBS), 50 U/ml penicillin, and 50 mg/ml streptomycin (all from Welgene, Daegu, South Korea) in a 5% CO2 humidified incubator at 37°C. Cell numbers were counted by trypan blue (Sigma-Aldrich, St. Louis, MO, USA) dye exclusion assay using a hemocytometer. Sulindac sulfide (≥98% HPLC) was purchased from Sigma-Aldrich. Recombinant NAG-1 protein was purchased from Peprotech (Rocky Hill, NJ, USA).
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6

Evaluating Multidrug Resistance Transporters

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Sulindac sulfide, indomethacin and doxorubicin were purchased from Sigma-Aldrich (St. Louis, MO, USA). ABCC1 antibody (QCRL-1, monoclonal) was purchased from Alexis Biochemicals (San Diego, CA, USA). ABCB1 antibody was purchased from Covance (Princeton, NJ, USA). Secondary antibodies were ­purchased from Cell Signaling Technology (Danvers, MA, USA). All other reagents were purchased from Sigma-Aldrich unless otherwise stated.
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7

Cell Growth Inhibition by Anticancer Drugs

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Cells were plated at 10,000 cells per well in 24-well plates and allowed to adhere overnight. The following day cells were treated in triplicate with vehicle (DMSO), erlotinib (Tarceva, Astellas Pharm Global Development Inc. Northbrook, IL USA), lapatinib (Sigma-Aldrich, St. Louis, MO, USA), sulindac sulfide (Sigma-Aldrich, St. Louis, MO, USA), or indomethacin (Sigma-Aldrich, St. Louis, MO, USA) at the indicated concentration of drug for 48 h. Cell growth inhibition was determined by MTT assay and normalized to vehicle-treated wells.
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8

Modulation of Colon Organoid Signaling

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Inhibition of COX and EGFR pathways in colon organoids were performed with commercially available small chemicals sulindac sulfide (Sigma-Aldrich S3131) and erlotinib hydrochloride (Selleck Chemicals S1023). The drug concentrations (0.5 and 2 μM for erlotinib; 20 and 100 μM for sulindac) used were determined from previously published cell culture experiments and the predicted blood concentration needed to show efficacy in clinical studies [26] [27] [28] . Because 0.5 and 2 μM erlotinib showed similar effects on organoid gene expression (data not shown), 0.5 μM erlotinib was used throughout this study. Erlotinib and sulindac effects on gene expression were evaluated at 6 and 24 h. Drugs were studied individually and in combination to understand their synergistic effects on gene expression of different signaling pathways. A complete list of cultures used for drug treatments are shown in Table S4.
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9

Sulindac Sulfide Effects on HCT15 Cells

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HCT15 cells (CCL-225; American Type Culture Collection) were treated with 50 µM sulindac sulfide (Sigma-Aldrich) for 1-24 h and analysed by western blotting following our previously established protocols (Mladenova et al., 2011 (link), 2013 (link)). Only adherent cells were analysed for protein expression. The membranes were incubated with primary antibodies for 1 h at room temperature or overnight at 4°C (β-actin, 1:10,000, clone AC15, Sigma-Aldrich), phosphorylated c-Jun (Ser73) no. 9164, c-Jun no. 9165 (Cell Signaling Technology), E-cadherin (1:2000, no. 610181, BD Biosciences), β-catenin (1:2000, no. 610153, BD Biosciences), p120-catenin (1:1000, clone H-90, no. sc-13957, Santa Cruz Biotechnology). ImageJ densitometry software (National Institutes of Health) was used for quantitative densitometry analysis.
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10

Molecular Markers of Epithelial-Mesenchymal Transition

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Sulindac sulfide, aspirin, methanol, crystal violet, and G418 were obtained from Sigma-Aldrich (St. Louis, MO, USA). Antibodies against green fluorescent protein (GFP), Twist, Snail, vimentin, E-cadherin, α-tubulin, and GAPDH were obtained from Cell Signaling (Beverly, MA, USA). HMGA2 was obtained from Santa Cruz Biotechnology (Santa Cruz, CA, USA).
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