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Lipopolysaccharide lps from e coli

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Sourced in United States, Germany

Lipopolysaccharide (LPS) from E. coli is a laboratory-grade product. It is a major component of the outer membrane of Gram-negative bacteria, including E. coli. LPS functions as an endotoxin and is commonly used in research applications to study immune response and inflammation.

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30 protocols using lipopolysaccharide lps from e coli

1

Antimicrobial Susceptibility Assay Protocol

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Mueller-Hinton broth (MHB), Mueller-Hinton agar (MHA) and MRS powder were obtained from AoBoX (China). Bovine serum albumin (BSA), Triton X-100, polymyxin B, 4-(2-hydroxyethyl)piperazine-1-ethanesulfonic acid (HEPES), dimethyl sulfoxide (DMSO), BODIPY-TR-cadaverine (BC), 3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyltetrazolium bromide (MTT), 3,3′-dipropylthiadicarbocyanine (disc35), ethanol (analytical grade, 99%), tertiary butanol (analytical grade, 99%), acetone (analytical grade, 99%), glutaraldehyde (synthetic grade, 50% in H2O), lipoteichoic acid (LTA) from S. aureus and lipopolysaccharide (LPS) from E. coli were purchased from Sigma-Aldrich (China). Phosphate-buffered saline (PBS) solution, sodium chloride, potassium chloride, ammonium chloride, calcium chloride, zinc chloride, magnesium chloride, and ferric chloride were purchased from Kermel (China). Glucose (analytical grade) was obtained from Zhiyuan (Guangdong, China). DMEM phenol red-free medium and fetal bovine serum were purchased from Gibco (Beijing, China). All these reagents were used according to the required concentration range.
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2

Canine Whole Blood Cytokine Assay

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Whole blood from tubes containing lithium heparin were diluted 1:2 with RPMI 1,640 culture medium containing 200 U of penicillin/mL and 200 mg of streptomycin/mL, transferred to 24-well plates, and stimulated with lipoteichoic acid (LTA) from Streptococcus faecalis (final concentration 1 μg/mL, Sigma Aldrich), lipopolysaccharide (LPS) from E. coli 0127:B8 (final concentration, 100 ng/mL, Sigma Aldrich), or phosphate-buffered solution (PBS) as a negative control. Samples were incubated in the dark at 37°C in 5% CO2 for 24 h. The samples were then centrifuged (400 g for 7 min) and supernatant collected and stored at −80°C for batch analysis. For analysis, samples were thawed, and then tumor necrosis factor (TNF)-α, interleukin (IL)-6, IL-10, granulocyte-macrophage colony-stimulating factor (GM-CSF), IL-2, IL-8, and monocyte chemoattractant protein (MCP)-1 were quantified with a canine cytokine-specific multiplex bead-based assay (Milliplex MAP, EMD Millipore Corp.) as described elsewhere (16 (link)). The median fluorescence intensity and cytokine concentration in each sample was measured in duplicate with appropriate controls and associated data analysis software (Milliplex Analyst version 5.1, EMD Millipore Corp.). The lower limit of detection for TNF-α, IL-6, IL-10, GM-CSF, IL-2, and MCP-1 was 48.8 ρg/mL. The lower limit of detection for IL-8 was 195.3 ρg/mL.
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3

Modulation of Endothelial Cell Stress Pathways

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Human alpha thrombin was obtained from Enzyme Research Laboratories (South Bend, IN). Lipopolysaccharide (LPS) from E. coli, diethylaminoethyl (DEAE)-dextran, and 4-phenylbutyrate (4-PBA) were purchased from Sigma-Aldrich Chemical (St. Louis, MO). Polyclonal antibodies to VCAM-1, ICAM-1, IκBα, RelA/p65, and β-actin were from Santa Cruz Biotechnology (CA). Antibodies to VE-cadherin were purchased from Abcam (Cambridge, MA) and BD Biosciences (San Jose, CA). BiP/GRP78 polyclonal antibody was obtained from Cell Signaling Technology (Beverly, MA). Expression vector encoding Wild type BiP/GRP78 and dominant negative BiP/GRP78 were from Addgene. SubAB, SubA and the non-active derivative SubAA272B were purified as previously described28 (link),29 (link),46 (link). All other materials were from VWR Scientific Products Corporation (Gaithersburg, MD) and Fisher Scientific (Pittsburgh, PA).
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4

Molecular Mechanisms of LPS-Induced Inflammation

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The RPMI 1640 medium, fetal bovine serum (FBS), and phosphate-buffered saline (PBS) were procured from Hyclone. Lipopolysaccharide (LPS, From E. coli, Cat no: L-2630) was procured from Sigma (MO, USA). Primers for real-time reverse transcriptase–polymerase chain reaction (RT-PCR) and TRIzol (Cat no: 15596026) were purchased from Invitrogen. Revert Aid First-Strand cDNA Synthesis Kit (Cat no: k1621) and FastStart Universal SYBR Green Master (ROX) (Cat no: 4385610) were purchased from Roche. RIPA (Cat no: 9806S) and primary antibodies for Western blot analysis, including anti-IκB (Cat no: 76041S), anti-phospho-IκB (Ser32) (Cat no: 2859S), anti-NF-κB p65(Cat no: 8242S), anti- phospho-NF-κB p65(Ser536) (Cat no: 3033) anti-JAK2(Cat no: 3230S), anti-phospho-JAK2(Tyr1007/1008) (Cat no: 3771S), and anti-GAPDH (Cat no: 5174S), were purchased from Cell Signaling Technology. Secondary antibodies were obtained from Sigma. The Enhanced Chemiluminescence Solution Kit (Cat no: WBKLS0500) was obtained from Millipore (MA, USA). APC mouse anti-human CD16(Cat no: ab203883) and FITC mouse anti-human CD86(Cat no: ab213044) were purchased from Abcam (Cambs, UK). APC mouse anti-human CD40(Cat no: 555591) and FITC mouse anti-human CD23(Cat no: 561146) were purchased from BD Systems (BD Biosciences, USA).
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5

Cell Viability and Antioxidant Assays

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Dulbecco’s Modified Eagle Medium (DMEM) and fetal bovine serum (FBS) were purchased from Gibco (NY, USA). Penicillin-Streptomycin, Lipopolysaccharide (LPS) from E. coli, 3-(4,5-dim-ethyl-2-thiazolyl)-2,5-diphenyl-2-H-tetrazolium bromide (MTT), N-(1-naphthyl) ethylene dihydrochloride, sulfanilamide, 6-hydroxy-2,5,7,8-tetram-ethylchroman-2-carboxylic acid (trolox), 2,2’-azinobis (3-ethylbenzothiazoline-6-sulfonic acid (ABTS), quercetin and 1,1-diphenyl-2-picrylhyd-razyl (DPPH) were purchased from Sigma-Aldrich Inc. (St Louis, MO, USA). Phosphate Buffered Saline pH 7.0 (PBS), dimethylsulfoxide (DMSO), dichlo-romethane and methanol are of analytical grade.
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6

Gene Expression Analysis in Cell Lines

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An ELISA reader (StatFax-2100, Awareness Technology, Inc., Palm City, FL, USA) and CO2 incubator (SHEL LAB, Sheldon Manufacturing NC., Cornelius, OR, USA) were used. The Q5000 (Uv-Vis spectrophotometer Q5000, Quawell, San Jose, CA, USA) was used for quantification of the concentration of RNA and cDNA, and StepOnePlus real-time thermal cycler (Applied Biosystems, Life technology, Carlsbad, CA, USA) was used for qPCR. Human hepatoma HepG2, breast cancer MCF7, and normal liver THLE2 cell lines were purchased from the VACSERA and were also a gift from Dr. Mohammed Abu El-Magd, Faculty of Veterinary Medicine, Kafrelsheikh University, Egypt. Lipopolysaccharide (LPS, from E. coli) was purchased from Sigma Aldrich, St. Louis, MO, USA. Fetal calf serum (FCS) and penicillin/streptomycin solution were purchased from Hyclone, Logan, UT, USA. RNeasy Mini Kit (#74104) and Quantiscript Reverse Transcription Kit (#205310) were purchased from Qiagen (Hilden, Germany). Finally, 2X Maxima SYBR Green/ROX qPCR Master Mix was obtained from Thermo scientific, Waltham, MA, USA, #K0221.
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7

Diaphragm Contractility Changes in Sepsis

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Studies were performed on 10 mice to determine how infection alters the relationship between twitch and maximum diaphragmatic specific force generation. These experiments were approved by the University of Kentucky Institutional Animal Care and Use Committee (IACUC). Five mice were given saline intraperitoneally (0.5 ml) and the remaining five were given endotoxin (i.e., 60,000,000 units/kg lipopolysaccharide (LPS) from E. coli, 55:B5, Sigma-Aldrich, St. Louis, MO, USA in 0.5 ml saline). Animals were sacrificed at 24 hours after injections and the diaphragm excised. Diaphragm strips were then dissected and used to assess diaphragm force generation in vitro as described in detail in Additional file 1 and as described in previous publications [10 (link), 11 (link)].
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8

Reagents for Macrophage Metabolism Analysis

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RPMI-1640 with Glutamax, non-essential amino acids (NEAA), sodium pyruvate, and penicillin–streptomycin (P/S) were from Gibco (Paisley, Scotland, UK). Fetal bovine serum (FBS) was purchased from Life Science Production (Barnet, UK). Cytokines M-CSF, IL-4, and IFN-γ were purchased from Biolegend (San Diego, CA, USA). 2-Deoxy-D-glucose (2-DG), Oligomycin (Oligo), Carbonyl cyanide-4-(trifluoromethoxy) phenylhydrazone (FCCP), Rotenone (R/Rot,), and Antimycin A (AA) were purchased from Abcam (Cambridge, UK). Perhexiline (PerHx) and H531 (Hx) were purchased from Tocris (Bristol, UK). CB-839 was purchased from FOCUS Biomolecules (Plymouth Meeting, PA, USA). Trimetazidine (TMZ) was purchased from Sigma-Aldrich (St. Louis, MO, USA). VLX-600 (VLX) was purchased from Cayman Chemical (Ann Arbor, MI, USA). Lipopolysaccharide (LPS) from E. Coli was obtained from Sigma-Aldrich. Any other material used was of analytical grade.
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9

Inflammatory Response Modulation via Natural Compounds

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Lipopolysaccharide (LPS) from E.Coli (Sigma Aldrich, Saint Louis, USA) was dissolved in phosphate buffer saline with no Calcium or Magnesium (DPBS, Lonza, Basel, Switzerland) in order to reach a concentration of 1 mg/ml, and was used once a final concentration of 1 μg/ml was attained. Curcumin (Turmeric extract granules, 95% curcuminoids, Natural, St Sylvain d’Anjou, France) was resuspended in dimethyl sulfoxide (DMSO, Dutscher, Bernolsheim, France). For the harpagophytum (Harpagophytum procumbens, Biosearch Life, Granada, Spain) and bromelain (Bromelain 2500 GDU, Cambridge Commodities Ltd., Ely, UK) extracts, the suspension was carried out in DPBS. The concentration of curcumin used was 13 μM (stock solution 130 mM), bromelain 14.7 μg/ml (stock solution 147 mg/ml) and harpagophytum 36 μg/ml (360 mg/ml).
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10

Preparation and Use of Turmeric Extract

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The extraction of turmeric (TE obtained by Symrise AG, Holzminden, Germany) was carried out with hexane, and the crude extract was then adjusted to a specified color value of 27% using propylene glycol. To enable further use, the extract was bound to maltodextrin as a carrier substance (60% of the final extract). For our study, the extract was dissolved in distilled H2O and used in final concentrations of 50–500 µg/mL. Curcumin (10 µM), THC (25 µM), and curcumenol (20 µM) (all Cayman Chemical Company, Ann Arbor, MI, USA, distributed by BioMol, Hamburg, Germany) were dissolved and diluted into their final concentrations using DMSO (Merck KGaA, Darmstadt, Germany). Lipopolysaccharide (LPS) from E. coli (O127:B8; Sigma-Aldrich GmbH, Taufkirchen, Germany) was diluted in phosphate buffered saline (PBS; Roche Diagnostics, Mannheim, Germany) and used in a final concentration of 10 ng/mL in the cultures.
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