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4 protocols using mab3174

1

Visualizing COVID-19 Lung Immune Response

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Paraffin-embedded autopsy lung specimens from 3 cases of COVID-19 (Weill Cornell Medical Center) were stained largely as previously described.22 Commercially available healthy lung tissue (US Biomax; NCT086) served as a control. The tissue sections available were only 4 to 5 μm thick, making detection of extensive lattices of extracellular NETs difficult. Briefly, to stain for neutrophils and NETs, we used mouse anti-human MPO (1:400, MAB3174; R&D Systems) and rabbit anti-human citrullinated histone H3 (1:250, ab5103; Abcam) antibodies. To stain for NETs and PF4, we used anti-citrullinated histone H3 and mouse anti-human PF4 (1:200sc-398979; Santa Cruz Biotechnology) antibodies with Alexa Fluor 488–conjugated anti-mouse and Alexa Fluor 568–conjugated anti-rabbit secondary antibodies, blocked using a M.O.M. (Mouse on Mouse) Immunodetection Kit, Basic (BMK-2202; Vector Laboratories), followed by incubation with anti-MPO antibodies and Alexa Fluor 647–conjugated anti-mouse antibody. We used 4′,6-diamidino-2-phenylindole (DAPI) as a nuclear counterstain (Thermo Fisher Scientific). Images were captured using confocal microscopy (Leica SP8) and analyzed using Volocity software (version 6.3.0; PerkinElmer).
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2

Quantifying Immune Cell Infiltrates in Skin

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Immunohistochemical stainings with CD163 for macrophages (1:400 overnight 4° C, monoclonal rabbit anti‐CD163 [C‐terminal], Abcam, ab189915, EPR14643‐36, Cambridge, UK) and myeloperoxidase (MPO) for neutrophils (1:400 overnight 4° C, monoclonal mouse‐anti‐human‐myeloperoxidase antibody, R&D Systems, Inc., MAB3174, 392,105, Minneapolis, USA) as well as a routine toluidine‐blue‐staining for mast cell numbers (0.5% aqueous toluidine blue solution for 24 h) were performed from paraffin‐embedded lesional skin samples (MPO: UV = 36, CSU = 27; CD163: UV = 35, CSU = 27; Toluidine blue: UV = 20, CSU = 18), each section cut at 5 µm. An immunohistochemistry protocol with Polymer‐labelled secondary antibodies (anti‐mouse: EnVision+/HRP mouse, Dako, K400011‐2, Glostrup, Denkmark; anti‐rabbit: EnVision+/HRP rabbit, Dako, K4010, Glostrup, Denmark; both applied for 30 min at room temperature) and AEC + ‐substrate system (Dako, K346111‐2, Glostrup, Denmark, applied for 10 min at room temperature) was used for detecting the primary antibodies. For the immunohistological stainings, photos were taken by an Axioplan‐II‐microscope (Zeiss) at 200× magnification and % of positivity of stained area was assessed by Fiji software.
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3

Neutrophil and NET Staining Protocol

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To stain for neutrophils and NETs, paraffin embedded sections of lungs were first de-paraffinized, and re-hydrated using standard protocols. Slides were boiled in Tris–EDTA buffer (pH = 9) for 8 min for antigen retrieval and not quenched for H202 afterward. Sections were then blocked with Fc Receptor blocker (#NB309, Innovex) for 30 min, and incubated with 1X donkey blocking buffer (5% donkey serum, 2.5% BSA, 0.1% Triton X-100 in PBS) for one hour. Mouse anti-human MPO (1:500, MAB3174; R&D Systems) and rabbit anti-human citrullinated histone H3 (1:250, ab5103; Abcam) antibodies were incubated together in 0.5X donkey blocking buffer at 4 C overnight. Then sections were incubated with Alexa Fluor 488 conjugated donkey anti-mouse (1:400, A21202, Thermo Fisher Scientific) and Alexa Fluor 568 conjugated donkey anti-rabbit (1:400, A10042, Thermo Fisher Scientific) secondary antibodies together in 0.5X donkey blocking buffer at room temperature for one hour. 4′,6-diamidino-2-phenylindole (DAPI) was used as a nuclear counterstain (Thermo Fisher Scientific, D1306). Images were collected at 40 × magnification using a Leica TCS SP8 confocal microscope (40 × magnification) and were processed with Leica LAS X software.
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4

Immunohistochemical Analysis of FACAS Skin

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Paraffin sections (5 µm) of a FACAS patient skin sample and control skin were prepared as explained above, and processed for routine (hematoxylin/eosin) and immunohistological stainings. We used an immunohistochemistry protocol (streptavidin–biotin labeling) employing primary antibodies targeting MPO (MAB3174, R&D Systems) 1:400 overnight at 4 °C or CD163 (ab189915, Abcam) 1:400 overnight at 4 °C. After washing 3 × 5 min with TBS, REAL Detection System Alkaline Phosphatase/RED (K5005, Dako) for MPO staining or labeled polymer-HRP anti-rabbit (K4011, Dako) together with AEC + high sensitivity substrate chromogen ready-to-use (K3461, Dako) for CD163 staining were applied according to the manufacturer’s instructions, and subsequently analyzed by bright-field microscopy. Samples of tonsil tissue served as positive controls. Sections omitting the primary antibody served as negative controls.
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