The largest database of trusted experimental protocols

Ab154141

Manufactured by Abcam
Sourced in United States

Ab154141 is a laboratory equipment product offered by Abcam. It is a device designed for a specific purpose within a laboratory setting. The core function of this product is to facilitate a particular task or procedure required in scientific research or analysis. No further details or interpretations about the intended use of this product are provided.

Automatically generated - may contain errors

6 protocols using ab154141

1

Immunofluorescence Staining of ALS-associated Proteins

Check if the same lab product or an alternative is used in the 5 most similar protocols
First, 5 × 103 cells/chamber HAP1 cells were cultured in an 8-well slide and chamber (192-008, Watson, Tokyo, Japan). Cells were fixed with 4% PFA in PBS (26123-55, Nacalai Tesque), washed with PBS three times, and blocked with blocking buffer (5% skim milk with 0.3% triton X-100). Primary antibodies (anti-TLS/FUS (ab154141, Abcam, Waltham, MA, USA), anti-ZAP3 (A304-038A, Bethyl, Montgomery, TX, USA), anti-Matrin3 (A300-590A, Bethyl)) were diluted with blocking buffer at 1:1000, anti-TIA-1 (ab140595, Abcam) and anti-TDP-43 (12892-1-AP, Proteintech, Rosemont, IL, USA) were diluted at 1:250, and incubated at 4 °C for 16 h. Cells were washed for three times, and incubated with secondary antibodies (AlexaFlour 647 goat anti-rabbit IgG (A21244, Invitrogen) and Alexa Fluor 555 donkey anti-mouse IgG (A31570, Invitrogen), diluted with blocking buffer at 1:1000) at 37 °C for 1 h. Cells were washed again and mounted with Vectashield (H-1800, Vector Laboratories, Burlingame, CA, USA), and the cells were observed under fluorescent microscopy (BZ-X700).
+ Open protocol
+ Expand
2

Western Blot Analysis of Protein Targets

Check if the same lab product or an alternative is used in the 5 most similar protocols
Western blot analysis was performed as previously described [62 (link)]. Antibodies were anti-ACTB mAb (017-24551, Wako Pure Chemical, Osaka, Japan), anti-GFP (GF-200, Nacalai Tesque), and anti-TLS/FUS (ab154141, Abcam, MA, USA) for primary antibodies at the concentration of 1:2000, anti-rabbit IgG HRP-linked antibody (7074S, Cell Signaling Technology, Danvers, MA, USA) and anti-mouse immunoglobulins/HRP (P0161, DAKO, Glostrup, Denmark) for secondary antibodies at the concentration of 1:5000.
+ Open protocol
+ Expand
3

Immunofluorescence Imaging of SDC1, EWSR1, and FUS

Check if the same lab product or an alternative is used in the 5 most similar protocols
STAV-AB cells were seeded on cover slips in 24-well plates and fixed, after 24 h, in 4% PFA for 15 min at room temperature. Cells were permeabilized using 0.1% Triton in PBS (PBST) for 15 min. Blocking was performed for 1 h with 3% Bovine Serum Albumin (BSA) in PBST. Co-staining was then performed with a combination of antibodies against SDC1 (1:500, rabbit monoclonal anti-SDC1, ab128936, Abcam, Cambridge, UK) and either EWSR1 (1:200, rat monoclonal anti-EWSR1/EWS, ab252829, Abcam) or FUS (1:200, mouse monoclonal anti-TLS/FUS, ab154141, Abcam, Cambridge, UK) in 0.1% BSA in PBST. The following secondary antibodies were used: goat anti-rabbit 555 for SDC1, goat anti-rat 488 for EWSR1 and goat anti-mouse 488 for FUS detection (ThermoFisher, Stockholm, Sweden). Cells were mounted and imaged through a Zeiss LSM800 confocal microscope (Stockholm, Sweden). Images were imported into Image J.
+ Open protocol
+ Expand
4

Western Blot Analysis of FUS Protein

Check if the same lab product or an alternative is used in the 5 most similar protocols
Lysates were mixed with 4× NuPAGE LDS Sample Buffer (Thermo NP0008) and run through AnyKD precast gels (BioRad 4569034) at 80 V for 2 h. Gels were transferred through either a Trans-Blot Turbo Transfer System (Bio-Rad 1704150) or eBlot L1 (GenScript L00686) onto nitrocellulose membranes (BioRad 1620112). Membranes were blocked with 6% milk (BioRad 1706404) in Tris-buffered saline (TBS). Primary and secondary antibodies were diluted in TBS with 0.1% Tween-20 (Sigma P7949). The following primary antibodies were used to probe the blots: FUS antibodies (Santa Cruz 373698, Abcam ab154141, Bethyl A300-293A, custom rabbit phospho-FUS antibodies), gamma tubulin (Sigma T6557), and GFP (Roche 11814460001). Primary antibodies were detected with secondaries conjugated to IRDye fluorescent probes (LI-COR 926-68021, 926-32210). Blots were imaged with the Odyssey CLx imaging system (LI-COR). Band densitometry quantification was done using Image Studio software (Li-COR). Phosphobands were normalized to endogenous FUS band intensity.
+ Open protocol
+ Expand
5

Worm Protein Extraction and Western Blot Analysis

Check if the same lab product or an alternative is used in the 5 most similar protocols
Worms were lysed in protein lysis buffer [50 mM tris-HCl (pH 7.8), 150 mM NaCl, 1% sodium deoxycholate, 1 mM EDTA, 0.1% SDS, 1% Triton X-100, and protease inhibitor (Roche)] using a Precellys 24 homogenizer. Worm lysates were centrifuged at 10,000 rpm for 10 min at 4°C, and the supernatant was collected. Protein concentrations were determined with standard BCA (bicinchoninic acid assay) protein assay (Thermo Fisher Scientific). Twenty micrograms of total protein was separated by SDS–polyacrylamide gel electrophoresis (PAGE), transferred to nitrocellulose membranes (Millipore), and subjected to immunoblotting. Western blot analysis was performed with anti-GFP antibody (1:5000; AMSBIO, TP401), FUS (1:1000; Abcam, ab154141), TDP43 (1:1000; Abcam, ab225710), and α-tubulin (1:20,000; Sigma-Aldrich, T6199).
+ Open protocol
+ Expand
6

Quantifying Protein Aggregation in C. elegans

Check if the same lab product or an alternative is used in the 5 most similar protocols
C. elegans strains were grown from hatching on HT115 E. coli carrying either empty vector or RNAi clones. At day 3 of adulthood, worms were collected with M9 buffer, and worm pellets were frozen with liquid N2. Frozen worm pellets were thawed on ice, and worm extracts were generated by glass bead disruption on ice in nondenaturing lysis buffer [50 mM Hepes (pH 7.4), 1 mM EDTA, 150 mM NaCl, and 1% Triton X-100] supplemented with EDTA-free protease inhibitor cocktail (Roche). Worm debris was removed with 8000g spin for 5 min. One hundred micrograms of protein extract was supplemented with SDS at a final concentration of 0.5% and loaded onto a cellulose acetate membrane assembled in a slot blot apparatus (Bio-Rad). Then, the membrane was washed with 0.2% SDS and SDS-resistant protein aggregates were assessed by immunoblotting using antibodies against GFP (1:5000; AMSBIO, TP401), FUS (1:1000; Abcam, ab154141), and TDP43 (1:1000; Abcam, ab225710). Extracts were also analyzed by SDS-PAGE/Western blot with anti-GFP, anti-FUS, anti-TDP43, and anti–α-tubulin (1:20,000; Sigma-Aldrich, T6199).
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!