The largest database of trusted experimental protocols

Den 1 mcfarland densitometer

Manufactured by Biosan
Sourced in Latvia

The DEN-1 McFarland densitometer is a compact and portable instrument designed for measuring the turbidity of liquid samples. It utilizes the McFarland standard to determine the approximate cell concentration of bacterial or yeast suspensions.

Automatically generated - may contain errors

12 protocols using den 1 mcfarland densitometer

1

Characterizing Growth Kinetics of Clostridium perfringens

Check if the same lab product or an alternative is used in the 5 most similar protocols
Bacterial strains were revitalized and cultivated overnight in Schaedler Anaerobe Broth in anaerobic conditions at 37 °C. The overnight culture was transferred onto Schaedler Anaerobe Agar and cultivated overnight in anaerobic conditions at 37 °C. One isolated colony was transferred to BBL Fluid Thioglycolate Medium and all cultures were incubated at 37 °C in anaerobic conditions (Anaerobic & Microaerophilic Workstation, Baker Ruskinn) to reach optical density of 0.1 for each bacterial strain. Growth curves were generated for eight C. perfringens strains (NCTC 8084, 8504, 3180, 6121, 8503, 6719, 8237, and 10719). Measurement of optical density of bacterial suspensions was performed according to McFarland on a DEN-1 McFarland densitometer (Biosan, Riga, Latvia). Optical density was recorded at 0, 6, 12, 24, and 48 h and the curves were constructed and smoothed.
+ Open protocol
+ Expand
2

Antibacterial Activity of Plant Extracts

Check if the same lab product or an alternative is used in the 5 most similar protocols
We tested the antibacterial activity of the extracts in a dilution series (25–0.39 mg/mL) in triplicate using a micro-broth dilution test against P. alvei CCM 2051 provided by the Czech Collection of Microorganisms (Masaryk University, Brno, Czech Republic) as previously described [74 (link)] with modifications. Briefly, extracts were diluted 1:1 with Mueller–Hinton broth, yeast extract, potassium phosphate, glucose, and pyruvate (MYPGP), and 100 µL of the solution was pipetted to the first row of the microdilution 96-well plate. A two-fold dilution series was prepared by transferring the extract solutions (50 µL) to the next rows containing 50 µL of the MYPGP. Dilutions of methanol were included as a solvent growth control. The lyophilized bacteria were cultivated at 37 °C for ~24 or ~48 h on MYPGP agar. The inoculum was diluted in sterile water and adjusted to 0.5 McFarland units using the DEN-1 McFarland densitometer (BioSan, Riga, Latvia). The bacterial suspension was diluted 1:150 with the MYPGP (~106 CFU/mL), and 50 µL was added to each well within 15 min. Bacterial growth was measured at 625 nm using an xMark spectrophotometer (Bio-Rad, Hercules, CA, USA). Minimum inhibitory concentrations (MICs) were defined as the lowest concentration of extract or standard that inhibited growth by at least 80% relative to the control (bacterial suspension with no extract/solvent).
+ Open protocol
+ Expand
3

Preparation of B. licheniformis Cell-Free Supernatant

Check if the same lab product or an alternative is used in the 5 most similar protocols
B. licheniformis A-1-5B-AP, A-2-11B-AP and DSM 13 were inoculated on Brain Heart Infusion (BHI) agar (HiMedia, Mumbai, India) and grown at 37 °C for 24 h under aerobic conditions. A standardized suspension of the individual strains was prepared by resuspending the solitary colonies in 3 mL of saline solution, and turbidity was then adjusted to 1–1.1 McFarland at 565 nm wavelength (DEN-1 McFarland densitometer, Biosan, Riga, Latvia). After that, 0.5 mL suspension was inoculated into 50 mL BHI broth (HiMedia, Mumbai, India) and incubated on a shaker aerobically for 24 h at 37 °C and 119 rpm (SKO-D XL, Agrolab, Pischelsdorf, Austria). BHI broth inoculated with saline solution was used as a control. Subsequently, the inoculated BHI broth were centrifuged for 40 min at 4 °C and 4500 rpm (ROTINA 420R, Hettich, Tuttlingen, Germany). The obtained cell-free supernatant (CFS) was neutralized with 10 M NaOH to pH 7 and filtered through a microbiological filter with a pore size of 0.22 μm (Minasart; Biotech, Göttingen, Germany).
+ Open protocol
+ Expand
4

Antifungal Activity of Chitosan-Gelled Microemulsions

Check if the same lab product or an alternative is used in the 5 most similar protocols
The antifungal activity of the studied chitosan-gelled MEs loaded with FZ was evaluated against Candida albicans ATCC-90028 strains using the agar plate diffusion method with the modification that the gel samples added to wells made in the agar medium in Petri dishes. Sabouraud agar medium containing chloramphenicol and gentamicin was used as culture medium. The colonies were diluted with 0.85% sodium chloride sterile solution, and the concentration of the obtained suspensions was adjusted to approximately 3 × 108 colony-forming units/mL using a turbidimeter (DEN-1 McFarland Densitometer, Biosan, Riga, Latvia). The plates with Sabouraud agar medium were inoculated with the C. albicans suspension, then allowed for 5 min to adsorb the inoculum. In the next step, a well (one for the control gel and the other for the test gel) was made in the middle of each half of the plate by cutting under sterile conditions an 8 mm diameter portion of medium, then each well was filled with the sample. The plates were then incubated at 37 ± 0.1 °C for 48 h. After the incubation period, the inhibition zones diameters (mm) were measured and the mean values of three measurements (±SD) were used to express the antifungal activity of the chitosan-gelled MEs.
+ Open protocol
+ Expand
5

Haemophilus parasuis Serotype 5 Cultivation

Check if the same lab product or an alternative is used in the 5 most similar protocols

Haemophilus parasuis serotype 5, strain HP 132 (CAPM 6475) originating from a pig with meningitis was obtained from CAPM. Bacteria were grown on Mueller–Hinton agar broth with yeast extract and 5% sheep blood (LabMediaServis) overnight at 37 °C, and non-confluent growth was harvested and resuspended in calcium–magnesium free Dulbecco’s phosphate-buffered saline (D-PBS, Lonza). Bacteria were washed twice with D-PBS and resuspended in D-PBS, with the final concentration adjusted to optical density of 2.5 equivalent to 109 CFU/mL, using a turbidimeter (DEN-1 McFarland densitometer, Biosan).
+ Open protocol
+ Expand
6

Preparation of Fungal Inoculum Stocks

Check if the same lab product or an alternative is used in the 5 most similar protocols
Lyophilized pellets were rehydrated on Columbia agar plates with sheep blood plus (CBA, PB5039A; Oxoid, Wesel, Germany) and Sabouraud dextrose agar plates (254039; Becton Dickinson) and grown under optimal growth conditions according to the manufacturer's instructions (Table 1). The cultures were visually controlled for pure growth and the typical morphology of the colonies and resuspended in isotonic saline solution. Concentrations were adjusted to a turbidity of 1.0 according to the McFarland turbidity standard using a DEN-1 McFarland densitometer (Biosan, Riga, Latvia), which equates to a CFU of 3 × 106/mL for C. albicans and 3 × 107/mL for the other strains, except A. brasiliensis. Dilutions were prepared with saline solution to 300 CFU/mL. One hundred microliters of this concentration were added to the blood culture bottles to obtain a spiking of 10–100 microorganisms. For A. brasiliensis, which cannot be prepared according to McFarland, an area of 2 cm2 of fungal growth presenting a fruiting body and mycelium was taken from the agar plate, resuspended in 10 mL of saline solution, and diluted by a factor of 10−4. The CFU was verified by plating 100 µL of each strain on agar plates (Table 1). The used test media were monitored for sterility at the end of each preparation.
+ Open protocol
+ Expand
7

Antimicrobial Activity Evaluation by Broth Microdilution

Check if the same lab product or an alternative is used in the 5 most similar protocols
Antimicrobial activity was evaluated using a broth microdilution method [55 ]. Bacterial suspensions were made from overnight cultures in Mueller–Hinton broth (mold suspension was made in SDB), and their turbidity was standardized to 0.5 McFarland using densitometer (DEN-1 McFarland Densitometer, Biosan). The final density of bacterial inoculums was 5 × 105 CFU (colony forming units), while mold’s final inoculum size corresponded to 1 × 104. Stock solutions of the DME were prepared in pure dimethyl sulfoxide (DMSO) and serially diluted (the diluting factor 2) with sterile saline in the concentration range 0.001–20.00 mg/mL. The highest final concentration of DMSO in each well was 10%. After making dilutions of the test substances, the inoculum was added to all wells and the plates were incubated at 37 °C during 24 h. Streptomycin and nystatin served as positive controls as antibacterial and antifungal agents, respectively, while one non-inoculated well, free of antimicrobial agent, was included to ensure the medium sterility. The bacterial growth was determined by adding 20 μL of 0.5% triphenyltetrazolium chloride (TTC) aqueous solution. MIC was defined as the lowest concentration of the test compound that inhibited visible growth (red colored pellet on the bottom of the wells after the addition of TTC). All experiments were done in triplicate.
+ Open protocol
+ Expand
8

Anaerobic Incubation of S. mutans on Blood Agar

Check if the same lab product or an alternative is used in the 5 most similar protocols
The samples were anaerobically incubated on an agar–blood culture medium (Columbia Agar + 5% ram blood, Mediclim, Romania) for 24 h at 37 °C in a thermostat (Jouan IG150 Infrared-Controlled CO2 Incubator, Germany). An ATCC 25175 suspension of S. mutans obtained from the Microbiology Department of General Medicine was prepared at 0.5 McFarland [12 (link)] with a densitometer device (DEN-1 McFarland Densitometer, Biosan, BS-050102-AAF, LATVIA). Eighteen teeth were contaminated with 0.2 mL of S. mutans suspension (107 CFU/mL) [13 (link)], and all the samples were placed in a sterile container individually for 48 h at 37 °C in a thermostat (Figure 1 and Figure 2).
+ Open protocol
+ Expand
9

Anaerobic Subgingival Plaque Sampling

Check if the same lab product or an alternative is used in the 5 most similar protocols
A subgingival plaque sample was collected by the same investigator using a periodontal curette at the distal site of lower molars. The sample was then inoculated in an anaerobe basal broth and placed in an anaerobic jar (AnaeroPack, Mitsubishi Gas Chemical Co., Tokyo, Japan) to incubate for 24 hours in an anaerobic chamber. After 24 hours, 10 mL of the anaerobe basal broth was adjusted to 0.5 McFarland concentration by using a densitometer device (DEN-1 McFarland Densitometer, Biosan, BS-050102-AAF, Latvia).
+ Open protocol
+ Expand
10

Dual-Light Antibacterial Treatment for S. oralis

Check if the same lab product or an alternative is used in the 5 most similar protocols
Figure 1 describes a brief version of the study protocol. The incubation of S. oralis strain (ATCC 35037) was performed using a (NuAire DH autoflow 5500, NuAire Inc, US) equipment. The subsequent bacterial suspension was obtained by diluting it to a 2.9 McFarland concentration (Den 1 McFarland Densitometer, Biosan, Riga Latvia) using 0.9% saline solution. Three biofilm cultures were prepared for the control group and six biofilms for the experiment groups. Each biofilm was cultured for four days. A dual-light total radiant exposure of 100 J was applied for each biofilm with a specially prepared LED light applicator (Koite Health Oy, Espoo, Finland). Figure 1 describes the overview of dual-light antibacterial treatment mechanism of action. After the treatment, the biofilms underwent plating and further incubation for colony-forming unit (CFU) counting. The exact rates of irradiances between indocyanine green antibacterial photodynamic therapy (aPDT) 135 mW/cm 2 and antibacterial blue light (aBL) 42 mW/cm 2 are presented in Table 1. A detailed version of the study protocol can be found online (8) (link), and the protocol, in brief, is shown in Figure 1.
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!