The largest database of trusted experimental protocols

6 protocols using heavy mineral oil

1

Time-lapse Imaging of Cellular Extracts

Check if the same lab product or an alternative is used in the 5 most similar protocols
For imaging, 3 μl of extract was spread on the bottom of a well of a Corning 96-well polystyrene plate (#3368) and covered with 200 μl of heavy mineral oil (Sigma). The extract was imaged in time-lapse using a Leica epifluorescence microscope and a 5x objective. Acquisition frequency varied between 30 s to 2 min per frame.
+ Open protocol
+ Expand
2

Lipid Vesicle Preparation Protocol

Check if the same lab product or an alternative is used in the 5 most similar protocols
1,2-diphytanoyl-sn-glycero-3-phosphocholine (DiPhyPC); 1,2-dipalmitoyl-sn-glycero-3-phosphocholine (DPPC); 1,2-diphytanoyl-sn-glycero-3-phosphoglycerol (DiPhyPG); and 1,2-dipalmitoyl-sn-glycero-3-phosphoglycerol (DPPG); were obtained from Avanti Polar Lipids (Alabaster, AL). Cholesterol was obtained from Sigma (St. Louis, MO). All lipids were used without further purification and were stored in chloroform at −20°C until use. The fluorescently labeled lipid Texas Red 1,2-dipalmitoyl-sn-glycero-3-phosphoethanolamine (TR-DPPE, Invitrogen, Eugene, OR) was included at 0.8 mol% to visualize vesicles and to provide contrast between phases. Heavy mineral oil was obtained from Sigma (St. Louis, MO). Phosphate buffered saline (PBS) was obtained from Fisher Scientific (Fair Lawn, NJ), with a formulation of 155 mM NaCl, 2.71 mM Na2HP04, 1.54 mM KH2PO4, and pH 7.2. To maintain a difference in density between the inside and outside of the vesicle, the inner and outer aqueous solutions contained 100 mM glucose or sucrose, respectively. 18 MΩ-cm water was produced by a Barnstead filtration system (Barnstead, MA). All other chemicals were obtained from Sigma (St. Louis, MO).
+ Open protocol
+ Expand
3

Liposome Preparation and Characterization

Check if the same lab product or an alternative is used in the 5 most similar protocols
All the lipids (PCs and PEs) used in preparing liposomes (Table 1) were purchased from Corden Pharma Switzerland LLC, Liestal, CH, except that DHPC (1,2-diheptanoyl-sn-glycero-3-phosphocholine), DPHPC (1,2-diphytanoyl-sn-glycero-3-phosphocholine), POPE (1-palmitoyl-2-oleoyl-sn-glycero-3-phosphoethanolamine) were from Avanti Lipids Polar, Inc., Alabaster, AL. Calcein (Solarbio, Beijing, China) was used as a fluorescent dye to mark the contents of GVs. Organic solvents, including mineral oil (liquid paraffin, d = 0.840 g/mL), were from Adamas-Beta Reagent (Shanghai, China), heavy mineral oil from Sigma–Aldrich (St. Louis, MO, USA), and chloroform and methanol to dissolve the lipids from Sinopharm Chemical Reagent (Shanghai, China). N-(2 Hydroxyethyl) piperazine-N′-2-ethanesulfonic acid (HEPES), sucrose, glucose, and KOH were purchased from Sigma–Aldrich (St. Louis, MO, USA).
+ Open protocol
+ Expand
4

Chronic Pseudomonas Lung Infection Model

Check if the same lab product or an alternative is used in the 5 most similar protocols
Chronic mouse infections were performed as previously described (Li et al., 2014 (link)). Briefly, stationary phase P. aeruginosa bacteria were entrapped in agarose beads by mixing with heavy mineral oil at 52°C (Sigma, St. Louis, MO) and stirred vigorously for 6 min followed by cooling on ice for 10 min. The bacteria-containing beads were centrifuged (9,000 g for 20 min at 4°C) followed by extensive washing in PBS. The beads were passively filtered through sterile 200-µm-diameter hole nylon mesh and verified for size (70–150 µm diameter) and uniformity by microscope examination. An aliquot of beads was homogenized and plated onto LB agar plates to determine the bacterial CFU. A 50 µl inoculum containing 106 CFU of P. aeruginosa was introduced into the lungs of adult BALB/c mice (7-week old, cohorts of 10) via the trachea non-surgically by using a 21-gauge ball-ended needle. Successful delivery of the beads to the lungs was manifested by choking reaction of the challenged mice immediately after instillation followed by rapid breathing. Mouse lungs were homogenized for bacterial burden at designated times.
+ Open protocol
+ Expand
5

Microfluidic Acoustofluidic Droplet Generation

Check if the same lab product or an alternative is used in the 5 most similar protocols
The microfluidic channels were etched on a 500 µm thin silicon wafer using deep reactive ion etching according to a standard protocol38 (link). Both the droplet generator channels and the acoustic focusing channel were 380 µm by 100 µm (width × height). The width was set to correspond to half wavelength lateral resonance at approximately 2 MHz in the channel. The inlet and outlet holes were manually drilled through the silicon wafer. The microfluidic channels were sealed by anodic bonding of a 700 µm thin Borofloat-33 glass wafer and the silicon-glass wafer was diced into individual chips. A piezoelectric transducer having a fundamental resonance at 2 MHz (1 mm thickness, APC-840, Americanpiezo) was glued on the silicon side of the chip using cyanoacrylate glue (Loctite 420, Henkel). As fluid connectors, 1 cm long pieces of silicone tubing (228-0701, VWR) were glued using silicone adhesive (Elastosil A07, Wacker). Prior to the experiments the channels were flushed with Repel-Silane (2% solution of dimethyldichlorosilane dissolved in octamethylcyclotetrasiloxane, Pharmacia Biotech) to make the channels hydrophobic followed by rinsing the channels with heavy mineral oil (Sigma Aldrich) to remove unbound Repel-Silane.
+ Open protocol
+ Expand
6

Targeted Bee Brain Injection Protocol

Check if the same lab product or an alternative is used in the 5 most similar protocols
We used two different injection protocols. The first protocol was based on similar injection studies with cockroaches [34 (link)] and crickets [36 (link)], and requires the removal of parts of the head capsule cuticle. In the second, newly developed protocol, we punctured a small opening in the head cuticle without removing it. In both cases, we injected only into the right optic lobe, whereas the left lobe was left intact. Furthermore, in both cases the bees were anesthetized by chilling them down to a temperature of approximately 1°C. The whole procedure was performed under a dissecting microscope equipped with red light illumination (optic fibre system with red light filters; greater than 640 nm, peak at around 680). Care was taken not to expose the bees to white light.
The injections themselves were performed using an electric nanoliter injector (Nanoject II, Drummond, cat. no. 3-000-205) loaded with a glass electrode (Drummond 3.5″, cat. no. 3-00-203-G/X) pulled with a micropipette puller P-97 (Sutter Instruments Co.). The electrode was first filled with heavy mineral oil (Sigma) that is not compressible, enabling a more accurate volume injection and then loaded with approximately 50 µl of injection solution. The micro-injector was directed with a mechanical micromanipulator (Right 3-000-024-R) to the desired position.
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!