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21 protocols using enhanced chemiluminescent reagent

1

Western Blot Analysis of HCC Tissues

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RIPA cell/tissue lysis buffer (Beyotime Institute of Biotechnology), containing a protease inhibitor mixture, was used to lyse the HCC and adjacent tissues. The contents were centrifuged at 13,000 × g for 15 min, and the protein-rich supernatant was collected. Protein concentration was determined using the BCA method (Beyotime Institute of Biotechnology); ~40 µg/lane protein was separated by 10% SDS-PAGE, and then transferred to a polyvinylidene fluoride membrane using the wet transfer method. The membranes were blocked with 5% skimmed milk antigen, at room temperature for 1 h, and then incubated overnight with primary antibodies (Table I) at 4°C. The membranes were washed 3 times with Tris buffered saline/Tween (0.1%) and then incubated at room temperature with secondary antibody (Table I) for 1.5 h. Finally, an enhanced chemiluminescent reagent (Beyotime Institute of Biotechnology) was used to visualize the protein bands, which were quantified using Image Lab v3.1 software (Bio-Rad Laboratories, Inc.).
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2

Quantifying Inflammatory Cytokines in Tissue Samples

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Tissue samples were completely homogenized in 10 times tissue volume protease inhibitors. Subsequently, the homogenates were centrifuged at 12,000 rpm for 10 min and loaded on 10–12% sodium dodecyl sulfate (SDS)-polyacrylamide gels. After being transferred to PVDF Western blot membranes, the proteins were incubated with different primary antibodies, specifically mouse anti- TGF-β1 (Abcam, ab92486, 1:1,000 dilution), rabbit anti- IL-1β (Abcam, ab108499, 1:1,000 dilution), rabbit anti-TNF-α (Abcam, ab6671, 1:1,000 dilution), and mouse anti-IL-6 (Abcam, ab9324, 1:1,000 dilution), overnight at 4°C. The membrane was further incubated with goat anti-mouse IgG H&L (HRP) conjugated secondary antibody (Abcam, ab205719, 1:5,000 dilution) for 1 h at room temperature, and was visualized via enhanced chemiluminescent reagent (Beyotime, Jiangsu, China) on X-ray film.
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3

Protein Isolation and Western Blot Analysis

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The total protein of ovary tissues was isolated by the proteinase inhibitor-containing lysis buffer. The 4% SurePAGE gel (GenScript, Nanjing, China) was used to separate the equivalent amounts of protein. The separated proteins were placed onto a PVDF membrane (Pall, Mexico) after electrophoresis, and then blocked with sealing solution (Tiangen, Beijing, China). The blocked membrane was incubated overnight at 4°C with anti-JAK3 (1:500; Santa Cruz, Cambridge, UK), anti-CDK4 (1:1,000), anti-cyclin D2 (1:1,000) (all from Cell Signaling Technology, US), and GAPDH (1:2,000; Proteintech, Chicago, IL, USA). After rinsing 3 times with Tris-buffered saline/Tween, the corresponding HRP-labeled Goat Anti-Rabbit IgG (1:1,000; Beyotime) or HRP-labeled Goat Anti-Mouse IgG (1:1,000; Beyotime) was used to incubate the membranes for 1 h at room temperature. The Enhanced Chemiluminescent Reagent (Beyotime) was used to visualize the protein blots.
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4

Extracting and Analyzing Cellular Proteins

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Total proteins were extracted using Radio Immunoprecipitation Assay (RIPA) buffer (Beyotime, Shanghai, China), and the proteins were loaded onto 12% sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE) and electro-transferred to polyvinylidene fluoride (PVDF) membranes (Bio-Rad). Then, the membranes were placed in skim milk for blockage and probed with the primary antibodies against COMMD8 (K12416; 1:500; bjbalb, Beijing, China), Cyclin D1 (ab16663; 1:200; Abcam, Cambridge, MA. USA), Ki67 (ab16667; 1:1000; Abcam), B cell lymphoma/lewkmia-2 (Bcl-2) (ab185002; 1:1000; Abcam), Bcl-2 associated X Protein (Bax) (ab32503; 1:1000; Abcam), lactate dehydrogenase A (LDHA) (ab125683; 1:1000; Abcam), CD63 (ab134045; 1:1000; Abcam), CD81 (ab109201; 1:1000; Abcam) and β-actin (ab8227; 1:2000; Abcam) at 4°C for overnight. After the probe of the goat-anti-rabbit secondary antibodies on the next day, the protein signals were emerged using the enhanced chemiluminescent reagent (Beyotime) under an imaging system (Bio-Rad).
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5

ADAM10 Protein Expression Analysis

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Western blot analysis was conducted to evaluate the expression of ADAM10 at the protein level. Total protein was extracted using the RIPA lysis buffer (Beyotime) in accordance with the instructions and then examined using a BCA kit (Beyotime). After separation by 10% SDS-PAGE, the proteins were blotted onto PVDF membranes (Bio-Rad, Hercules, CA, USA), followed by the blockage in 5% skim milk. Then, the membranes were incubated with the primary antibodies, including anti-ADAM10 (ab124695, Abcam, Cambridge, MA, USA) and anti-GAPDH (ab9485, Abcam). Subsequently, the membranes were incubated with HRP-labeled goat anti-rabbit antibody (ab205718, Abcam). The protein signals were emerged using the enhanced chemiluminescent reagent (Beyotime), and the ImageJ 1.48u software (NIH, Bethesda, MA, USA) was utilized for protein quantification. This experiment involved three repetitions.
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6

Western Blot Analysis of IL-18 and Stat3 Signaling

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Colon tissue samples were acquired and lyzed with RIPA buffer (Beyotime Institute of Biotechnology). Protein was quantified using a BCA kit (Beyotime Institute of Biotechnology). A total of 100 µg protein per sample was boiled for 5 min prior to separation by 10% SDS-PAGE, and then transferred onto nitrocellulose membranes (Pall Life Sciences, Port Washington, NY, USA). Membranes were blocked with 5% non-fat milk at 37°C for 1 h and incubated with corresponding primary antibodies: IL-18 (cat. no. BS6823; 1:2,000; Bioworld Technology, Inc. St. Louis Park, MN, USA), phosphorylated (p-) signal transducer and activator of transcription (Stat) 3 (cat. no. 9145; 1:1,000; Cell Signaling Technology, Inc., Danvers, MA, USA), total Stat3 (cat. no. 12640; 1:1,000; Cell Signaling Technology, Inc.) and GAPDH (cat. no. AP0063; 1:5,000; Bioworld Technology, Inc.) at 4°C overnight. Following 3 washes for 10 min in TBST, the membranes were incubated with anti-mouse or anti-rabbit horseradish peroxidase-conjugated secondary antibodies (1:5,000; Santa Cruz Biotechnology, Inc.) at 37°C for 1 h. Enhanced chemiluminescent reagent (Beyotime Institute of Biotechnology) was used to develop the blots and protein was analyzed using Image Lab 3.0 (Bio-Rad Laboratories, Inc., Hercules, CA, USA).
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7

Western Blot Analysis of Autophagy and Apoptosis

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The western blot analysis was performed in line with a previous study described [25 (link)]. In brief, total proteins were separated and transferred into polyvinylidene fluoride (PVDF) membranes (Bio-Rad). After the block, the membranes were incubated with the primary antibodies and the secondary antibodies. Finally, the seeking proteins were visualized using the enhanced chemiluminescent reagent (Beyotime) through an imaging system (Bio-Rad). The antibodies used were listed as follows: anti-Beclin 1 (1:1,000; cat. no. ab210498; Abcam, Cambridge, MA, USA), anti-light chain3 (LC3) (1:2,000; cat. no. ab192890), anti-PDK4 (1:1,000; cat. no. ab89295), anti-Cleaved Caspase 3 (C-caspase 3) (1:1,000; cat. no. ab2302), anti- proliferating cell nuclear antigen (PCNA) (1:1,000; cat. no. ab92552), anti-GAPDH (1:1,000; cat. no. ab8245), and the horseradish peroxidase-conjugated secondary antibodies (1:5,000; cat. no. ab205718).
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8

Western Blot Analysis of Colon Tissue Proteins

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The colon tissues of the rats were lysed by radioimmunoprecipitation assay buffer (Beyotime Institute of Biotechnology, Haimen, China), and the concentration of the protein in each sample was determined by bicinchoninic acid kit (Beyotime Institute of Biotechnology). Then electrophoresis was performed, and the proteins on the gel were transferred onto polyvinylidene fluoride membranes (MilliporeSigma, Burlington, MA, USA). Next, the membranes were blocked by 5% nonfat milk and incubated with the primary antibodies (anti-c-kit cat. ab32363, 1:1,000, anti-PAR-2 cat.ab138479, 1:1,000 and anti-GAPDH cat.ab9485, 1:2,000, all purchased from Abcam plc, Cambridge, UK) overnight at 4°C. On day 2, the membranes were washed and incubated with horseradish peroxidase conjugated secondary antibodies (cat.ab6721, 1:5,000, purchased from Abcam plc) at room temperature for 45 minutes. Finally, the membranes were washed again and incubated with the enhanced chemiluminescent reagent (Beyotime Institute of Biotechnology). The signals were detected using Tanon 6100 Chemiluminescent Imaging System (Tanon Science & Technology Co., Ltd., Shanghai, China).
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9

Quantification of KLLN Protein in Rat Hippocampal Neurons

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Total protein was extracted from rat hippocampal neurons using radioimmunoprecipitation assay buffer (Beyotime Institute of Biotechnology, Shanghai, China). Total protein was quantified using a bicinchoninic acid assay (Beyotime Institute of Biotechnology) and 30 µg protein/lane was separated via SDS-PAGE on a 8% gel. The separated proteins were transferred onto polyvinylidene fluoride membranes and blocked for 1 h at room temperature with 5% non-fat milk. The membranes were incubated with primary antibodies against KLLN (1:1,000; cat. no. ab197892) and GAPDH (1:2,000; cat. no. ab9485; both Abcam, Cambridge, MA, USA) overnight at 4°C. Following primary incubation, membranes were incubated at room temperature for 45 min with horseradish peroxidase-conjugated secondary antibody (1:2,000; cat. no. ab6721; Abcam). Protein bands were visualized using the enhanced chemiluminescent reagent (Beyotime Institute of Biotechnology) on a ChemiDoc XRS+ imaging system (Bio-Rad Laboratories, Inc., Hercules, CA, USA). Protein bands were quantified using ImageJ software (version 1.8, National Institutes of Health) with GAPDH as a loading control.
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10

Western Blot Analysis of Protein Signaling

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Protein was extracted from treated cells including Eca109 and KY-SE150 using RIPA buffer (Beijing Solarbio Science & Technology Co., Ltd.) with protease inhibitor (PMSF; Abcam) and quantified using a bicinchoninic acid protein assay kit (Thermo Fisher Scientific, Inc.). Equal amounts of protein (20 µg) were separated using 12% SDS-PAGE, and then transferred onto PVDF membranes. Subsequently, the membranes were incubated in 5% skimmed milk for 1 h at room temperature and then incubated with primary antibodies (Abcam), including SPATS2 (cat. no. ab122495; 1:500), cyclin E (cat. no. ab33911; 1:1,000), P53 (cat. no. ab32389; 1:1,000), matrix metalloproteinase (MMP-9; cat. no. ab73734; 1 µg/ml), N-cadherin (cat. no. ab202030; 1:500), and GAPDH (cat. no. ab181602; 1:10,000) at 4˚C overnight. After washing the membranes with TBS-Tween-20 (0.1%) three times, they were incubated with secondary antibody goat anti-rabbit IgG H&L (cat. no. ab205718; 1:2,000; Abcam) at room temperature for 1 h. After washing the membranes three times with TBS-T, the signals were detected using enhanced chemiluminescent reagent (Beyotime Institute of Biotechnology) and densitometry was estimated using Quantity One software (v4.6.6; Bio-Rad Laboratories, Inc.). GAPDH was used as a normalization control.
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