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51 protocols using hsp60

1

Western Blot Analysis of Stress Proteins

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As described in our previous study[8 (link)], the whole cell lysate protein was mixed with SDS-PAGE sample buffer and boiled for five minutes. Prepared protein samples were separated by SDS-PAGE electrophoresis and electrotransferred onto polyvinylidene fluoride membranes. After blocking, the membranes were blotted with primary antibodies against PDX1, HSP27, HSP60, and HSP70 (Santa Cruz Biotechnology). The membranes were then incubated with horseradish peroxidase (HRP)-conjugated secondary antibodies and visualized using an enhanced chemiluminescence system (Amersham, Piscataway, NJ, United States).
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2

Curcumin and Cisplatin Synergistic Pathway

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Curcumin, cisplatin, IL6, and all other chemicals were purchased from Sigma Aldrich (St. Louis, MO, USA). Phospho-STAT3, STAT3, phospho-JAK2, JAK2, phospho-H2AX, phospho-CXCR4, Caspase-9, Cleaved Caspase-9, Cleaved caspase-8, Caspase-3, Cleaved Caspase-3, PARP, XIAP, cIAP1, cIAP2, Bcl-xL, Bax, p27, p21, Survivin, c-Myc, Nanog, Aldh, Gapdh, etc., were purchased from Cell Signaling Technologies (3 Trask Lane, Danvers, MA, USA). SOX2, Hsp60, and Bcl2 antibodies were procured from Santa Cruz Biotechnology (Finnell Street Dallas, TX, USA). Annexin V-FITC, propidium iodide staining solution, Hoechst 33342 Solution, BD Cytofix/Cytoperm plus fixation, and apermeabilization solution kit (a BD MitoScreen (JC-1) Kit) were purchased from BD Biosciences (Qume Drive, San Jose, CA, USA).
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3

OXPHOS Protein Detection Protocol

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Cells were washed with 1mL cold 1x PBS and scraped in 40µL
bio-plex cell lysis buffer (Biorad), and processed according to the
manufacturers guidelines. OXPHOS proteins were detected using a cocktail of five
monoclonal antibodies directed against structural components of the different
OXPHOS complexes (MS601, MitoSciences, Eugene, OR), as previously described
(Hoeks et al., 2010 (link)). Furthermore,
VDAC (sc-8828, Santa Cruz Biotech, Heidelberg, Germany), HSP60 (Sc-1052 Santa
Cruz Biotech, Heidelberg, Germany) and HSP90 (610418, BD Biosciences, Breda,
Netherlands) were detected using separate antibodies from different
manufacturers.
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4

Alzheimer's Disease Pathways Exploration

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The following antibodies were used in this study: β-amyloid (20.1) (Santa Cruz Biotechnology); PDGFRβ (Abcam and CST); NG2 (Abcam); LRP1 (Abcam); CD36 (ABclonal); CD31 (CST); GLUT1 (Abcam); CD36 (BD); β-actin (ABclonal); HSP60 (Santa Cruz Biotechnology); Tim23 (ABclonal); LC3B (Sigma–Aldrich); cleaved-caspase 3 (CST); caspase 3 (ABclonal); BAX (ABclonal); BCL2 (ABclonal); GPx4 (Proteintech); xCT (Proteintech); NOX1 (Proteintech); GAPDH (Proteintech); ferritin (Beyotime); and a Mitophagy Antibody Sampler Kit (CST). Aβ1-40 (ChinaPeptides Co., Ltd.), BODZPY 581/591 (Invitrogen), Mito-FerroGreen (Dojindo), LysoTracker Red (Invitrogen), HiLyte Fluor™ 555-Aβ1-40 (Anaspec), FITC-Aβ1-40 (Bachem), and FITC-dextran (Sigma–Aldrich) were also used.
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5

Western Blot Analysis of Cellular Proteins

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Cells were rinsed in PBS and lysed in RIPA (radioimmunoprecipitation assay) lysis buffer (19) containing Complete™ Protease Inhibitor Cocktail (Roche) and PhosSTOP Phosphatase Inhibitor Cocktail (Roche) on ice for 15 minutes, cleared by centrifugation and used directly or frozen on dry ice for later use. 20 μg of lysate was resolved on 8% or 10% SDS polyacrylamide gels, transferred to nitrocellulose membranes (Whatman). Nonspecific binding was blocked using 3% BSA/TBST (TBS with 0.05% Tween-20), and blots were probed overnight at 4°C with primary antibodies. Blots were washed in TBST and antigens were detected using HRP-conjugated secondary antibodies as previously described [1 (link), 59 (link)]. Primary antibodies, diluted 1:1000, were to GSK-3α (Santa Cruz Biotechnology sc-5264), GSK-3β (BD Biosciences 610202), HSP60 (Santa Cruz Biotechnology), GAPDH (Sigma), and to NFkB p65 (D14E12), RelB (C1E4), c-Rel, p105/p50 and p100/p52 (18D10) (all Cell Signaling).
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6

Examining C-PAC Cytotoxic Effects on Het-1A Cells

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Het-1A (150,000) cells were seeded in triplicate 35mm tissue culture treated dishes (Corning; ThermoFisher) and adhered overnight prior to treatment with C-PAC [50 and 75μg/mL] as previously described17 (link) or vehicle control (0.1% ethanol) dissolved in DMEM with 10% fetal bovine serum (Thermo Fisher). Cell lysates were harvested at 0, 24 and 48hr post-treatment using lysis buffer (1% Triton X-100, 50mM HEPES, pH 7.4, 150mM NaCl, 1.5mM MgCl2, 1mM EGTA, 100mM NaF, 10mM sodium pyrophosphate, 1mM sodium orthovanadate, 10% glycerol) with cOmplete™ EDTA-free protease and PhosSTOP phosphatase inhibitors (Sigma-Aldrich) following published protocols18 (link). Immunoblotting was performed using commercially available antibodies from Cell Signaling Technology (Danvers, MA): GAPDH (#2118; 1:40,000) and Santa Cruz Biotechnology: GSTT2 (#514667; 1:500) and HSP60 (#13115; 1:1000). Images were captured via the ChemiDoc Molecular Imager and band quantification with ImageLab analysis software (both Bio-Rad). Expression values normalized to loading controls were determined by chemiluminescent immunodetection with fold-change from vehicle reported.
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7

Western Blotting Analysis of Key Proteins

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Western blotting was used to assess (i) p-eNOS at S1177 normalized to total eNOS, (ii) LC3-II:LC3-I, and (iii) p62, HSP60, m-aconitase, Tom20, and VDAC normalized to glyceraldehyde-3-phosphate dehydrogenase (GAPDH) using standard procedures. Antibodies for p-eNOS S1177, eNOS (1:500; Cell Signaling Technologies, Boston, Massachusetts, USA), LC3, HSP60, VDAC, m-aconitase, Tom20 (1:1000; Santa Cruz Biotechnology Inc., Dallas, Texas, USA), and p62 (1:1000; Abnova, Taipei, Taiwan) were obtained commercially. Densitometry of the immunoblot bands was quantified using Odyssey 3.1 (Li-cor, Lincoln, Nebraska, USA) (Symons et al. 2009 (link); Zhang et al. 2009 (link), 2010 (link), 2012 (link)).
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8

Apoptosis Induction and Analysis

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Methyl β-cyclodextrin (MCD), doxorubicin (DOX), p53 inhibitor pifithrin-α (PFT-α) and methylthioazole-tetrazolium (MTT) and digital vernier caliper were purchased from Sigma-Aldrich (Sigma Aldrich, MO, USA). MCD and DOX were dissolved in water to prepare 100 mM and 1 mM stock respectively and further diluted in culture medium immediately before use. Stock of PFT-α was prepared in DMSO. Antibodies against p53, MDM2, FasR, FasL, Bax, Bcl-2, PARP, Caspase-8, Caspase-7 and Hsp60, mounting medium containing DAPI were purchased from Santa Cruz Biotechnology (Santa Cruz, CA, USA). Collagen-coated chamber slides were purchased from MP Biomedicals, CA, USA.
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9

Protein Detection by Western Blot

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Whole-cell lysates were separated using SDS-PAGE and transferred onto PVDF membranes. The proteins were detected with HSC70 (sc7298), HSP60 (sc-13115), CUL-3 (sc-166110), NFATc1 (sc-7294), Cyclin D1 (sc-8396), and Ub (sc-8017) (Santa Cruz Biotechnology), FLAG (F1804, Merck), and β-actin antibody (G043, ABM). The blots were cropped and the full image of the non-crop blots were presented in Supplementary Figures.
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10

Immunohistochemical Analysis of Pancreas Tissue

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The 4-μm-thick paraffin-embedded pancreas tissue section slides were stained with hematoxylin and eosin. For immunohistochemistry, the primary antibodies for p27Kip1, AGEs (ab23722; Immunogen: AGE-BSA and AGE-human serum albumin (HSA); Cross-reacts with BSA and HSA alone < 1%; Abcam, Cambridge, MA, USA), HSP60, RAGE, and insulin (Santa Cruz Biotechnology, Santa Cruz, CA, USA) were used. In some experiments, commercial human pancreas tissue slides from normal elderly subject (67 years) and elderly diabetic patient (77 years) were purchased from GeneTex (catalog No.: GTX24611 and GTX21813; Irvine, CA, USA) and stored at room temperature for following immunohistochemical analysis.
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