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6 protocols using inova 500 mhz

1

Phytochemical Analysis of Natural Products

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Optical rotations were measured on P2000 polarimeter (JASCO, Tokyo, Japan). UV spectra were obtained on a JASCOP650 spectrometer (JASCO). IR spectra were recorded on a Nicolet 5700 FT-IR microscope instrument (FT-IR microscope transmission, Thermo Electron Corporation, Madison, WI, USA). 1D and 2D NMR spectra were acquired at 500 or 600 MHz for 1H and 125 or 150 MHz for 13C, respectively, on Varian INOVA 500 MHz, or Bruker AVANCE III HD 600 MHz (Bruker Corporation, Karlsruhe, Germany), in acetone-d6 or methanol-d4, with solvent peaks as references. ESI-MS and HR-ESI-MS data were measured using an AccuToFCS JMST100CS spectrometer (Agilent Technologies, Ltd., Santa Clara, CA, USA). Column chromatography (CC) was performed with silica gel (200–300 mesh, Qingdao Marine Chemical Inc., Qingdao, China). HPLC separation was performed on an instrument consisting of a Waters 515 pump and a Waters 2487 dual λ absorbance detector (Waters Corporation, Milford, MA, USA) with a YMC semi-preparative column (250 × 10 mm i.d.) packed with C18 (5 μM). TLC was carried out with glass precoated silica gel GF254 plates (Qingdao Marine Chemical, Inc., Qingdao, China). Spots were visualized under UV light or by spraying with 7% H2SO4 in 95% EtOH followed by heating.
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2

Synthesis and Characterization of Peroxynicotinoid Compounds

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Reagents were purchased from Sigma-Aldrich, Tokyo Chemical Industry (TCI), Fisher Scientific, and VWR and used directly as received. Carbonic anhydrase (CA) from bovine erythrocytes was purchased from Sigma-Aldrich (C2624). Silica gel (SiliaFlash F60, Silicycle, 230–400 mesh) was used for column chromatography. Deuterated solvents were purchased from Cambridge Isotope Laboratories (Tewksbury, Massachusetts, USA). 1H, 19F and 13C{1H} NMR spectra were recorded on Varian INOVA 500 MHz, Bruker 500 MHz, or Bruker 600 MHz NMR instruments at the indicated frequencies. Chemical shifts are reported in ppm relative to residual protic solvent resonances. H2S Detection was monitored by using an H2S electrode (ISO-H2S-2, World Precision Instruments, Inc. Sarasota, Florida, USA) or UV-Vis spectrometer (Cary 60, Agilent Technologies, Santa Clara, California, USA) by following methylene blue assay in PBS buffer. Stability test was performed on HPLC (1260 Infinity II, Agilent Technologies, Santa Clara, California, USA). OA-PeroxyTCM-1, OA-PeroxyTCM-2, OA-PeroxyTCM-3, and OA-TCM-1 were synthesized by following our previous study.69
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3

Characterization of Synthetic Compounds

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Solvents and chemicals were purchased from Merck. ctDNA (Deoxyribonucleic acid sodium salt from calf thymus DNA) were purchased from Sigma.
Melting points are uncorrected and were measured on a Stuart SMP3 apparatus. IR spectra of products were recorded using the ALPHA II Compact FT-IR spectrometer on KBr disks. The NMR (1H and 13C) spectroscopy was performed using a Varian-INOVA 500 MHz and Bruker Ascend-400 MHz spectrometer. The mass spectra of products were recorded on an Agilent Technology (HP 5975C MSD) mass spectrometer operating at an ionization potential of 70 eV.
The UV–Vis absorption spectra were measured using a PerkinElmer apparatus with 1 cm quartz cuvette.
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4

Synthesis and Characterization of Iminosugars

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All chemicals and solvents were
used at the highest degree of purity and without further purification
(Sigma-Aldrich, Alfa Aesar, VWR). Thin-layer chromatography analysis
was carried out to follow the reaction course by using F254 Merck
silica gel plates and subsequent exposure to ultraviolet radiation,
iodine vapor, and spraying with ethanolic p-anisaldehyde
solution. Intermediates and final products were purified by column
chromatography with silica gel (70–230 mesh, Merck Kiesegel
60) and characterized by NMR analysis (NMR spectrometers: Varian Inova
500 MHz and Bruker AVANCE 400 MHz). Matrix-assisted laser desorption/ionization
(MALDI) mass spectrometry (MS) analysis was performed with an AB SCIEX
TOF/TOF 5800 MALDI mass spectrometer working in high-resolution reflectron
mode. Optical rotations were measured at 25 ± 2 °C in the
stated solvent. Iminosugars ent-26 were synthesized as previously reported.39 (link),40 (link) All compounds were herein converted into the corresponding hydrochloride
salt by addition of 1 M HCl (1.0 equiv) followed by evaporation of
volatiles. Absolute quantitative nuclear magnetic resonance (qNMR)
experiments were performed to assess the purity of compounds following
the “general guidelines for quantitative 1D 1H NMR
(qHNMR) experiments”, provided by the Journal of Medicinal
Chemistry
. In all cases, purity was ≥95% (see the Supporting Information for details).
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5

Cobalt-Porphyrin Catalyzed Alkyne Functionalization

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All manipulations were performed under a nitrogen atmosphere using standard Schlenk techniques. All solvents used for catalysis were dried over and distilled from sodium (toluene) or CaH2 (dichloromethane, hexane, ethyl acetate, methanol). All the cobalt-porphyrin catalysts [CoII(P1)], [CoII(P2)] [CoII(P3)], and N tosylhydrazone sodium salts were synthesized according to published procedures.7a (link),8 (link),11 (link) All the alkynes were used as purchased from Aldrich. All other chemicals were purchased from commercial suppliers and used without further purification. NMR spectra (1H and 13C) were measured on a Varian INOVA 500 MHz (125 MHZ for 13C), a Bruker AV400 (100 MHZ for 13C) or a Varian MERCURY 300 MHz (75 MHZ for 13C) spectrometer. Mass spectra of the newly synthesised compounds were recorded in Agilent-5973 GC-MS spectrometer the corresponding HRMS data were recorded on JEOL AccuTOF 4G via direct injection probe. Elemental analysis of the newly synthesized complexes were performed by the Mikroanalytisches Laboratorium Kolbe, Germany. EPR spectra were recorded on a Bruker EMXplus spectrometer.
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6

Air-Sensitive Organometallic Compound Preparation

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All air and moisture sensitive compounds were manipulated in a glovebox under a nitrogen atmosphere. Solvents for air and moisture sensitive reactions were vacuum transferred from sodium benzophenone ketyl (THF, Et2O, pentane, d6-benzene and d8-toluene) or predried by passing through activated alumina columns of a Pure Process Technology solvent purification system. Li(NP)[46 ], Ni(COD)2[50 ], 2,6-xylyl isocyanide[51 (link)] and TaCl5(THF)[52 (link)] were prepared according to literature procedure. Pd(PtBu3)2, [Rh(COD)Cl]2, and [Ir(COD)Cl]2 were purchased from Strem Chemicals and used without further purification. 1H and 31P spectra were recorded on Varian INOVA 500 MHz, Bruker Avance III 400 MHz, or Bruker AVANCE III 500 MHz spectrometers. Complexes 2-8 are quite insoluble, which prevented proper 13C NMR characterization. Chemical shifts are reported with respect to residual protio solvent impurity for 1H (s, 7.16 ppm for C6D5H), a PPh3 standard for 31P (s, −6 ppm in C6D6), and solvent carbons for 13C (p, 67.21 ppm for THF-d8). Attempts at elemental analysis of these air-sensitive complexes were unsuccessful.
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