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Alexa fluor 488 goat anti rabbit antibody

Manufactured by Thermo Fisher Scientific
Sourced in United States, United Kingdom, Germany, Australia, Ireland

Alexa Fluor 488 goat anti-rabbit antibody is a secondary antibody conjugated with the fluorescent dye Alexa Fluor 488. It is designed to bind to rabbit primary antibodies and can be used for various immunodetection techniques, such as immunofluorescence microscopy and flow cytometry.

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98 protocols using alexa fluor 488 goat anti rabbit antibody

1

Immunofluorescence Staining of Adherent Cells

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Cells with a inoculum density of 1 × 105 cells/well were cultured onto coverslips (24-well plate, Fisher Scientific) pre-coated with collagen and fixed with 4% PFA after treatments as described above. The cells were washed with PBS 2 times and incubated with 0.3% Triton X-100 in PBS (PBS/Triton) at room temperature for 10 min. For β-actin staining, the treated cells were incubated with Phalloidin, CF488A (1:100 dilution in PBS, Biotium, Inc., Fremont, CA, USA) at room temperature for 1 h. The cells were then washed three times with PBS and mounted with Vectashield mounting medium with DAPI (Vector Laboratories, Inc., Burlingame, CA, USA). For ZO-1 staining, cells were blocked with 5% goat serum (Jackson ImmunoResearch Laboratories, West Grove, PA, USA) for 1 h and then incubated with an anti-rabbit ZO-1 polyclonal antibody (cat. # 61-7300, 1:100 dilution, Thermal Scientific, Ottawa, Canada) at 4 °C overnight. The cells were then washed three times with PBS and incubated with an Alexa fluor 488 goat anti-rabbit antibody (Thermal Scientific, cat. # A-11034) for 1 h at room temperature. Rinsed cells were mounted with Vectashield mounting medium with DAPI (Vector Laboratories, Inc.). The images were taken by a Zeiss Fluorescence Microscope (Carl Zeiss Ltd., Toronto, ON, Canada) [10 (link)].
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2

Immunofluorescence Staining Protocol

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Cells were cultured onto coverslips, and they were fixed with 4% paraformaldehyde (Pfaffl) after the different treatments, following by the blocking with 5% goat serum for one h at room temperature. And then, cells were incubated with primary antibodies like the anti-rabbit ZO-1 polyclonal antibody (61-7300, 1:100, Thermal Scientific) or Phospho- NF-κB p65 (Ser536) monoclonal antibody (MA5-15160, 1:600, Thermal Scientific) at 4°C overnight. Then, after being washed with PBS three times, cells were incubated with an Alexa Fluor 488 goat anti-rabbit antibody (A32731, 1:1000, Thermal Scientific) for 1 h at room temperature. Cells were rinsed with PBS three times and then were mounted with Vectashield mounting medium with DAPI (Vector Laboratories, Inc.).
For actin staining, fixed cells were rinsed with PBS 3 times, and cells were permeabilized with 0.5% Triton X-100 in PBS at 4°C overnight, following by incubation with Phalloidin, CF488A (94538,1:100, Biotium, Inc., Fremont, USA) at room temperature for 1 h. Rinsed cells were then mounted with Vectashield mounting medium with DAPI, and images were took using a Zeiss fluorescence microscope (Car-Zeiss Ltd., Toronto, ON, Canada).
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3

Immunostaining of Drosophila Eye-Antennal Discs

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Eye-antennal discs from wandering third instar larvae were dissected, and fixed in 4% paraformaldehyde in Phosphate-Buffered Saline (PBS), and stained following the protocol. The primary antibodies used were mouse anti-Chaoptin (MAb24B10) (1:100, DSHB #24B10, Iowa, IA, USA), mouse anti-22C10 (1:100, DSHB #22C10, Iowa, IA, USA) and rabbit anti-GFP (1:1000, ThermoFisher Scientific #A11122, Waltham, MA, USA), while the secondary antibody were Alexa Fluor 568 goat anti-mouse antibody (1:1000, ThermoFisher Scientific #A11031, Waltham, MA, USA) or Alexa Fluor 488 goat anti-rabbit antibody (1:1000, ThermoFisher Scientific # A11008, Waltham, MA, USA).
The brains of three-to-five-day-old mtt-Gal4 > UAS-mCD8::GFP flies were dissected with their retina preserved. At first, the whole flies were fixed in 4% formaldehyde at 25 °C for 2 h. Then, the dissected brains were washed in PBT (PBS containing 0.2% Triton X-100) and blocked in 5% goat serum in PBT (PBST) for 30 min at room temperature. The primary antibodies were used to incubate the samples overnight at 4 °C. Finally, samples were washed three times with PBT and incubated overnight with Alexa Fluor 488-labeled goat anti-rabbit or Alexa Fluor 568-labeled goat anti-mouse secondary antibody overnight at 4 °C. Images of mounted samples were captured under confocal microscope (Leica TCS SP5, Wetzlar, Germany).
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4

Pancreatic Beta Cell Mass Quantification

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The mice were sacrificed by cervical dislocation; the pancreas was immediately resected. The tissue was immediately fixed in 10% formalin at 4°C. For BCM analysis, 10 sets of serial formalin-fixed paraffin-embedded sections (4 mm per section; 100 mm between each set) were stained with rabbit polyclonal anti-insulin antibody (1:100; catalog no. sc-9168; Santa Cruz Biotechnology, Santa Cruz, CA, USA) as primary antibody; Alexa Fluor 488 goat anti-rabbit antibody (1:200; catalog no. A-11008; Thermo Fisher Scientific, Waltham, MA, USA) was used as a secondary antibody, as previously reported (18 (link), 20 (link)). Adjacent sections were also stained with hematoxylin and eosin. The pancreatic sections were analyzed using a fluorescence microscope (BZ-X700; Keyence, Osaka, Japan). BCM was calculated from histological sections using the following formula: (insulin-positive area/whole pancreas area) × pancreas weight (mg) (18 (link)–20 (link)).
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5

Immunofluorescence Analysis of Oocyte Markers

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Oocytes were fixed in 4% paraformaldehyde in PBS for 30 min at room temperature, and permeabilized with 0.5% Triton X-100 for 20 min, then blocked with 1% BSA in PBS for 1 h at room temperature. The oocytes were incubated with primary antibodies at 4 °C overnight. (rabbit polyclonal anti-γH2AX, 1:100, abcam; rabbit polyclonal anti-GRP78, 1:100, abcam), and then the oocytes were extensively washed with wash buffer (0.1% Tween 20 in PBS), probed with Alexa Fluor® 488 goat anti-rabbit antibody (1:200, Thermo Fisher Scientific, Cat #A-11008) or Alexa Fluor 594 goat anti-rabbit antibody (1:200, Thermo Fisher Scientific, Cat #A-11012) in a dark room for 1 h at room temperature. Then oocytes were counterstained with DAPI (10 μg/mL) at room temperature for 10 min. Finally, samples were mounted on glass slides and observed viewed under the confocal microscope (Nikon A1R-si).
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6

Immunofluorescent Analysis of Nasal Polyps

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Nasal polyp specimens were processed for histology as previously described34 (link). Sections were blocked with PBS containing 5% goat serum (Vector Laboratories, Burlingame, Calif) and .5% Triton X-100 (Sigma Aldrich, St Louis, MO) for 1 hour at room temperature (RT), then incubated with either rabbit anti-OSM (N-1, 1:400, Santa Cruz Biotechnology, Dallas, TX), mouse anti-neutrophil elastase (NP57, 1:100, Dako North America, Carpinteria, CA), mouse anti-CD68 (PG-M1, 1:50, Thermofisher), mouse anti-ECP (EG2, 1:1000, Diagnostics Development, Uppsala, Sweden), mouse anti-tryptase (AA1, 1:10000, Thermofisher), mouse anti-CD3 (SP7, 1:1, Thermofisher) mouse anti-CD20 (L26, 1:250, Thermofisher) or rat anti-GM-CSF (BVD2-21C11, 1:100, Abcam, Cambridge, MA) for 1 hour at RT. The sections were then incubated with secondary antibody for 1 hour at RT with Alexa Fluor 488 goat anti-rabbit antibody, Alexa Fluor goat anti-mouse 568, Alexa Fluor goat anti-rat 568, Alexa Fluor goat anti rabbit 647, or Alexa Fluor goat anti-mouse 647(Thermofisher). Slides were mounted with slowfade gold antifade reagent with DAPI counter stain (Thermofisher). To control for background staining, additional slides were stained with the secondary antibody only. Imaging was performed using a Nikon A1R confocal microscope using the 20× objective. Images were processed using ImageJ software.
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7

SARS-CoV-2 Nucleocapsid Protein Immunofluorescence

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Cells were fixed with 10% neutral-buffered formalin solution at the designated time points. Viral antigen expression was detected with an in-house polyclonal rabbit antiserum against the nucleocapsid protein of SARS-CoV but also cross-react with that of the SARS-CoV-2.20 The Alexa Fluor 488 goat anti-rabbit antibody was obtained from ThermoFisher Scientific. Nuclei were stained with Prolong antifade mountant with DAPI (ThermoFisher Scientific). Images were obtained with Olympus BX53 fluorescence microscope. Relative fluorescence units of the fluorescence images were quantified with ImageJ.
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8

Quantifying Pancreatic β-Cell Mass

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Pancreatic tissues were fixed in 10% formalin at 4°C. For β‐cell mass (BCM) analysis, 10 sets of serial formalin‐fixed paraffin‐embedded sections (4 μm per section; 100 μm between each set) were stained with an anti‐insulin antibody. The primary antibody was a rabbit polyclonal antibody (1:100, sc‐9168; Santa Cruz Biotechnology, Santa Cruz, CA, USA). The secondary antibody was Alexa Fluor 488 goat anti‐rabbit antibody (1:200, A‐11008; Thermo Fisher Scientific, Waltham, MA, USA). The tissue sections were then stained with hematoxylin–eosin. The prepared slides were analyzed using a fluorescence microscope (BZ‐X710; Keyence, Osaka, Japan). BCM was calculated from histological sections according to the following formula: (insulin‐positive area/whole pancreas area) × pancreas weight (mg), as previously reported17, 18.
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9

Fluorescent Imaging of Macrophage Autophagy and Secretion

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BMMs (1 × 105) were seeded in eight-well chamber slides (Thermo Fisher Scientific). After the treatment with different stimuli, cells were fixed with 4% paraformaldehyde and then permeabilized with 0.5% Triton X-100 for 15 min, followed by blocking with 1% bovine serum albumin and 0.1% Triton X-100 in phosphate-buffered saline (PBS) at 37 °C for 1 h. The samples were incubated with anti-ASC antibody (AL177, Adipogen), anti-ALIX antibody (634501, Biolegend), anti-CHMP4B antibody (13683-1-AP, Proteintech), and anti-LAMP1 antibody (1D4B, Developmental Studies Hybridoma Bank) in the blocking buffer overnight at 4 °C, followed by the incubation with Alexa Fluor 647 goat anti-rabbit antibody (A-21244, Thermo Fisher Scientific), Alexa Fluor 488 goat anti-rabbit antibody (A-11008, Thermo Fisher Scientific), or Alexa Fluor 568 goat anti-rat antibody (A-11077, Thermo Fisher Scientific) for 2 h at room temperature. Nuclei were stained with DAPI (H-1200, Vector Laboratories). To evaluate LAP formation, BMMs, generated from GFP-LC3 transgenic mice, were incubated with zymosan at a ratio of 8:1 (particle/cell), then GFP-LC3 puncta were detected. Images were acquired using a laser scanning confocal fluorescence microscope with a 60× objective (Olympus Fluoview FV3000).
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10

Peptide Synthesis and Cell Evaluation

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All fluorenylmethyloxycarbonyl (Fmoc) amino acids and Rink amide resin (200–400 mesh) were purchased from NovaBiochem (NSW, Australia). Peptide grade N, N-dimethylformamide (DMF) was from Merck (NSW, Australia). Trifluoroacetic acid (TFA), O-benzotriazole-N,N,N',N'-tetramethyl-uronium-hexafluoro-phosphate (HBTU), N, N-diisopropylethylamine (DIPEA), dichloromethane (DCM), triisopropylsilane (TIPS) and piperidine, 3-(4,5-dimethylthiazoll-2-yl)-2,5-diphenyltetrazolium bromide (MTT), dimethyl sulfoxide (DMSO) and gelatin were obtained from Sigma-Aldrich (Castle Hill, NSW, Australia). D-biotin was purchased from Shen Zhen Inno Syn Biotech Co., Ltd (Shenzhen, China). Cy3-avidin was from Invitrogen life technologies (Victoria, Australia). Dulbecco’s modified Eagle’s medium (DMEM), penicillin/streptomycin solution, trypsin, and foetal bovine serum (FBS) were purchased from Invitrogen (Life Technologies, Mulgrave, VIC, Australia). Mounting medium with 4',6-diamidino-2-phenylindole (DAPI) was purchased from Vector Laboratories (Burlington, Canada). Rabbit anti-caveolin-1 polyclonal antibody was from BD Biosciences (NSW, Australia) and Alexa fluor® 488 goat anti-rabbit antibody from Thermofisher Scientific (VIC, Autralia).
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