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Total protein extraction kit

Manufactured by BestBio
Sourced in China

The Total Protein Extraction Kit is a laboratory tool designed to isolate and extract total proteins from various biological samples. The kit provides the necessary reagents and protocols to efficiently obtain a comprehensive collection of proteins from cells, tissues, or other biological sources.

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37 protocols using total protein extraction kit

1

Western Blot Analysis of YY1 and GAPDH Proteins

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Proteins from tissue and cell lines were extracted using a total protein extraction kit (BestBio). The protein concentration was determined using Micro BCA Protein Assay Kit (Thermo Fisher Scientific) and after incubation for 1 hour, the protein concentration of samples and standards was determined at a wavelength of 562 nm using a microplate reader. All proteins were standardized to a concentration of 3 μg/μL and denatured at 99°C for 5 minutes. Total proteins were separated using TGX Stain‐Free FastCast Acrylamide Kit (BioRad) and transferred to the polyvinylidene difluoride membranes (PVDF, 16 20 177, BioRad). Subsequently, the membranes were blocked with 5% Bovine Serum Albumin (BSA) for 3 hours and incubated with primary antibody YY1 (1:12 000, Abcam) and glyceraldehyde‐3‐phosphate dehydrogenase (GAPDH, 1:5000, ZenBio) overnight at 4°C. The membranes were washed three times with TBST and then incubated with horseradish peroxidase (HRP)‐conjugated secondary antibody goat anti‐rabbit (1:10 000, HuaBio) and goat anti‐mouse (1:2000, HuaBio) for 1 hour at room temperature. Lastly, Immobilon Western Chemiluminescent HRP Substrate (Millipore) was used to detect the chemiluminescence intensity via the ChemiDoc MP Imaging System (BioRad).
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2

Western Blot Quantification of NADPH Oxidase

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Kidney protein was extracted using total protein extraction kit (BestBio, China). The concentration of protein extract was determined using standard BCA method (Beyotime, China). Proteins were loaded onto 5–8% gradient SDS-PAGE gels (CWBIO, China) for electrophoresis and transferred to PVDF membranes (0.45 μm, Millipore, US). And then the membranes were treated overnight at 4°C with the primary antibody against NADPH oxidase (ab133303, 1:2,000, Abcam, US). Next, membranes were washed and treated with secondary antibodies linked to horseradish peroxidase (A0208, 1:1,000, Beyotime Biotechnology, China). Subsequently, enhanced chemiluminescence compounds were used to create signals (EMD Millipore, US).
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3

Quantitative Proteomic Analysis of Tumor Progression

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Nine nude hepatocellular carcinoma patient-derived tumor-bearing mice were randomly separated into 3 groups, resulting in 3 mice for each group. The mice were intravenously injected in the tail vein with Comp-NPs (6 mg BODIPY kg−1). After 24 h, the tumor was exposed to irradiation (650 nm, 0.1 W cm−2, 60 J cm−2, 10 min). The tumors were collected and incubated in the absence and the presence of 10 μM PDS, respectively, at 37 °C for 24 h. The cells were then individually harvested, lysed on ice and extracted whole cell proteins by total protein extraction kit (BestBio). The concentration of raw protein extracts was measured by BCA Kit (Beyotime). The extracted proteins were digested and stable isotopic labeled. The labeled peptide mixtures were pre-fractionated by HPLC (Agilent Technologies 1260 infinity) with Agilent ZORBAX 300 Extend-C18 column. Mass spectrometric quantification was performed on an Orbitrap Fusion Lumos mass spectrometer coupled with an EASY-nLC 1200 nanoUPLC system equipped with an Acclaim™ PepMap™ 100 pre-column (20 mm × 75 μm, 3 μm) and an Acclaim™ PepMap™ RSLC C18 analytical column (150 mm × 75 μm, 2 μm). Raw MS/MS data were searched in Proteome Discoverer (Thermo Scientific, version 2.3) database for peptide and protein identification.
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4

Molecular Profiling of Cardiac Proteins

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According to a previous description, the levels of Bax, B‐cell lymphoma‐2 (Bcl‐2), TLR4, MyD88, p‐p65, and p65 were detected.
44 (link) Total protein was extracted from H9c2 cells and myocardial tissues with the help of Total protein extraction kit (BB‐3101; BestBio), the concentration of which was quantified using the Protein quantitative kit (BCA; DQ111‐01; TransGen Biotech). Afterwards, sodium dodecyl sulfate–polyacrylamide gel (SDS‐PAGE) was prepared by SDS‐PAGE gel preparation kit (BB‐3702; BestBio), and 20 μL of protein samples were electrophoresed. The separated proteins were transferred onto the polyvinylidene fluoride membrane (LC2002; Thermo Fisher Scientific) with Western Transfer Buffer (BB‐35112; BestBio). Subsequently, the membrane was blocked with Western Blocking Buffer (BB‐3512; BestBio) at room temperature for 1 h, and incubated with the primary antibody working dilution at 4°C overnight. Post washing with Western Wash Buffer (P0023C3; Beyotime), the membrane was incubated with secondary antibodies at room temperature for 1 h, rinsed with Western Wash Buffer, and visualized by ECL working solution (32209; Thermo Fisher Scientific). Finally, the Western blot imaging system (FluorChem M; Alpha Innotech) and ImageJ software (Version. 5.0; Bio‐Rad) were used to analyze the results of Western blot. In this test, all information of antibodies was listed in Table 2.
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5

Sarcoptes scabiei Isolation and Extraction

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Twenty New Zealand rabbits were purchased from Chengdu Tatsuo Biological Technology Co. Ltd. (Chengdu, China) and infested with Sarcoptes scabiei for a month. Sarcoptes scabiei was harvested by the Department of Parasitology, College of Veterinary Medicine, Sichuan Agricultural University. In brief, live mites including larvae, nymphs and adults were collected and isolated from severely affected rabbits by exposing the infested crust to 37 °C for 2 h. Partial mites were used for RNA and protein extraction and the remaining mites were used for a challenge test in a vaccination trial. RNA isolation from mites was performed using RNAprep pure Tissue Kit (TIANGEN, Beijing, China) and RNA was transcribed into cDNA using RevertAid First Strand cDNA Synthesis Kit (Thermo Fisher Scientific, Vilnius, Lithuania). Total crude protein was extracted from mites using Total Protein Extraction Kit (BestBio, Shanghai, China). cDNA and total crude protein were stored at -70 °C until assay.
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6

Protein Extraction and Quantification

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At 6, 12, and 24 h postinfection (hpi), the total proteins were extracted from the GCRV-infected and normal control CIK cells with the Total Protein Extraction Kit (BestBio, Shanghai, China), according to the manufacturer's instructions. The quality and quantity of the extracted proteins were evaluated with the Bradford Kit (500–0001, Bio-Rad), according to the manufacturer's instructions. Total proteins (20 μg) from the different samples were boiled with 4× SDS loading buffer and resolved with 12% SDS-PAGE.
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7

Immune Cell Activation and Response Assay

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Dulbecco’s Modified Eagle’s Medium (DMEM), Roswell Park Memorial Institute 1640 (RPMI-1640 medium; GIBCO Co., Ltd, Shanghai, People’s Republic of China); fetal calf serum (Fumeng Biotechnical Co., Ltd, Shanghai, People’s Republic of China); pancreatin (Sagon Inc., Shanghai, People’s Republic of China); TLR4 agonist lipopolysaccharide (LPS; 0111:B4), TLR3 agonist Poly (I:C) (Sigma Inc., St Louis, MO, USA); TLR9 agonist cytosine phosphate guanosine oligodinucleotide (CpG ODN) M362 (InvivoGen Co., Ltd, Shanghai, People’s Republic of China); total protein extraction kit (Bestbio Co., Ltd, Shanghai, People’s Republic of China); human p-NF-κB antibody, human NF-κB antibody, human STAT3 antibody, human p-STAT3 antibody (Cell Signaling Technology, Inc., Beverly, MA, USA); propidium iodide (PI; Solarbio, Beijing, People’s Republic of China); RNA enzyme (Sagon Inc.); Annexin V/PI apoptosis detection (Bestbio Co., Ltd).
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8

Insulin-induced AKT Phosphorylation Assay

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At the first (n = 6 for each group), 2nd (n = 3 for each group), third (n = 3 for each group) and seventh (n = 6 for each group) week after AAV transfection, the GK rats were injected intraperitoneally with insulin after fasting for 12 h. After 30 min of insulin injection, the serum, liver, muscle, adipose, pancreas, kidney and heart tissues were taken separately for protein kinase B (AKT) phosphorylation and protein detection. Total protein was extracted from the liver, muscle, epididymis adipose and heart tissues of GK rats using a total protein extraction kit (BestBio, Shanghai, China), in accordance with the manufacturer’s instructions. The protein concentration was assayed using the BCA Protein Assay kit (BestBio). The Simple Western (Wes‐ProteinSimple, San Jose, CA, USA) system was used to quantify the ApoM (anti‐apoM; Abnova, Taipei, China), phosphorylated AKT (p‐AKT) (anti‐p‐AKT, CST, Danvers, MA, USA), total AKT (anti‐AKT; CST), β‐actin (anti‐β‐actin, CST) and tubulin (anti‐tubulin; Abcam, Cambridge, MA, USA) in the liver, muscle, epididymis adipose and heart tissues of GK rats.
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9

Protein Expression Analysis in SMSCs

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After 72 h of transfection, SMSCs were collected using a Total Protein Extraction Kit (BestBio, Shanghai, China). Protein concentrations were determined using a bicinchoninic acid (BCA) protein assay kit (BestBio). The samples were separated by SDS-PAGE and then transferred to polyvinylidene fluoride (PVDF) membranes (Millipore Corporation, Billerica, MA, United States). Subsequently, the membranes were blocked using a Quickblock solution (Beyotime, Shanghai, China) for 1 h at room temperature. The membranes were incubated with specific primary antibodies, including anti-MyoG (Biorbyt, Cambridge, United Kingdom; diluted 1: 500), and anti-β-tubulin (Zenbio, Chengdu, China, 1: 1000) at 4°C overnight. The next day, PVDF membranes with proteins were incubated with a specific secondary antibody [anti-mouse/rabbit immunoglobulin G (IgG)] (ZenBio, 1:2000). Finally, the enhanced chemiluminescence (ECL) luminous fluid (Beyotime) was used for detection. The relative gray scales of MyoG were detected using the ImageJ software, and three independent replicates were set for each treatment (National Health Institute, Bethesda, MD, United States).
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10

Quantitative Western Blot Analysis

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The total protein was extracted from the CRC cells and epithelial cells by total protein extraction kit (BB-3101; Bestbio, Shanghai, China), and then the proteins were quantified by BCA protein assay kit (Beyotime Biotechnology, Shanghai, China). For Western blotting analysis, an equal quantity of total protein was loaded, and separated by SDS-PAGE. Following electrophoresis, proteins were transferred to a polyvinylidene difluoride membrane and blocked with 5% (w/v) nonfat milk for 1 hour at room temperature. The membrane was incubated with primary antibodies against ACTL8 (1:2,000, ab36030; AbSci), TRIM29 (1:2,000, 35641; Signalway Antibody Co., College Park, MD, USA), or β-actin (1:1,000, 8457; Cell Signaling Technology, Inc., Danvers, MA, USA) at 4°C overnight. The blots were subsequently incubated with a horseradish peroxidase-conjugated secondary antibody (1:10,000, E030120; EarthOx, Millbrae, CA, USA) for 1 hour at room temperature. Proteins were visualized by ECL detection system (Thermo Fisher Scientific, Waltham, MA, USA) according to the manufacturer’s protocol. The target protein band was detected, and the optical density was analyzed using ImageJ2x software (2.1.4.7).
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