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Pebmulti neo vector

Manufactured by Fujifilm
Sourced in Japan

The PEBMulti-Neo vector is a lab equipment product designed for use in various scientific applications. It serves as a functional component for conducting specific experiments and analyses. The core function of this product is to provide a reliable and versatile platform for researchers and scientists to carry out their work. No further details or interpretations are provided, as per the request for a concise, unbiased, and factual description.

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12 protocols using pebmulti neo vector

1

p21 Overexpression in MDA-MB-231 Cells

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MDA‐MB‐231 cells were transfected with pEB Multi‐Neo vector (Fujifilm Wako Pure Chemical), in which genes encoding p21 with IRES2‐ZsGreen (Takara Bio) were inserted, using Lipofectamine 3000 (Invitrogen) and cultured in the presence of G418. A pEB Multi‐Neo vector with ZsGreen gene was used as the control vector.
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2

Expression of Human XPR1 Variants

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The whole coding sequences of human XPR1 (Q9UBH6-1 in Uniprot), ΔSPX-human XPR1, which lacks the N-terminal 1–177 amino acids of the wild-type XPR1, and eGFP (eGFP in Uniprot), were subcloned into the pEBMulti-Neo vector (FUJIFILM Wako), which has a CAG promoter to express downstream sequences.
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3

Recombinant Mouse PTPδ Ig1-Fn1 and Slitrk2 LRR1

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The gene encoding mouse PTPδ Ig1-Fn1 (residues 28–418) was amplified from cDNA (accession No. NM_011211.3) by PCR and cloned into pEBMulti-Neo vector (Wako Pure Chemical Industries) with the N-terminal signal sequence derived from pHLsec vector18 (link) and a C-terminal hexahistidine tag. The gene encoding mouse Slitrk2 LRR1 was cloned into pEBMulti-Neo vector with a C-terminal hexahistidine tag. The proteins were transiently expressed in Freestyle293F cells and purified by Ni-affinity chromatography. Slitrk2 LRR1 was further purified by size-exclusion chromatography with Superdex200 increase (GE healthcare).
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4

Generating Recombinant Mouse LRG Protein

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A549, human alveolar adenocarcinoma cells, were transfected with pEBMulti-neo vector (Wako, Osaka, Japan) to obtain mouse LRG-expressing cells. Cells were cultured for 72 h in serum-free RPMI medium (Wako). LRG protein secreted into culture supernatant was purified with an antibody affinity column (NHS-activated Sepharose 4 Fast Flow conjugated with anti mLRG antibody mLRA0010) and concentrated by ultrafiltration (Amicon Ultra 10 K, Merk Millipore). Concentration of LRG was determined by mouse LRG ELISA as described subsequently.
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5

HA-tagged PDK2 overexpression in HMECs

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pEB Multi-Neo vector (Wako), in which genes encoding PDK2 with a C terminus HA tag and IRES-DsRed-express2 (Clontech) were inserted, was transfected into HMECs using Lipofectamine 2000. The pool of transfected cells was passaged once before a double sorting of DsRed-expressing cells via fluorescence activated cell sorting. The sorted cells were passaged once before proceeding to the WST-1 proliferation assay. A pEB Multi-Neo vector with IRES-DsRed-express2 was used as the negative control vector.
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6

Establishing IL-32 Overexpression Cell Lines

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The method used to establish cells in which IL-32 is continuously highly expressed is mentioned below. Using the first-strand cDNA derived from MIA PaCa-2 cells with low invasive potential as a template, human IL-32 cDNA was amplified by PCR with primers 5′-ggggtaccGCCATGTGCTTCCCGAAGGTC CTCTCTG-3′ (the KpnI site is underlined) and 5′-gggcggccgc TCATTTTGAGGATTGGGGTTCAGAG-3′ (the NotI site is underlined) and subcloned into pLITMUS 28 plasmid vector (New England Biolabs). After confirmation of the cDNA sequence using an ABI3500 Genetic Analyzer (Thermo Fischer Scientific, Inc.), the KpnI- and NotI-digested IL-32β and IL-32ε cDNA fragments were cloned between the KpnI and NotI sites of the pEBMulti-Neo vector (FUJIFILM Wako Pure Chemical Corporation), to yield the plasmids pEB-IL-32β and pEB-IL-32ε. Then, the pEB-IL32β, pEB-IL32ε and control pEB Multi-Neo plasmids were transfected into P cells with Lipofectamine 3000 reagent (Thermo Fischer Scientific, Inc.), according to the manufacturer's protocol. After 48 h, the transfected P cells were selected with G418 (500 µg/ml) for 2 weeks, yielding IL-32β-overexpressing (β), IL-32ε-overexpressing (ε) and control cells with the unmodified plasmid (MOCK).
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7

Recombinant ALKBH4 Expression and Mutagenesis

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PCR-amplified wild-type ALKBH4 was cloned into pEB Multi-Neo vector (Wako). The primer sequences used for the gene amplification were as follows: forward primer, 5′-GAATTCGCGGAAATGGCTGGGAGGGG-3′ and reverse primer, 5′-GGGACATAGTAGATTACAGGTGG-3′. Inserted ALKBH4 sequence was confirmed via sequencing. Catalytic domain-mutated ALKBH4 (H169A/D171A) was purchased from GenScript (Piscataway, NJ, USA).
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8

Engineered Photosensitive Adenylyl Cyclases in HEK293 Cells

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PAC genes with Rudolph-RFP and 2A-peptides at the N-terminus (RFP-2A-PACs) were cloned into pEBMulti-Hyg vectors (Fujifilm Wako Pure Chemical Corporation, Osaka, Japan) for expression in HEK293 cells. The GloSensor-22F cAMP gene (Promega Corporation, Fitchburg, WI, USA), a luciferase-based cAMP reporter, was cloned into a pEBMulti-Neo vector (Fujifilm Wako Pure Chemical Corporation, Osaka, Japan) for monitoring the cAMP level in HEK293 cells. PAC genes with a histidine-tag at the N-terminal were cloned into pQE-30 vectors for protein purification from Escherichia coli. Each gene was codon-optimized for HEK cells or E. coli. C-terminal deletion mutants of OaPAC and mutants with 15 OaPAC C-terminal residues fused to the C-terminus of bPAC were generated using an In-Fusion HD Cloning kit (TaKaRa, Shiga, Japan).
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9

Stable Expression of UBIAD1 in MG63 Cells

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A pEBMulti-neo vector (Wako) was used for the stable expression of UBIAD1 or its mutant variants in MG63 cells. The PCR templates used for the construction of stable expression vectors were pIEx/Bac-1-UBIAD1 and pIEx/Bac-1-UBIAD1 point mutants. 1 μL of template (50 ng/mL) was mixed with 25 μL of 2 × PCR buffer for KOD FX (TOYOBO Company Ltd., Osaka, Japan), 10 μL of 2 mM dNTP (dATP, dGTP, dTTP, dCTP) mixed solution, 1 μL of 1 U/μL KOD FX, 1.5 μL SalI (Takara Bio Inc., Otsu, Japan) and Kozak sequence-anchored sense primer (SalI_hUBIAD1_atg: AAAGTCGACCATGGCGGCCTCTCAGGTCCTG), 1.5 μL NotI-anchored antisense primer (NotI_hUBIAD1_taa: AAGCGGCCGCTTAAATTTTGGGCAGACTGCC) and 10 μL sterilized ultra-pure water. PCR amplification was performed using the T100 thermal cycler system (BioRad). After digestion with SalI and NotI, the insert DNA fragment and pEBMulti-neo vector were obtained by electrophoresis (Cosmo Bio Company Ltd., Tokyo, Japan). The ligation reaction was performed with 4 μL insert DNA fragment and 2 μL pEBMulti-neo vector using Ligation High ver.2 (TOYOBO) to generate pEBMulti-UBIAD1 and pEBMulti-UBIAD1 point mutants.
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10

Constructing a Luciferase Reporter Plasmid

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The thymidine kinase (TK) promoter was obtained from a pEBMulti-Neo vector (Fujifilm Wako Pure Chemical Corporation, Osaka, Japan) by NheI and BglII restriction digestion, blunted by T4 DNA polymerase (Takara, Kusatsu, Japan), and inserted into a pGL3-Basic vector (Promega, Madison, WI, USA) at the SmaI site. This construct was named pGL-TK. The DES-K16 sequence in an intron of the Kctd16 gene was amplified by PCR using KOD FX Neo (Toyobo, Osaka, Japan) with genome DNA isolated from the mouse liver and a primer pair listed in Supplemental Table 1. The 341-bp PCR product was inserted into pGL-TK at the blunted BamHI site. All constructs were subjected to the DNA sequencing analysis.
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