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4 protocols using ab81462

1

Nestin Expression in Neural Progenitors

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Cells were cultured on a coated 13 mm glass coverslip (PDL and laminin, as aforementioned) for 48 h in a complete embryonic NeuroCult™ proliferation medium. The cells were washed with PBS, fixed with 4% paraformaldehyde (MERCK #30525-89-4) in PBS for 20 min at room temperature (RT), and subsequently permeabilized with PBS containing 0.5% Triton X-100 for 5 min. Then, the cells were incubated with a blocking solution containing 10% goat serum and 0.2% BSA (Biological Industries Israel Beit Haemek #030-010-1B) in PBS with 0.1% Triton X-100, for 1 h at RT, followed by primary antibody incubation with anti-Nestin (anti-rat 1:250, abcam ab81462) at 4 °C overnight. Next, secondary antibody donkey anti-rat 488 (1:500, abcam ab150153) was incubated for 1 h at RT. Washing with 0.1% Triton X-100 in PBS preceded each step. Finally, coverslips were mounted in Fluoroshield™ Histology Mounting Medium with DAPI (Sigma-Aldrich #F6057). The representative images were taken with a Nikon Eclipse Ti2 wide-field fluorescence microscope (Fig. 1C).
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2

Immunocytochemical Characterization of NSC Cells

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PFA-fixed NSC cells were washed three times with PBS for 5 min. Then, they were incubated with 0.3% Triton X-100 for 10 min and blocked with 5% bovine serum albumin for 1 h at room temperature. Afterwards, cells were incubated with primary antibodies at 4 °C overnight. The primary antibodies were used as follows: anti-GFAP antibody 1:100 (AB5804; Millipore Corporation, Danvers, MA, USA), anti-nestin (1:100, ab81462, Abcam, Cambridge, MA, USA), anti-MAP2 (1:200, MAB3418), and anti-SOX-2 (1:200 sc-365823, Santa Cruz Biotechnology, Santa Cruz, CA, USA). After rinsing the samples with PBS, the samples were then incubated with corresponding secondary antibodies for 1 h at room temperature. Nuclei were stained using 4,6-diamidino-2-phenylindole (DAPI, 1:1000; Life Technologies, Mulgrave, VIC, Australia).
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3

Immunohistochemical Analysis of Organoids

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We immuno-stained 10 µm-thick sections of the sample obtained with a cryostat (Thermofisher, Cryostar nx70). After imaging, samples were fixed in 4% formaldehyde, incubated overnight in 30% sucrose and immersed in pre-warmed embedding solution (7.5% gelatin and 10% sucrose in DI water). Blocks containing multiple organoids were cut out and frozen in − 50 °C isopentane bath. With confocal microscopy (LS980 Zeiss, 40x) we could detect the presence of SOX-2 (ThermoFisher, Invitrogen, eBioscience™, 14-9811-82) and Nestin (Abcam, ab81462) (Fig. 3, Suppl. Fig. S2) within the structures. For TUBB3 (Fig. 3, Suppl. Fig. S2) and N-CAD (Suppl. Fig. S2) staining, samples were embedded and cryosectioned directly in Neg-50TM Frozen Section Medium (Thermo Fisher Scientific, 6502B) and stained with anti-N-Cadherin antibody (ThermoFisher, Invitrogen, PA5-29570) and anti-Tubulin ß 3 antibody (Clone Tuj1, BioLegend, MMS-435P) respectively.
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4

Immunohistochemical Analysis of Brain Cells

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The sample collection procedure was the same as that for brain atrophy volume measurement. Thereafter, cells or brain sections were fixed in 4% PFA for 10 min, permeabilized in 0.3% Triton X-100 for 10 min, and then incubated in 10% bovine serum albumin (BSA) for 1 h at room temperature to block non-specific binding. Finally, they were incubated overnight at 4 °C with primary antibodies against the following as appropriate: GFAP (1:500; MAB3402, Millipore, Billerica, MA), BrdU (1:200; sc-56255, Santa Cruz, CA), Iba-1 (1:200; NB100-1028, Novusbio, Lieeleton), arginase (1:500; sc-271430, Santa Cruz, CA), CD206 (1:500, R&D System, AF2535), nestin (1:500, ab81462, Abcam, Cambridge, MA), and Sox2 (1:500, ab97959, Abcam, Cambridge, MA). For BrdU staining, brain sections were incubated with 2 M hydrochloric acid at 37 °C for 30 min and neutralized with 0.1 M sodium borate (pH 8.5) for 10 min after permeabilization and before blocking. After removing excess primary antibodies, the samples were incubated with fluorescence-tagged secondary antibodies at room temperature for 1 h. Excess secondary antibodies were removed, and the samples were incubated with 4, 6-diamidino-2-phenylindole (DAPI, BIOTIUM-23002, Life Technologies) for 10 min at room temperature. The samples were then imaged using laser scanning confocal microscopy (Leica, Soloms, Germany) 27 (link).
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