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2 protocols using endoglycosidase hf endo hf

1

Monoclonal Antibody Characterization Protocol

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Trizma hydrochloride, Trizma base, ammonium bicarbonate, urea, Tris(2-carboxyethyl) phosphine hydrochloride (TCEP), iodoacetamide (IAM), ethanol, 4-vinylpyridine (4-VP), and glacial acetic acid were purchased from Sigma. Other reagents used in this study included optima liquid chromatography (LC)-MS-grade acetonitrile, water, formic acid (Fisher Scientific), sequencing-grade trypsin (Promega), chymotrypsin (Promega), glycerol-free peptidyl-N-glycosidase F (PNGase F) (New England Biolabs), endoglycosidase Hf (Endo Hf) (New England Biolabs), O-glycosidase (New England Biolabs), neuraminidase (New England Biolabs), and fetuin (New England Biolabs). All reagents and buffers were prepared with deionized water purified with a Millipore Direct-Q3 (Billerica, MA) water purification system.
The 2–4, 4–8, and 2–43 monoclonal antibodies (MAbs) were a kind gift from the laboratory of David D. Ho (Columbia University Vagelos College of Physicians and Surgeons) (25 (link), 80 (link), 81 (link)). The CR3022 MAb was purchased from Abcam (12 (link), 82 (link), 83 (link)).
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2

Glycoprotein Analysis Using Biochemical Techniques

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Trizma© hydrochloride, Trizma© base, ammonium bicarbonate, urea, tris(2-carboxyethyl) phosphine hydrochloride (TCEP), iodoacetamide (IAM), ethanol, 4-vinylpyridine (4-VP), and glacial acetic acid were purchased from Sigma. Other reagents used in this study included optima LC/MS grade acetonitrile, water, formic acid (Fisher Scientific), sequencing grade trypsin (Promega), chymotrypsin (Promega), glycerol-free peptidyl-N-glycosidase F (PNGase F) (New England Biolabs), Endoglycosidase Hf (Endo Hf) (New England Biolabs), O-glycosidase (New England Biolabs), neuraminidase (New England Biolabs) and fetuin (New England Biolabs). All reagents and buffers were prepared with deionized water purified with a Millipore Direct-Q3 (Billerica, MA) water purification system.
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