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3 protocols using biorad wet transfer system

1

Immunoblotting of NCS-1 in Cell Lines

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Cells were lysed as described previously [9 (link)], and immunoblotting was performed using the NuPAGE system (Invitrogen, Carlsbad, CA) and the Biorad wet transfer system (Bio-Rad Laboratories, Hercules, CA) according to the manufacturers’ protocols. For these studies three different human cell lines (SHSY5Y, HEK293, MB231) and C57BL/6 mouse tissues were used. Antibodies used were anti-NCS-1 FL-190, anti-HA (both from Santa Cruz Biotechnology, Santa Cruz, CA), and anti-FLAG (Sigma-Aldrich, USA). Protein expression was quantified by scanning densitometry by UN-SCAN-IT (Silk Scientific, Orem, UT) and normalized to β-actin loading controls. All Western blotting experiments were performed using three independent cultures.
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2

Protein Extraction and Western Blot

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Frozen tissues were thawed in RIPA buffer containing protease inhibitor, phenylmethylsulfonyl fluoride (PMSF), and sodium orthovanadate (Santa Cruz), homogenized with a polytron, and then spun down twice at 13000 rpm, 4 °C to remove cell debris. Protein concentration was quantified using Pierce BCA protein assay kit (ThermoFisher Scientific) according to the manufacturer’s instruction. Western blots were performed using the NuPAGE system (ThermoFisher Scientific) and PVDF membrane with the Biorad wet transfer system (Bio-Rad Laboratories). Approximately 20 μg total protein was loaded into each lane. Information about the antibodies used is included in Supp. Table 1.
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3

Western Blot Analysis of Frozen Samples

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Frozen brain samples were transferred into ice-cold radioimmunoprecipitation assay (RIPA) buffer (Santa Cruz) – containing protease inhibitors, phenylmethylsulfonyl fluoride, and sodium orthovanadate –, homogenized with a polytron, and spun down twice for 20 min at 13000 rpm at 4 °C to remove cell debris. Protein concentration was quantified using a bicinchoninic acid assay (Pierce BCA protein assay kit, Thermo Fisher Scientific) according to the manufacturer’s instruction. Equal amounts of protein (20 μg per lane) were loaded, and electrophoresis was performed in NuPAGE 4 to 12% gradient Bis-Tris polyacrylamide protein gels (Thermo Fisher Scientific). Transfer was performed using PVDF membranes with the Biorad wet transfer system (Bio-Rad Laboratories). Membranes were blocked with 5% milk in PBS with 0.1% Tween-20 (Sigma Aldrich), incubated overnight with primary antibodies (Table S3) at 4°C, washed, and incubated with secondary antibody for 2 h at room temperature. After a final wash, secondary antibodies were visualized using Pierce ECL chemiluminescence reagents (Thermo Fisher Scientific) and the signal was captured with X-ray films (Thomas Scientific).
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