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2 protocols using 8m guanidine hcl

1

Comprehensive Glycoprotein Analysis Workflow

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TRIS, Formic Acid, and Acetonitrile were obtained from Merck KGaA. Hydrochloric Acid 37% was obtained VWR BDH code 20255.290. 8M Guanidine HCl was obtained from ThermoFisher Scientific code 24115. N‐Glycanase was produced from Agilent formerly Prozyme code GKE‐5006D. Trypsin/Lys‐C mixture was produced from Promega Mass Spec Grade code V5071. Ultrafiltration devices Amicon Ultra‐4 10K were produced from by Merck Millipore code UFC801096. Purified water was obtained by a Milli Q System Millipore mod. Advantage A10 produced from Merck Millipore. Maleimide was produced from Merck Sigma code I29585. Acquity BEH UPLC C18 2.1 x 100 mm cod. 186002352 from Waters. Formic Acid cod 100264 from Merck. Acetonitrile cod. 1.00029 from Merck.
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2

Cytokine and Growth Factor Profiling in Amniotic Membrane Conditioned Media

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The presence of the following cytokines and growth factors, known to contribute to cell recruitment, in the int-hAM and dev-hAM CM was tested from three pooled donors: endothelial growth factor (EGF); vascular endothelial growth factor (VEGF); basic fibroblast growth factor (bFGF); platelet-derived growth factor (PDGF)-BB; interleukin (IL)-6; and IL-8.
The presence of IL-6, and IL-8 in the int-hAM and dev-hAM CM was investigated using a multiplex chemiluminescent array (Aushon Biosystems, Billerica, MA). For VEGF and PDGF-BB testing, 250 μL CM was incubated with 250 μL 8 M guanidine HCl (Thermo Fisher Scientific, Waltham, MA) containing protease inhibitor (Roche, Basel, Switzerland) at 4°C overnight with rotation. Samples were centrifuged at 300 g for 10 min at 4°C and then desalted using Zeba Desalting Columns (Thermo Fisher Scientific) as per the manufacturer's instructions. Desalted samples were collected and stored at −80°C until further testing by enzyme-linked immunosorbent assay (ELISA) kits (R&D Systems, Minneapolis, MN) as per the manufacturer's instructions. The guanidine HCl treatment of samples before measurement of VEGF and PDGF-BB was performed to eliminate factors that interfere with VEGF and PDGF-BB detection by ELISA. The presence of EGF and bFGF in the CM was also tested by ELISA as per the manufacturer's instructions (R&D Systems).
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