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5 protocols using shp099

1

Compound 11a-1: Structure-Guided Synthesis

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Compound 11a-1, 6-Hydroxy-3-iodo-1-methyl-2-(3-(2-oxo-2-((4-(thiophen-3-yl)-phenyl)amino)acetamido)phenyl)-1H-indole-5-carboxylic acid was developed and synthesized using a structure-guided and fragment-based library approach14 (link). SHP099 was obtained from Novartis. KX2-391 was obtained from Selleck Chemicals. Calf intestinal alkaline phosphatase was obtained from New England Biolabs. EGF and PDGF-BB were obtained from R&D Systems.
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2

Sourcing and Preparing Experimental Reagents

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erlotinib was obtained from MedChem Express. osimertinib was obtained from SelleckChem Express. SHP099 was provided by Novartis. Doxycycline and 4-OHT were from Sigma Aldrich. Puromycin and hygromycin stock solution were from Invitrogen. Drugs were dissolved in DMSO to yield 10mM stock and store at −20°C.
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3

Preparation of SHP099 and MEK162

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SHP099 and MEK162 were obtained from Novartis (Basel, Switzerland and Cambridge, USA). Compounds were prepared as 10 mM stock solutions in DMSO and stored protected from light at –20 °C.
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4

Oral Administration of Targeted Compounds

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CLR457 and SHP099 were obtained from Novartis (Basel, Switzerland and Cambridge, USA), and Sunitinib from Pfizer Inc (Sutent). Compounds were prepared as 10 mM stock solutions in DMSO and stored protected from light at –20 °C. CLR457 (20 mg/kg), SHP099 (100 mg/kg) and Sunitinib (60 mg/kg) were freshly formulated in methylcellulose / Tween-80 (0.5% / 0.5%) and administered to mice by oral gavage at 5 ml/kg.
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5

LPS-Induced Inflammation and Therapeutic Interventions

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Lipopolysaccharide (LPS) was purchased from Sigma (Cat # L8643) and dissolved in sterile phosphate-buffered saline (PBS) prior to being administered to mice (single dose; 0.8 mg/kg, i.p.). E3330, also called APX3330 was synthesized as described (Jiang et al., 2010 (link); Nyland et al., 2010 (link)). E3330 was dissolved in Cremophor: EtOH (1:1) (Cremophor was purchased from Sigma, Cat # C5135) for stock solution generation and diluted in PBS prior to use for pre-LPS treatment or post-LPS treatment (20 mg/kg, twice a day, i.p. for Figure S6A; 20 mg/kg, one dose per day, daily by gavage for experiments in Figure 6C, 6D, 6E and Figure S6C and S6D). SHP099 (provided by Novartis), was dissolved in 0.5% Methylcellulose (Sigma, Cat# M0262) and 0.1% Tween-80 (Fisher Scientific, Cat #BP338–500) and given to animals by gavage (daily, 50 mg/kg) for all the in vivo treatments. Male and female mice between 3–4 weeks as juvenile mice, or 8–16 weeks of age as adult mice, or 6~8 month of age as aged mice, were used for indicated experiments.
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