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11 protocols using mouse igg1 pe

1

Measuring IL-2R Expression and STAT5 Phosphorylation

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IL-2R consists of three receptors: CD25, CD122, and CD132. To measure the expression of these three receptors in C8166 cells, C8166 cells (1 × 106 cells/mL) in 24-well plates were first harvested and washed twice with 1% BSA/PBS, resuspended with 1 mL of 1% BSA/PBS, and co-incubated for 60 min at 4 °C with 20 μg of FITC anti-CD25 antibody (Cat No.: 11025742, Thermo Fisher, USA), PE anti-CD122 antibody (Cat No.: 46122842, Thermo Fisher, USA), PE anti-CD132 antibody (Cat No.: 12132942, Thermo Fisher, USA) or the corresponding isotype control (Mouse IgG2b-FITC, CatNo.: 11473281; Mouse IgG1-PE, Cat No.: 46471482; Rat IgG2b-PE, Cat No.: 12403182, Thermo Fisher, USA), respectively.
To measure STAT5 phosphorylation, 1 × 106 C8166 cells for each test in 24-well plates were harvested and stimulated for 60 min at 37 °C with 10 ng doses of IL-2. The samples were then fixed and permeabilized with Intracellular Fixation & Permeabilization Buffer Set (Cat No.: 88882400, Thermo Fisher, USA) following the manufacturer's instructions and incubated for 60 min in 4 °C in different doses of PE anti-phospho-STAT5 (Tyr694) antibody (Cat No.: 12901042, Thermo Fisher, USA) and isotype control (Cat No.: 12471482, Thermo Fisher, USA), respectively. Finally, the cells were measured using a flow cytometer (BD FACSCalibur) and analyzed with FlowJo software (Flow Jo LLC, Ashland, OR, USA).
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2

Immunophenotyping of FcγRII and FcαRI

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K562 cells and U937 cells were washed in FACS wash (FW, 2% FBS in PBS) and resuspended in 50 μL of staining or isotype control antibody and incubated at 4°C for 30 min. For FcγRII we stained with anti-CD32-FITC (Cat# 60012.FI, StemCell) and corresponding mouse IgG2b-FITC isotype control (Cat# 11-4732-81, ThermoFisher Scientific). For FcαRI we stained with anti-CD89/-PE (cat# 555686, BD Biosciences) and corresponding mouse IgG1-PE isotype control (cat# 12-4714-42, ThermoFisher Scientific). Cells were washed twice in FW and analyzed by flow cytometry.
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3

Phenotypic Characterization of AT-MSCs

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The cell surface markers on AT-MSCs were assessed using monoclonal antibodies against mouse CD73, CD105, CD29, CD90, CD31, CD11b, CD45, and CD34 (all from eBioscience). The AT-MSCs at passage 3 were detached with 0.25% trypsin/EDTA and resuspended to 5 × 105 cells in PBS. The cells were incubated with the specific or isotype control antibodies (mouse IgG1-FITC and mouse IgG1-PE, eBioscience) in 100 μL of 3% bovine serum albumin (BSA, Sigma) in PBS for 1 hour at 4°C. The cells were then fixed with 1% paraformaldehyde (Sigma) and analyzed using a FACS Calibur flow cytometer (BD Biosciences, San Diego, CA) and Cyflogic software (CyFlo Ltd.).
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4

Multiparameter Flow Cytometry Immunophenotyping

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Monoclonal antibodies against CD4-FITC (RPA-T4), CD11b-APC (ICRF44), CD45RA-APC (5H9), and FoxP3-PE (259D/C7) were purchased from Becton Dickinson (Franklin Lakes, NJ, USA). LAP-PE (clone 27,232) was purchased from R&D Systems (Minneapolis, MN, USA). Mouse IgG1-FITC, mouse IgG1-PE, and mouse IgG1-APC were purchased from eBioscience (San Diego, CA, USA) and were used as isotype-matched negative controls. Human Fc receptor blocker was purchased from Becton Dickinson. Ethidium monoazide bromide was purchased from Molecular Probes, Inc. (Eugene, OR, USA).
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5

Multiparameter Immune Cell Profiling

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CD3-percp-cy5.5 (Catalogue #45-0036-42), CD8-APC (Catalogue #17-0086-42), CD8-FITC (Catalogue #11-0086-42), CD14-APC (Catalogue #17-0149-42), CD56-FITC (Catalogue #4278380), CD16-PerCP-eFluor™710 (Catalogue #46-0168-42), CD11b-PerCP-eFluor™710 (Catalogue #46-0110-80), IFN-γ-PE (Catalogue #12-7319-42), TLR2-FITC (Catalogue #11-9922-41) and Mouse IgG1-PE (Catalogue #12-4714-81) were all bought from eBioscience. HLA-DR-PE (Catalogue #555812), IL-10-APC (Catalogue #554707), CXCR3-APC (Catalogue #550967) and IFN-γ-FITC (Catalogue #561053), Rat IgG2a-APC (Catalogue #554690) and mouse IgG-APC (Catalogue #5065947) were purchased from BD Biosciences. CD16-FITC (Catalogue #302006), HLA-DR-APC (Catalogue #307609), CD3-FITC (Catalogue #317306) and TLR4-APC (Catalogue #312815) were purchased from Biolegend. EP2-PE (Catalogue #10477) and Rabbit IgG-PE (Catalogue D5-1610) were purchased from Cayman Chemical.
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6

Quantifying Immune Markers in HCC and BMDM

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The expression of PD-L1 protein in HCC cells, the expression of CD11b and F4/80 in BMDM were quantified by flow cytometry. The cells were harvested and stained with anti-PD-L1 PE (329706, Biolegend, USA), anti-CD11b (101205,Biolegend, USA), anti-F4/80 (565410, Biosciences, USA), mouse IgG1 PE (isotype control, 12-4714-42, eBioscience, USA) for 40 min at 4°C. Then, the cells were detected by flow cytometry. The data were analyzed by Flowjo Software.
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7

Multiparametric Flow Cytometry of Stem Cell Markers

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Cells were lifted using 1% (w/v) EDTA, centrifuged (800 x g for 2 min) and resuspended in PBS (5×105 cells/ml) containing 0.25 µg of allophycocyanin (APC), phycoerythrin (PE) or FITC directly conjugated antibodies (anti-CD44 APC, anti-CD24 FITC anti-ABCG2 PE and anti-integrin α6 APC (eBioscience, Inc., San Diego, CA, USA), and anti-CD133 PE (Miltenyi Biotec GmbH, Bergisch Gladbach, Germany), or used as unstained controls. Isotype controls (mouse IgG2b PE, Rat IgG2b APC, mouse IgG1 FITC, mouse IgG1 PE; eBioscience, Inc.) were used to account for any non-specific antibody binding to live cells by establishing a gating threshold (limit 0.5%) according to fluorescence intensity and calculated compensation. All antibodies were used at a 1:400 dilution (0.25 µg) and samples were incubated at 4°C for 1 h before harvesting of cells for analysis). The FACSAria II flow cytometer was used to record 50,000 events prior to analysis using FlowJo software. The APC fluorophore was excited at 633 nm and emission recorded in the 620/20 filter channel. Both the FITC and the PE fluorophores were excited at 488 nm and emission recorded in the 530/30 or 585/42 filter channels, respectively. Compensation controls were used to establish values for fluorescent overlap.
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8

Multiparameter Analysis of Intracellular Proteins

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Cells were stained with anti-human TRAP1-RPE (3H4-2H6, Sigma-Aldrich), primary antibody against HSP90β (EPR16621), STIP1 (EPR6605) and the secondary antibody goat anti-rabbit IgG H&L PE preadsorbed (all Abcam). Mouse IgG1-PE (Invitrogen) and PE-rabbit IgG (Abcam) were used as isotype controls. FcR blocking reagent (Miltenyi Biotec) was used to block non-specific binding. For intracellular staining, cells were fixed and permeabilized with Cytofix/Cytoperm (BD Biosciences) and stained with antibodies for intracellular proteins. For surface and intracellular staining, dead cells were excluded from gating with the use of Sytox Blue dead stain and Fixable Viability Dye eFluor 506 (Invitrogen), respectively.
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9

Multicolor Flow Cytometry Staining

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The following were purchased from from BD PharMingen: (i) Purified mouse anti-human monoclonal antibodies (mAbs) against HLA-DR, CD80, CD86, CD40, CD83, CD38, CD34, and CD117; (ii) CD14 phycoerythrin (PE)–conjugated mouse anti-human mAbs against CD4; (iii) fluorescein isothiocyanate (FITC)–conjugated anti-CD4 (RPA-T4, IgG1) and anti-CD8 (RPA-T8, IgG1); (iv) FITC-, PE-conjugated matching isotype IgG1, IgG2a, and IgG2b controls; and (v) purified mouse monoclonal IgG1 (MOPC-21) isotype control. The mAb DF3 (anti–MUC1-N) has been described previously (27 (link)). Anti-human CD4 TC-conjugated, matching isotype control (IgG2a), PE-conjugated anti-human mAbs against IFN-γ (mouse IgG1-B27), and PE-conjugated matching isotype controls (rat IgG1-PE and mouse IgG1-PE) were purchased from Invitrogen. FITC-conjugated goat anti-mouse (IgG1) was purchased from Chemicon International.
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10

Detecting Surface and Intracellular Markers

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To detect surface B7-H4, CD11b or CD133 expression, cells were incubated on ice for 30min with appropriate antibodies or isotype controls (PE-B7-H4, PE-mouse IgG1, APC-CD11b, APC-CD133, APC-mouse IgG1, all from eBioscience, 1:5), washed twice with FACS buffer (PBS containing 0.1% NaN3 and 5% fetal bovine serum), and resuspended in 0.5 ml 1% formalin/PBS. To analyze intracellular B7-H4, cells were pre-treated with Fix and Perm cell permeabilization reagents (Caltag Laboratories) according to the manufacturer's instructions. Assays of immune function, cell proliferation, cell cycle, apoptosis, cytokines and cytotoxicity were done under standard methods as previously described. All analyses were performed on a FACS calibur system (Becton Dickinson Immunocytometry Systems).
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