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5 protocols using rat collagen 1

1

Establishing Mouse and Human Brain Endothelium Barrier

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To establish the brain endothelium barrier model, mouse ECs (b.End5, BECs) (5 × 104 cells/well) were seeded on the top of a PET transwell insert (0.33 cm2, 8 µm pore size, Corning) previously coated with rat collagen-I (50 μg/ml) and fibronectin (20 μg/ml, Invitrogen). For hBLECs, inserts with cells from co-cultures were placed into new wells without pericytes. Cells were grown to confluence in their respective culture media. We considered that endothelial cell barrier integrity in murine monocultures was established when the transendothelial electrical resistance (EVOM2 Epithelial Voltohmmeter, World Precision Instruments) was above 200 Ω × cm2. TEER measurements under NX/NG conditions were evaluated in random transwells from each assay prior to any experimental procedure for b.End5 (550 ± 25.17 Ω × cm2), BECs isolated from Cort+/+ (585.7 ± 22.15 Ω × cm2), Cort+/− (505.5 ± 27.78 Ω × cm2), and Cort−/− (525 ± 25.28 Ω × cm2) mice. Human barrier integrity was also evaluated by measuring the permeability of Lucifer yellow (Pc < 15·10–6 cm/s) as described below and detailed in Additional file 1.
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2

Establishing Mouse and Human Brain Endothelium Barrier

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To establish the brain endothelium barrier model, mouse ECs (b.End5, BECs) (5 × 104 cells/well) were seeded on the top of a PET transwell insert (0.33 cm2, 8 µm pore size, Corning) previously coated with rat collagen-I (50 μg/ml) and fibronectin (20 μg/ml, Invitrogen). For hBLECs, inserts with cells from co-cultures were placed into new wells without pericytes. Cells were grown to confluence in their respective culture media. We considered that endothelial cell barrier integrity in murine monocultures was established when the transendothelial electrical resistance (EVOM2 Epithelial Voltohmmeter, World Precision Instruments) was above 200 Ω × cm2. TEER measurements under NX/NG conditions were evaluated in random transwells from each assay prior to any experimental procedure for b.End5 (550 ± 25.17 Ω × cm2), BECs isolated from Cort+/+ (585.7 ± 22.15 Ω × cm2), Cort+/− (505.5 ± 27.78 Ω × cm2), and Cort−/− (525 ± 25.28 Ω × cm2) mice. Human barrier integrity was also evaluated by measuring the permeability of Lucifer yellow (Pc < 15·10–6 cm/s) as described below and detailed in Additional file 1.
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3

Silk Films Coated with ECM Proteins

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Silk films were coated with rat collagen I (Gibco, Thermo Fisher), fibronectin (BD Biosciences, Bedford, MA, USA), mouse laminin (Invitrogen, Thermo Fisher) or Poly-d-Lysine (Gibco, Thermo Fisher) respectively in a 50 μg/ml concentration diluted in dH2O. We used 200 μl ECM to coat the silk film surfaces and incubated for 2 h at room temperature (RT). Then washed with 1 ml PBS for 3 times. These coated silk films were prepared freshly before seeding cells34 (link)–36 (link).
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4

Affinity Measurement of 4-1BB Receptor Binding

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96 well plates precoated with rat collagen I (Gibco) were blocked overnight with PBSTA (PBS (Corning) + 2% w/v BSA (Sigma Aldrich) + 0.05% v/v Tween-20 (Millipore Sigma)) at 4 °C. After washing with 3 times PBST (PBS (Corning) + 0.05% v/v Tween-20 (Millipore Sigma)) and 3 times with PBS (Corning), ɑ4-1BB and ɑ4-1BB-LAIR were incubated in PBSTA overnight at 4 °C while shaking. Wells were washed 3 times with PBST and 3 times with PBS and then incubated with goat αmIgG1-Horseradish peroxidase (HRP) (1:2000, Abcam) in PBSTA for 1 h at RT while shaking. Wells were again washed 3 times with PBST and 3 times with PBS and then 1-Step Ultra TMB-ELISA Substrate Solution (Thermo Fisher) was added for 5–15 min, followed by 1 M sulfuric acid to quench the reaction. Absorbance at 450 nm (using absorbance at 570 nm as a reference) was measured on an Infinite M200 microplate reader (Tecan). Binding curves were generated with GraphPad Prism software V9. KD values were calculated using a nonlinear regression fit for one site total binding with no non-specificity and curves were normalized to the Bmax values.
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5

3D Culture of Dendritic Cells in Collagen Gels

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Collagen gels were prepared as previously described (Imle et al, 2019 (link)). Briefly, concentrated rat tail collagen I (Corning) was mixed with bicarbonate‐buffered MEM on ice (15 μl 10× MEM, 17 μl 7.5% NaHCO3 (both Gibco), and 120 μl rat collagen I). To culture iDCs in 3D collagen, 2 × 106 cells/ml were mixed 1:1 with collagen, and 100 μl cell‐collagen per‐well mix was transferred in 96‐well F‐bottom plates and let polymerize for 20 min at 37°C. For suspension cultures, 2 × 106 iDCs/ml were mixed at 1:1 ratio with RPMI, and 100 μl per‐well of cell‐media mix was transferred in 96‐well U‐bottom plates. For 2D collagen cultures, 100 μl of collagen mix, polymerized in 96‐well F‐bottom plates, were overlaid with 2 × 106 iDCs/ml supplemented with 20 ng/ml IL‐4 and 20 ng/ml GM‐CSF. 2D suspension and 3D collagen cultures were overlaid with 100 μl RPMI supplemented with 20 ng/ml IL‐4 and 20 ng/ml GM‐CSF per well.
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