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43 protocols using orthovanadate

1

Cannabinoid Signaling Pathway Compound Acquisition

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AA-5HT, 2-AG, AM-251, AM-630, OEA, PEA and URB597 were obtained from Biomol GmbH (Hamburg, Germany). AEA was purchased from Enzo Life Sciences GmbH (Lörrach, Germany). Dimethyl sulfoxide (DMSO), ethylenediaminetetraacetic acid (EDTA), glycerol, glycine, hydrogen peroxide (H2O2), sodium chloride (NaCl), Tris hydrocloride (Tris-HCl) and Tris ultrapure were obtained from AppliChem (Darmstadt, Germany). 4-(2-hydroxyethyl)-1-piperazineethanesulfonic acid (HEPES) was bought from Ferak (Berlin, Germany). Aprotinine, bovine serum albumin, capsazepine, HCl, leupeptine, luminal, orthovanadate, para-coumaric acid, para-formaldehyde, phenylmethylsulfonyl fluoride (PMSF) and Triton® X-100 were from Sigma (Taufkirchen, Germany). Dulbecco's modified eagle medium (DMEM) with 4.5 g/l glucose and with L-glutamine was provided by Lonza (Cologne, Germany). Fetal calf serum (FCS) and penicillin-streptomycin were purchased from Invitrogen (Darmstadt, Germany) and phosphate-buffered saline (PBS) was provided by PAN Biotech (Aidenbach, Germany). Milk powder was obtained from Bio-Rad Laboratories GmbH (Munich, Germany). Acrylamide (Rotiphorese® Gel 30) was obtained from Carl Roth GmbH (Karlsruhe, Germany). Pure standards for LC-MS analysis of AEA, 2-AG, OEA, PEA and AEA-d8 were purchased from Cayman Chemical (Ann Arbor, MI, USA).
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2

Characterization of Pesticide Analogs

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CV and its derivatives and analogs (purity >98% according to HPLC analysis) were provided by the Institute of Pesticide Science, NWAFU. Wilforine was purchased from PureOne Biotechnology (Shanghai, China). The structures of all the 12 compounds are presented below (Figure 5). Tris-ATP, orthovanadate, HEPES, NaHCO3, KCl, CaCl2, and Mes were purchased from Sigma (Shanghai, China). Protease inhibitor cocktail (EDTA-free) was purchased from Roche (Shanghai, China). Bafilomycin A1 was purchased from Santa Cruz Biotechnology (Shanghai, China). Ether was purchased from Xilong Chemical (Shantou, China). The substrate of APN, L-leucine-p-nitroanilide (Leu-pNA), was purchased from J & K Chemical Ltd. (Shanghai, China). Tris, NaCl, HCl, EDTA, MgSO4, and all other chemicals were purchased from Guanghua Sci-Tech (Guangzhou, China).
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3

Western Blot Analysis of Cellular Signaling

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Tissue or cell lysates were prepared by homogenization in a buffer containing: 10 mM HEPES (pH 7.9), 15 mM MgCl, 10 mM KCl, 0.5 mM EDTA, 0.2% Triton X-100, 1 mM benzamidine, 200 mg/ml aprotinin, 200 mg/ml leupeptin, 1 mM PMSF (Sigma-Aldrich) and phosphatase inhibitors: 20 mM b-glycerophosphate, 10 mM NaF, 10 mM sodium pyrophosphate, and 2 mM orthovanadate (Sigma-Aldrich). Tissue lysates were resolved by 8% (m/v) SDSPAGE in reducing conditions and transferred to nitrocellulose membranes. After blocking with 2% BSA, membranes were washed and incubated with an anti-pSMAD3, αSMA or α/β-Tubulin antibodies (Cell Signaling) overnight at 4°C. Proteins were detected with secondary Abs goat anti-mouse A680 (Life Technologies) and goat anti-rabbit IR800 (Thermo scientific) and visualized with an infrared imaging system (Odyssey; LI-COR Biosciences).
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4

Western Blot Analysis of Cellular Proteins

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Cells were collected by centrifugation, washed twice in ice-cold PBS and lysed in ice-cold RIPA buffer (1x PBS, 1% Nonidet P-40, 0.5% sodium deoxycholate, 0.1% SDS, 10 mg/mL PMSF, 40 mg of aprotinin/mL, 100 mM orthovanadate) (all reagents from Sigma-Aldrich). After centrifugation (15000 g, 15 min, 4 °C) to separate cellular debris, the lysates were resolved in a 12% SDS-PAGE, and electrotransferred onto a nitrocellulose paper (Protran; Schleicher and Schuell, Dassel, Germany). Determination of protein levels was carried out by immunoblot analysis using antibodies against p53 (CM5; Leica Biosystems, Barcelona, Spain), p-p53Ser15 (9284; Werfen), p-H2AX Ser139 (07–164, EMD Millipore, Madrid, Spain), p19ARF (ab80; Abcam), p16 (M-156; Santa Cruz Biotechnology, Heidelberg, Germany), pan-Ras-V12 (Ab-1; Sigma-Aldrich) and β-tubulin (T5168; Sigma-Aldrich).
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5

Immunoblotting of AKT and ERK Signaling

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Cell lysates were obtained using modified radioimmunoprecipitation assay (RIPA) buffer supplemented with protease inhibitors (Complete, Boehringer Mannheim, Mannheim, Germany), NaF (50 mM), PMSF (1 mM), aprotinin, leupeptin, pepstatin (1 ng/ml) and orthovanadate (2 mM) (Sigma-Aldrich). The following primary antibodies were used for immunodetection: rabbit anti-total AKT, anti-phospho-AKT (Thr 308) and anti-phospho AKT (Ser 473) and used at 1:1000 dilution (cell signaling), rabbit anti-total Erk1/2 (dilution 1:2000) and rabbit anti-phospho-Erk1/2 (Thr202/Tyr204) (dilution 1:1000) (cell signaling), mouse anti β-actin used at 1:5000 dilution (Sigma-Aldrich) and rabbit anti-vinculin used at 1:30000 dilution (Abcam). Goat anti-rabbit IgG HRP-linked (cell signaling) and goat anti-mouse IgG HRP-conjugate (Bio-Rad) were used as secondary antibodies at 1:2000 dilution.
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6

Comprehensive Cellular Assay Protocol

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Aprotinin, cisplatin (cis-diamminedichloroplatinum(II)), p-coumaric acid, ethanol, N, N-dimethylformamide (DMF), luminol, orthovanadate, and phenylmethylsulfonyl fluoride (PMSF) were obtained from Sigma-Aldrich (Taufkirchen, Germany). Dulbecco’s modified Eagle’s medium (DMEM) with 4 mM L-glutamine and 4.5 mg/ml glucose was obtained from Lonza (Cologne, Germany). Fetal calf serum (FCS) and phosphate-buffered saline (PBS) were purchased from PAN Biotech (Aidenbach, Germany). Leupeptin was purchased from Biomol (Hamburg, Germany). Dimethyl sulfoxide (DMSO), ethylenediaminetetraacetic acid (EDTA), glycerol, hydrogen peroxide (H2O2), sodium chloride (NaCl), Tris hydrochloride (Tris-HCl), and Tris ultrapure were purchased from AppliChem (Darmstadt, Germany). PD98059 was purchased from Tocris Bioscience (Wiesbaden-Nordenstadt, Germany), and penicillin-streptomycin was bought from Invitrogen (Darmstadt, Germany). 4-(2-hydroxyethyl)-1-piperazineethanesulfonic acid (HEPES) was obtained from Ferak (Berlin, Germany), and SB203580 was purchased from Enzo Life Sciences (Lörrach, Germany). Triton® X-100 was bought from Roth (Karlsruhe, Germany).
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7

Antibiotic Susceptibility Testing Protocol

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Tetracycline, oxyTetracycline, chlorTetracycline, doxycycline, ethidium bromide (EB), Hoechst33342 stain, cefoperazone, cefazolin, streptomycin, ampicillin, roxithromycin, chloramphenicol, rifampicin, norfloxacin, deoxycholate, sodium cholate, ofloxacin, doxorubicin, daunorubicin, acridine flavin, and quinine were purchased from Coolaber (Beijing, China), and ortho-vanadate was purchased from Sigma-Aldrich (St. Louis, MO, United States). Carbonylcyanide m-chlorophenylhydrazone (CCCP) and reserpine were obtained from MedChemexpress (Monmouth Junction, NJ, United States). Drug-sensitive paper was purchased from Hangzhou Microbial Preparation (Hangzhou, China).
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8

Synthesis and Characterization of Silver Nanoparticles

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Silver nitrate (99.9%), sodium citrate dehydrate (99%), sodium borohydride (98%), hydrogen peroxide (30%), polyvinylpyrrolidone (PVP), 2-mercaptoethanol (99%), 11-amino-1-undecanethiol hydrochloride (MUNH2, 99%), ofloxacin powder (99%), orthovanadate (≥90%), sodium chloride, sodium phosphate, sodium phosphate monobasic monohydrate, Bacto-Tryptone, and Bacto Yeast Extract were purchased from Sigma-Aldrich. N-Hydroxysulfosuccinimide (Sulfo-NHS, 98.5%, Pierce), 1-ethyl-3-[3-dimethylaminopropyl]-carbodiimide hydrochloride (EDC, 99%, Pierce), silver perchlorate monohydrate (99%, Alfa Aesar), live/dead backlight viability assay (Life Technologies), and Hoechst 33342 (Life Technologies) were purchased as indicated, and used as received. The cell line of Escherichia coli (wt w3110) was purchased from a genetic stock center (CGSC). Deionized (DI) water (18 MΩ water, Barnstead) was used to prepare all the solutions including a standard LB medium (1% tryptone peptone, 0.5% yeast extract, and 0.5% NaCl, pH = 7.2) and a modified LB medium (1% tryptone peptone, 0.5% yeast extract, and 0.1% NaCl, pH = 7.2).
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9

Protein extraction and quantification from adipocytes

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Total protein was extracted from adipocytes and stromal vascular fraction (SVF) isolated from SAT, and in vitro differentiated adipocytes on day 7 and 14 of differentiation. Cells were lysed in ice-cold lysis buffer: 25 mM Tris-HCl (Sigma), pH 7.4; 0.5 mM EGTA (Sigma); 25 mM NaCl (Sigma); 1% Nonidet P-40; 10 mM NaF; 100 nM okadaic acid (Alexis Biochemicals), 1X Complete protease inhibitor cocktail (Roche, Indianapolis, IN, USA) and 1 mM orthovanadate (Sigma). Lysates were vortexed and incubated on ice for 10 minutes and then centrifuged at 15,000 g for 15 minutes at 4°C. The infranatant was transferred into a new tube and saved at −80°C. Protein concentration was determined using a BCA protein assay kit (Pierce, Thermo Scientific). 10 µg proteins were separated by SDS-PAGE (5–8% gradient stain-free gels; BioRad), transferred to nitrocellulose membranes and blocked with 0.05% tween-PBS with 5% BSA. Membranes were incubated overnight with the primary antibody anti-CABLES1 (1:240, HPA073649; Sigma-Aldrich). Membranes were washed with 0.05% tween-PBS and incubated for 1 hour at room temperature with horseradish peroxide-conjugated secondary antibody (anti-rabbit, 1:2000; Cell Signalling). Protein bands and stain-free blot images were detected using enhanced chemiluminescence and the ChemiDocTM MP System (Biorad) and quantified using the Image Lab Software (Version 6.1.0; BioRad).
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10

Western Blot Analysis of Cellular Proteins

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Sodium fluoride and orthovanadate, phenylmethylsulfonyl fluoride, aprotinin and leupeptin were purchased from Sigma (Saint-Louis, MO, USA). Anti-ERK1/2, anti-phospho-ERK1/2 and HRP conjugated anti-rabbit antibodies were from Cell Signaling Technology (Beverly, MA, USA). Anti-Hsp90 antibody was purchased from Santa Cruz Biotechnology (Santa Cruz, CA, USA). Anti-CD19 and anti-CD103 conjugated antibodies were purchased from miltenyi (Bergisch Gladbach, Germany). HRP-conjugated anti-mouse antibody was from Dakopatts (Glostrup, Denmark).
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