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292 protocols using water purification system

1

Targeted and Untargeted Metabolomics of Wild OS

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Wild OS from Baima Snow Mountains were collected in June 2021. The bacterial membrane was first washed with distilled water, and OS was cut from the base of the stroma into two parts, the stroma and sclerotia. The stroma was labeled as OSBSz-x and the sclerotia was labeled as OSBSh-x. Three biological replicates were used for each group.
Instruments for widely targeted metabolomics include ultrahigh-performance liquid chromatograph (Sciex, Framingham, MA, USA), a high-sensitivity mass spectrometer (Sciex, Framingham, MA, USA), and a centrifuge (Thermo Scientific, Waltham, MA, USA), and a water purification system (Merck Millipore, Burlington, MA, USA). Instruments for untargeted metabolomics include ultrahigh-performance liquid chromatography (Waters, Milford, MA, USA), a high-resolution mass spectrometer (Thermo Scientific, Waltham, MA, USA), a low-temperature high-speed centrifuge (Eppendorf, Hamburg, Germany), a vortex (Qilin Bell Instrument Manufacturing Co., Ltd., Haimen, China), a water purification system (Millipore, Burlington, MA, USA), and a refrigerated vacuum concentrator (Gene company limited, Hong Kong, China).
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2

Thin Film Composite Membrane Characterization

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Four commercial thin film composite (TFC) membranes, including two RO (i.e., SW30XLE and BW30 from DuPont FilmTecTM, Wilmington, DE, USA) and two NF membranes (i.e., NF3 from RisingSun Membrane Technology (Beijing) Co., Ltd., China and Duracid from Suez (GE)) were used in this research study. Dibutyl phthalates (DBP) and benzyl butyl phthalates (BBP) with 99% and 98% purity, respectively, were purchased from Sigma-Aldrich, Saint Louis, MI, USA and were used to prepare stock solutions. Sodium sulfate (Na2SO4, Merck Sdn Bhd, Selangor, Malaysia) and sodium chloride (NaCl, Merck Sdn Bhd, Selangor, Malaysia) were used for the salt rejection test, while sulfuric acid (H2SO4, Merck Sdn Bhd, Selangor, Malaysia) and sodium hydroxide (NaOH, Merck Sdn Bhd, Selangor, Malaysia) were used for solution pH adjustment. All the solutions were prepared by using water (ASTM Type III) produced by a water purification system (Merck Millipore, Burlington, MA, USA).
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3

Metabolomics Sample Preparation Protocol

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Acetonitrile (ACN), methanol (MeOH), and ammonium acetate (NH4Oac), all LC–MS grade, were purchased from Fisher Scientific (Pittsburgh, PA). Ammonium hydroxide (NH4OH), O-methylhydroxylamine hydrochloride (MeOX), and N-Methyl-n-(tert-butyldimethylsilyl) trifluoroacetamide (MTBSTFA) were bought from Sigma-Aldrich (Saint Louis, MO). Deionized water was provided in-house by a water purification system from EMD Millipore (Billerica, MA). Phosphate buffered saline (PBS) was bought from GE Healthcare Life Sciences (Logan, UT). Standard compounds corresponding to measured aqueous metabolites/features were purchased from Sigma-Aldrich and Fisher Scientific. Lipid standards were purchased from Fisher Scientific, Sigma-Aldrich, and Avanti Polar Lipids (Alabaster, AL).
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4

Barium Sulfate Powder Dissolution Study

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BaSO4 in powder form with purity of 99.99% on trace metal basis
was used in this work. The chemical was used as received from the
supplier (Sigma-Aldrich) without further purification. The solid was
equilibrated adding ultrapure water (Type 1) with a resistivity of
18.2 MΩ·cm at 25 °C produced in a Water Purification
System (Merck Millipore). The BaSO4 powder used for this
study consisted of particles with a wide size distribution. To prevent
possible influencing factors of particles, the initial powder was
pre-sieved into uniform size and only particles ranging between 53
and 96 μm were used. Figure 1 shows a microscopic image of the particle that was
sieved and used for dissolution. The BaSO4 particle shows
a smooth surface and regular shape. The particle size indicates that
the sieving process was effective in producing particles of consistent
size for the dissolution experiment.
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5

Cryogel Synthesis from Thai Natural Precursors

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MB was supplied by Merck (Darmstadt, Germany). The cryogel was synthesized from natural precursors consisting of rice flour (Erawan Brand, Nakhon Pathom, Thailand), tapioca starch (Jaydee Brand, Nakhon Pathom, Thailand), and limewater prepared from food-grade red lime purchased at a local supermarket in Kathu (Phuket, Thailand). Ethanol (95%, commercial grade) was supplied by High Science Co., Ltd. (Songkhla, Thailand). Ultrapure water from a water purification system (Merck, Darmstadt, Germany) was used for preparing all standard solutions.
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6

Polyphenol Standards Extraction Protocol

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Standard compounds of caffeic acid, ellagic acid, gallic acid, catechin, hyperoside, and isoquercetin were obtained from Fluka (Buchs, Switzerland); procyanidin B1, procyanidin B2, and quercetin 3-O-glucuronide were obtained from Extrasynthèse (Genay, France); protocatechuic acid, and epicatechin were obtained from Sigma (Steinheim Germany). Sanguiin H-6 was originated from the collection of standards of the Department of Pharmacognosy from Medical University in Wrocław (Poland). All used solvents of analytical and HPLC grade were purchased from Merck (Darmstadt, Germany). Demineralized water was prepared by using Merck Millipore Water Purification System (Burlington, MA, USA).
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7

Metabolite Analysis by LC-MS

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LC–MS-grade acetonitrile (ACN), methanol (MeOH), ammonium acetate, and acetic acid were purchased from Fisher Scientific (Pittsburgh, PA, USA). Ammonium hydroxide was bought from Sigma-Aldrich (Saint Louis, MO, USA). DI water was provided in house by a Water Purification System from EMD Millipore (Billerica, MA, USA). PBS was bought from GE Healthcare Life Sciences (Logan, UT, USA). The standard compounds corresponding to the measured metabolites were purchased from Sigma-Aldrich (Saint Louis, MO, USA) and Fisher Scientific (Pittsburgh, PA, USA).
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8

Lipid and Fluorescent Probe Characterization

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Both phospholipids, 1,2-dipalmitoyl-sn-glycero-3-phosphoethanolamine (DPPE) and 1,2-dipalmitoyl-sn-glycero-3-phosphocholine (DPPC), and the fluorescent probe, 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine-N-(Lissamine Rhodamine B Sulfonyl) labeled at the headgroup (DOPE-Rh), were purchased from Avanti Polar Lipids, Inc. The phospholipids were > 99% pure and used without further purification. Phenylalanine (99%) and phosphate buffered saline (PBS) were purchased from Sigma. Solvents used were of HPLC grade from Fisher Scientific. Deionized water with 18.2 MΩ•cm resistivity was produced by a Milli-Q Synthesis water purification system (EMD Millipore, MA).
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9

Metabolite Extraction and Analysis

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Acetonitrile (ACN), methanol (MeOH), ammonium acetate (NH4OAc), and acetic acid (AcOH), all analytical grade, were purchased from Fisher Scientific (Pittsburgh, PA, USA). Ammonium hydroxide (NH4OH) was bought from Sigma-Aldrich (Saint Louis, MO, USA). Deionized water was provided in-house by a Water Purification System from EMD Millipore (Billerica, MA, USA). Phosphate buffered saline (PBS) was bought from GE Healthcare Life Sciences (Logan, UT, USA). Standard compounds corresponding to the measured metabolites were purchased from Sigma-Aldrich (Saint Louis, MO, USA) and Fisher Scientific (Pittsburgh, PA, USA).
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10

Amylose Content Determination in Rice Flour

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Rice flour (Erawan Brand, Nakhon Pathom, Thailand) was locally purchased from a supermarket; its amylose content was analyzed using a spectrophotometer, with reference to Thai agriculture standard TAS 4000-2003 (in-house method TE-PH-021, based on Quality and Testing of Thai Horm Mali Rice, 2004, Department of Agriculture, Bangkok, Thailand), and 23.3% amylose was found. Red lime (RL) and white lime (WL) (no brand, food grade) were also bought from a supermarket in Phuket, Thailand. It is worth noting that WL is calcium hydroxide, which is commonly prepared by adding water to CaO, while RL is the mixture of WL with curcumin. Calcium hydroxide was supplied by ITW Reagents (Darmstadt, Germany). Ethanol (95%), hydrochloric acid, and sodium hydroxide were purchased from Merck (Darmstadt, Germany). Ultrapure water was obtained using a water purification system (Merck, Darmstadt, Germany).
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