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37 protocols using dioc2 3

1

Mitochondrial Membrane Potential Analysis

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A membrane-potential-sensitive cyanine dye DiOC2(3) (Invitrogen, San Diego, CA, USA) was used for MMP analysis as previously described.34 (link) After treatment with DiOC2 (3) (50 nM, 30 mins), cells were analyzed by flow cytometry (Accuri™ C6).
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Flow Cytometric Analysis of Mitochondrial Membrane Potential

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MMP was measured using DiOC2(3) according to the manufacturer’s instructions (Invitrogen, Carlsbad, CA, USA) as we described previously [9 (link)]. Briefly, splenocytes were resuspended at 1 × 106/mL in 1 × PBS with 50 nM DiOC2(3) (Invitrogen, Carlsbad, CA, USA) and incubated at 37 °C for 30 min. Cells were washed in 1 × PBS and analyzed by flow cytometry using the 488 nm excitation laser and 530/30 nm bandpass and 670 nm long pass filters. The accumulation of the DiOC2(3) dye [37 (link)] within the mitochondria measured by emission in the green/red channels following excitation reflects the membrane potential. Background corrected mean fluorescence intensity (MFI) using unstained cells was used to calculate the FL3/FL1 ratios of DiOC2(3) test samples as previously described [37 (link)].
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Membrane Potential Measurement of S. mutans

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The membrane potential of untreated and EGCG-treated planktonic S. mutans was measured using the cationic dye 3,3′-diethyloxacarbocyanine iodide (DiOC2(3); Molecular Probes, Eugene, OR, USA) by flow cytometry according to the manufacturer’s instructions. DiOC2(3) exhibits green fluorescence in all bacterial cells, but the fluorescence shifts toward red emission at higher membrane potential values. Briefly, an overnight culture of S. mutans was resuspended in PBS to an OD of 0.3. The bacterial suspension was divided into 1 ml aliquots with different concentrations of EGCG and stained with 10 µl of 3 mM DiOC2(3) for 30 min in the dark. The samples were analyzed by flow cytometry (LSR-Fortessa flow cytometer, BD Biosciences), using the 488 nm excitation laser and collecting the data using the green (530nm) and red (610/620 nm) filters [40 (link)]. In addition, we measured the forward scatter (FSC) and the side scatter (SSC) of the untreated and EGCG-treated bacteria. FSC detects light scatter along the path of the laser and its intensity is proportional to the diameter of the cell. SSC measures light scatter at a ninety-degree angle relative to the laser and provides information about the granularity of the cell.
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Membrane Potential of S. mutans via DiOC2(3) Assay

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The membrane potential of S. mutans was measured using cationic dye 3,3′-diethyloxacarbocyanine iodide (DiOC2(3); Molecular Probes, Eugene, OR, United States) by flow cytometry according to the manufacturer’s instructions. DiOC2(3) exhibits green fluorescence in all bacterial cells, but the fluorescence shifts toward red emission at larger membrane potential. An overnight culture of S. mutans was resuspended in PBS to an OD600nm = 0.3 and exposed to different concentrations of CBG (0, 2.5, 5, and 10 μg/ml) and 30 μM DiOC2(3) for 30 min at room temperature. The samples were analyzed by flow cytometry (LSR-Fortessa flow cytometer) using the 488 nm excitation laser and collecting the data using the green and red filters.
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5

Membrane Potential Assay for MRSA

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The ability of the tested compounds to affect the MP of the MRSA CI strain using the cationic dye 3,3′-diethyloxacarbocyanine iodide (DiOC2(3); Molecular Probes, Eugene, OR, USA) in a microtiter well-based assay was determined as described previously65 (link) with some modifications. DiOC2(3) exhibits a shift in fluorescence from 500–575 nm (green) to >600 nm (red) in bacterial cells with an intact membrane. This red shift disappears when the bacterial membrane is damaged. Briefly, an overnight culture of MRSA was centrifuged, washed with PBS three times and further resuspended in PBS to a final concentration of OD595 = 3. Bacterial cells were incubated with DiOC2(3) at room temperature in the dark for 5 min. A 10-μl aliquot of this mixture was added to 40 μl reaction solution containing the tested compounds at sub-MICs or PBS (untreated control) and read immediately in an Infinite M200 Pro plate reader (Tecan). Excitation was read at 450 nm and emission at 690 nm. The difference in fluorescence between the tested compounds in treated and untreated control cells was detected at 690 nm and calculated as percentage of the untreated control (100%). The assay was performed in triplicate.
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6

Apoptosis Induction in P. notoginseng

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P. notoginseng leaves were purchased from Chinese herbal medicine market (Xi’An, China). Rh2, propidium iodide (PI), cisplatin, Z-VAD-FMK, and crystal violet were purchased from Sigma-Aldrich (St. Louis, MO, USA). Antibodies against Vimentin, E-Cadherin, N-Cadherin, PARP, and Annexin V-FITC Apoptosis Detection Kit were purchased from Abcam (Cambridge, UK). The Apo-direct kit was purchased from BD Bioscience (San Jose, CA, USA). Corning Matrigel Matrix was purchased from Corning Life Sciences (Tewksbury, MA, USA). Antibodies against p53, PARP, Bad, and Bak and actin were obtained from Santa Cruz Biotechnology (Santa Cruz, CA, USA). Antibodies against caspase-3, caspase-8, and caspase-9 were purchased from R&D Systems (Minneapolis, MN, USA). DiOC2(3) was purchased from Molecular Probes (Eugene, OR, USA). Antibody against cytochrome c was purchased from Proteintech Group Inc. (Rosemont, IL, USA).
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7

Mitochondrial Membrane Potential by Flow Cytometry

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Mitochondrial membrane potential was measured using 3,3′-diethyloxacarbocyanine iodide [DiOC2(3)] (Molecular Probe, The Netherlands) labeled cells by flow cytometry at 488/520 nm wavelengths.
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8

Intracellular ROS and Mitochondrial Membrane Potential

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To determine the intracellular ROS levels, cells were stained with 2′,7′-dichlorodihydrofluorescein acetate (H2-DCF; Sigma-Aldrich), and fluorescence intensity was measured according to the fluorescence detection conditions of FITC using the MACSQuant Analyzer (Miltenyi Biotech). A membrane potential probe, the 3,3′-diethyloxacarbocyanine iodide (DiOC2(3)), was used to evaluate the mitochondrial membrane potential. Cells were incubated with 10 μM DiOC2(3) (Thermo Fisher Scientific, Milan, Italy) for 30 min at 37 °C, washed twice, resuspended in PBS and analyzed by flow cytometry through the detection of the green fluorescence intensity of DiOC2(3).
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9

Mitochondrial Membrane Potential and Mass Assessment

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A membrane potential probe, 3,3′-diethyloxacarbocyanine iodide (DiOC2(3)), (Thermo Fisher Scientific, Milan, Italy), was used to evaluate the mitochondrial membrane potential [37 (link),38 (link),39 (link)]. Cells were incubated with 10 μM DiOC2(3) for 30 min at 37 °C, washed twice, resuspended in PBS and analyzed by flow cytometry. To measure changes in the mitochondrial mass, cells were exposed to 200 nM MitoTracker Red CMXRos probe (Thermo Fisher Scientific, Milan, Italy) for 30 min at 37 °C, according to the manufacturer’s instructions. After two washes, labelled mitochondria were analyzed by flow cytometry.
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10

Mitochondrial Membrane Potential Assay

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A membrane potential probe, the DiOC2(3) (3,3’-Diethyloxacarbocyanine Iodide), was used to evaluate the mitochondrial membrane potential. Cells were incubated with 10 μM DiOC2(3) (Thermo Fisher Scientific, Milan, Italy) for 30 min at 37 °C, washed twice and resuspended in PBS for flow cytometry analysis. The intensity of green fluorescence of DiOC2(3) was detected using the MACSQuant Analyzer.
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