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Endotoxin free water

Manufactured by GE Healthcare

Endotoxin free water is a highly purified water product designed for use in various laboratory applications. It is produced through a specialized filtration process that removes endotoxins, which are lipopolysaccharides derived from the cell walls of Gram-negative bacteria. This water is suitable for use in cell culture, molecular biology, and other applications where the presence of endotoxins must be minimized.

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3 protocols using endotoxin free water

1

Characterization of LPS Interactions

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Highly pure rough LPS from E. coli K12 strain LCD25 was obtained from List biological labs. The FITC labelled LPS from E. coli 014 (Ra) and 3H/14C labelled LPS from Salmonella enterica sv. Typhimurium PR122 (Rc) were kind gift from Prof. Robert Munford (NIAID). Pooled normal human plasma was from Innovative Research. Endotoxin free water was from GE Healthcare Life Sciences. Fluorescein isothiocyanate (FITC), Alexa 488 hydrazide and Alexa 594 NHS were obtained from Molecular Probes. Purified apo-A1 from human plasma was obtained from Athens Research & Technology. The rabbit anti-apoA1 antibody was from Abcam. The TNF-α ELISA kit was from R&D. Chromogenic LAL Endotoxin Assay Kit was from Genscript. Recombinant human LBP protein was from R&D.
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2

Isolation and Purification of Peptidoglycan

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PGN was prepared by the method described in Langer et al.81 (link) BHI agar plates were inoculated with 0.1 mL of an overnight culture of WT or ΔslpA B. thuringiensis and incubated at 37°C overnight. Lawns were scraped from the plates into 50-mL cold BHI and harvested by centrifugation (5000g, 37°C, 10 minutes). Pellets were washed in endotoxin free water (GE Healthcare Life Science), resuspended in 5 mL 8% SDS (Sigma-Aldrich Corp.), and boiled for 30 minutes. Lysed cells were then centrifuged at 25,000g for 20 minutes and washed 3× with endotoxin-free water. Washed pellets were resuspended with 40 U of DNase I and 7 U of RNase A (ThermoFisher Scientific) and incubated for 15 minutes at room temperature. To remove the nucleases, samples were resuspended in 4% SDS (Sigma-Aldrich Corp.), boiled for 15 minutes, and washed 3× with endotoxin free water, 1× with 2M NaCl, and 6× with endotoxin-free water. Pellets were then resuspended in endotoxin-free water, boiled for 5 minutes, and centrifuged as above. PGN was then dried, weighed, and resuspended in endotoxin-free water to a concentration of 40 mg/mL. Sterility was tested by spread plating on BHI agar. The level of endotoxin was measured by Pierce LAL chromogenic endotoxin quantitation kit (ThermoFisher Scientific) according to the manufacturer's instructions.
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3

Dialysis for Toxicity Removal in PS MNPs

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Because the PS nano-microspheres from Phosphorex Inc. were provided in an aqueous vehicle containing 0.1% of the detergent Tween, which alone could produce significant toxicity, dialysis was performed to remove it. Two milliliter samples of as purchased suspensions were loaded into 0.2 – 2.5 mL capacity 8 Kd MW cutoff Tube-O-DIALYZER™ micro dialysis tubes (Millipore Sigma, Burlington, MA) and floated in a large beaker containing 4 L of sterile deionized endotoxin-free water (GE Healthcare, Boston, MA) for 48 h at 4 °C with gentle stirring. Three 2.0 mL samples were dialyzed together, which would be expected to result in a dilution of the vehicle contaminant by a factor of 6/4000 = 0.0015, resulting in a negligible final Tween concentration of 0.00015%. At the end of dialysis the dialyzed test MNP suspensions were removed and their volumes, which increased slightly due to the greater osmotic pressure of the MNP suspension relative to the water, were measured in order to adjust the concentration of the samples. The dialyzed samples of PS MNPs from Phosphorex as well as the original non dialyzed carboxyl-PS MNPs from Thermo were then diluted to the desired starting MNP concentration and vortexed for 20 seconds.
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