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6 protocols using vectashield mounting medium with dapi

1

Quantifying Oxidative DNA Damage

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DNA damage was measured by immunofluorescence with an anti-8-hydroxydeoxyguanosine (8OHdG) monoclonal antibody (Abcam), following the manufacturer’s instructions. The secondary antibody was goat anti-mouse IgG2α conjugated with Alexa Fluor 488. Then cells were mounted with Vectashield Mounting Medium with DAPI (Thermo Fisher Scientific). The images were captured using the AxioVision Rel.4.6 computerized image analysis system (Carl Zeiss, Jena, Germany).
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2

Immunofluorescence Imaging of O-GlcNAc in COS7 Cells

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COS7 cells were fixed in 4% paraformaldehyde at 37 °C for 15 min and washed 3 times with PBS. Cells were permeabilized using 0.1% Triton X-100 in PBS-T for 0.5 h and blocked with 5% goat serum in 1% bovine serum for 1 h at room temperature. Then, COS7 cells were incubated with primary antibodies against O-GlcNAc (1:50, CTD110.6) diluted in 5% goat serum in 1% bovine serum overnight at 4 °C. Secondary antibody (goat anti-mouse IgM, conjugated to FITC) were used to visualize the proteins. Cells were cover slipped with Vectashield Mounting Medium with DAPI (Thermo) and mounted onto slides. Image acquisition was performed on a Leica confocal microscope.
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3

Immunofluorescence Staining of Cells

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Cells were fixed in 4% paraformaldehyde at 37 °C for 15 min and washed 3 times with PBS. Cells were permeabilized using 0.1% Triton X-100 in PBS-T for 0.5 h and blocked with 5% goat serum in 1% bovine serum for 1 h at room temperature. Then the cells were incubated with primary antibodies diluted in 5% goat serum in 1% bovine serum overnight at 4 °C. Secondary antibody were used to visualize the proteins. Cells were coverslipped with Vectashield Mounting Medium with DAPI (Thermo, MA, USA) and mounted onto slides. Image acquisition was performed on a Leica confocal microscope (Leica, CA, USA).
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4

Visualizing rCPB2 Toxin Binding

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The NCM460 cells cultured in collagen-coated cover slides were treated with rCPB2 toxin for different times (5 min, 30 min, 2 h, 4 h, 6 h, and 12 h) for evaluating the binding of rCPB2 to cell membranes. The rCPB2-treated cells were fixed with 4% paraformaldehyde in PBS at room temperature for 15 min, washed in PBS for 3 × 5 min, and permeabilized with 0.3% Triton X-100 for 10 min at room temperature. Nonspecific antibody binding was blocked using 5% normal donkey serum in PBS for 1 h at room temperature, after which primary antibodies against CPB2 toxin were applied at a 1 : 100 dilution in PBS and incubated at 4°C overnight. Primary antibody binding was detected using the FITC-labeled donkey-anti-mouse IgG secondary antibody (1 : 500) (Thermo, Rockford, USA). After extensive washing, cell membranes were mounted by Annexin A2 Polyclonal Antibody (1 : 200) (SanYing Biotechnology, China) as primary antibody, and Rhodamine- (TRITC-) conjugated goat anti-rabbit IgG as secondary antibody (1 : 250) (SanYing Biotechnology, China). After extensively washing, the slides were mounted for fluorescence in Vectashield Mounting Medium with DAPI (Thermo, Rockford, USA). Images were acquired using a Leica TCS SP2 A0BS Confocal System and processed on Leica Confocal Software v.2.6.1 (Leica, Germany).
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5

Immunofluorescence Analysis of Lung NOS2

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Anterior lobe of lungs were recovered from infected mice, fixed with 3.7% phosphate-buffered formalin, embedded in paraffin, sectioned in 3μm thickness sections and stained with hematoxylin and eosin (H&E). Immunofluorescence was performed on formalin-fixed tissue sections as previously described [24 (link)]. Briefly, antigens were unmasked and blocked with BSA and Fc-Block, and endogenous biotin was neutralized. Sections were probed with purified rabbit anti-NOS2 (M-19, Santa Cruz Biotechnology) followed by a secondary Alexa Fluor 568 goat anti-rabbit IgG (Invitrogen). Vectashield mounting medium with DAPI (Invitrogen) was used to detect nuclei. Images were obtained with an Olympus BX61 microscope and were recorded with a digital camera (DP70).
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6

Visualizing Photoreceptor Development in Mouse Retina

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Three-week-old and 22-week-old mouse eyes were fixed with 1% paraformaldehyde (PFA) in 0.1M PB at room temperature (RT) for 1 hour (h). Eyecups were then prepared, cryoprotected in increasing concentrations of sucrose from 5% to 20% in 0.1 M PB, embedded in a 20% sucrose/OCT compound (Sakura Finetek USA, Torrance, CA) mix at 2:1, and quick frozen. Retinal sections were cut at 10μm and placed on Superfrost slides. The retinal sections of 3-week mice were pre-incubated in 10% horse serum for 1 h at RT, and then incubated with rhodamine labeled peanut agglutinin (PNA) (1:1,000; Vector Laboratory, Burlingame, CA) in 3% horse serum for 1 h at RT. After the incubation, sections were mounted with VECTASHIELD Mounting Medium with DAPI (Vector Laboratory). The retinal sections of 22-week mice were preincubated in 10% horse serum for 1 h at RT, and then incubated with an antibody against rhodopsin (1:200; Gene Tex, Irvine, CA) overnight at 4°C. After incubation with Alexa Fluor 488-conjugated anti-mouse IgG (1:500; Invitrogen, Carlsbad, CA) and rhodamine labeled PNA (1:1,000) for 1 h at RT, sections were mounted with VECTASHIELD Mounting Medium with DAPI. Images were taken on the LSM 510 Meta laser-scanning microscope (Carl Zeiss, Thornwood, NY).
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