The largest database of trusted experimental protocols

Examiner z1

Manufactured by Zeiss
Sourced in Germany

The Examiner Z1 is a versatile lab equipment product designed for various applications. It features advanced optical and imaging capabilities to support research and analysis tasks. The core function of the Examiner Z1 is to provide users with high-quality imaging and analysis tools to support their work effectively.

Automatically generated - may contain errors

13 protocols using examiner z1

1

Optogenetic-Microdialysis Brain Histology

Check if the same lab product or an alternative is used in the 5 most similar protocols
At the end of the optogenetic-microdialysis or microdialysis experiments, animals were anesthetized with equithesin (3 ml/kg) (4.44 g of chloral hydrate, 0.972 g of sodium pentobarbital, 2.124 g of MgSO4, 44.4 ml of propylene glycol, 12 ml of ethanol, and distilled water up to 100 ml of the final solution; NIDA Pharmacy) and perfused transcardially with 0.1 M phosphate-buffered saline (PBS) followed by ice-cold 4% paraformaldehyde in PBS. Brains were kept in the same fixative for 18 hours and then stored in a 30% sucrose solution for at least 48 hours. Coronal sections (40 μm thick) were cut in a cryostat (model CM3050S, Leica) and collected in PBS. Sections were then evaluated for localization of implanted probes and ChR2-EYFP expression. Confocal fluorescence microscopy images were acquired with a confocal microscope (Examiner Z1, Zeiss) with a laser scanning module (LSM-710, Zeiss). Experiments where the probe was misplaced or where EYFP expression was not detected in the injection and target areas were discarded.
+ Open protocol
+ Expand
2

Immunofluorescent Staining of CRYAA and GJA8

Check if the same lab product or an alternative is used in the 5 most similar protocols
The sections were dried, incubated with 10% FBS-PBS blocking solution at room temperature for 1 h, and subsequently incubated with primary antibodies overnight at 4 °C: rabbit anti-CRYAA (1:100, A51111, ABclonal) and rabbit anti-GJA8 (1:100, A19312, ABclonal). The following day, the slides were washed 5 times with PBS (pH 7.4) for 3 min each and then incubated with a Goat Anti-Rabbit IgG H&L secondary antibody (Alexa Fluor 488,ab150077,abcam) at 37 °C for 1 h. Subsequently, the slides were washed 5 times with PBS for 3 min each, incubated with DAPI solution for 5 min at room temperature, washed 5 times with PBS for 3 min each, and mounted with anti-fluorescence quenching agent. Images were taken using a fluorescence microscope (ZEISS, Examiner.Z1, BIG.2).
+ Open protocol
+ Expand
3

Vesicle Trafficking in Fly Wings

Check if the same lab product or an alternative is used in the 5 most similar protocols
Intact, injured or crushed wings (1 to 5 days old flies) were dissected and mounted in Halocarbon oil 27 beneath a coverslip and imaged immediately. Images of vesicle trafficking were acquired on a spinning disc microscopy (Zeiss Examiner Z1) with a 63X oil-immersion objective at the location indicated (Fig. 1A). Time-lapse images were acquired with CCD camera (Hamamatsu Orca Flash 4.0) using Zen software (Zeiss) for a 3 minutes window. The wings were sitting in halocarbon oil no longer than 15 min before imaging. All the wings were imaged including the those with only labeled severed neurons or intact neurons.
+ Open protocol
+ Expand
4

Imaging of Drosophila Wing Anatomy

Check if the same lab product or an alternative is used in the 5 most similar protocols
Injured and intact wings of 3 days old adult flies were dissected and mounted between slide and coverslip with a drop of Halocarbon oil 27, and imaged immediately. Images were acquired on a spinning disc microscopy (Zeiss Examiner Z1) with a 63X oil-immersion objective, and CCD camera (Hamamatsu Orca Flash 4.0).
+ Open protocol
+ Expand
5

Patch-Clamp Recordings of Mouse Hippocampal Neurons

Check if the same lab product or an alternative is used in the 5 most similar protocols
Coronal slices (350 μm) were prepared from the dorsal HPC of adult mice, as described previously (Lovett-Barron et al., 2012 (link)). Slices were perfused with artificial cerebrospinal fluid (ACSF) containing 125 mM NaCl, 25 mM NaHCO3, 3 mM KCl, 1.25 mM NaH2PO4, 1 mM MgCl2, 2 mM CaCl2, 22.5 mM glucose, 3 mM sodium pyruvate, and 1 mM ascorbate and saturated with 95% O2 and 5% CO2. Experiments were done at 32°C–33°C. Slices were visualized with Dodt contrast optics using a Zeiss Examiner.Z1 with a 63× objective (numerical aperture [na] = 1.0) for somatic recordings. Neurons expressing GFP or YFP were selected for targeted patch-clamp recordings with a two-photon scanning upright microscope (Prairie Technologies). Whole-cell patch-clamp recordings from somata were obtained using a DaganBVC-700A amplifier in the active “bridge” mode, filtered at 1–10 kHz and digitized at 50 kHz. Recording pipettes were pulled from borosilicate glass to tip resistances of ~7–9 MΩ and contained 140 mM potassium gluconate, 4 mM NaCl, 10 mM HEPES, 4 mM Mg2ATP, 0.3 mM Tris2GTP, 14 mM phosphocreatine, and 0.05 mM Alexa 594 (pH 7.25). In current-clamp recordings, cells were held at their resting membrane potential (−73.4 ± 1 mV; n = 18), and in voltage-clamp recordings, the holding potential was −55 mV.
+ Open protocol
+ Expand
6

Confocal Imaging of Transgenic Zebrafish

Check if the same lab product or an alternative is used in the 5 most similar protocols
Images were acquired using an Olympus FV1000 confocal microscope equipped with a 20 and 40x water and 60X oil immersion objectives using the 405, 473 and 543 nm laser lines or using an upright microscope (Examiner Z1, Zeiss) equipped with a spinning disk head (CSU-X1, Yokogawa) and a modular laser light source (LasterStack, 3i Intelligent Imaging Innovations). To determine the overlap of GFP in the Tg(pkd2l1:GCaMP5G)icm07 transgenic embryos and larvae with pkd2l1, sst1.1 FISH or GABA and 5-HT IHC, fish were mounted laterally in 1, 5% agarose covered of Vectashield Mounting Medium (Vectorlabs, CA, USA). To analyze apical extensions, slices were transferred into Vectashield Mounting Medium as well (Vectorlab, CA, USA).
+ Open protocol
+ Expand
7

Patch-Clamp Recording of Hippocampal DG Neurons

Check if the same lab product or an alternative is used in the 5 most similar protocols
Brain slices were prepared with a Vibratome (VT1200s, Leica) in ice-cold, oxygenated artificial CSF (aCSF) containing 110 mM NaCl, 0.5 mM CaCl2, 2.5 mM KCl, 7 mM MgCl2, 1.3 mM NaH2PO4, 1.3 mM Na-ascorbate, 0.6 m M Na-pyruvate, 25 mM NaHCO3, and 20 mM Glucose, and then incubated in warm oxygenated aCSF (34 °C) for 1 hour. Brain slices (350 μm) containing the hippocampal region were transferred into the recording chamber and super-fused (2 ml/min) with oxygenated aCSF at room temperature (22–25 °C). Whole-cell patch recordings were performed with a computer-controlled amplifier (MultiClamp 700B, Molecular Devices). The pipettes for cell-attached recording (3–4 MΩ) contained bath solution and the seal resistance was ∽200 MΩ. GFP-positive neurons were targeted in the DG area under the visual guidance of green, fluorescent signals using an upright microscope (Examiner Z1, Zeiss). CNO (10 μM) dissolved in aCSF was released to the recording area with a small pressure using an 8-channel drug-delivery system (MPS-1, Inbio Life Science Instrument).
+ Open protocol
+ Expand
8

Confocal Imaging of Stained Embryos

Check if the same lab product or an alternative is used in the 5 most similar protocols
Stained embryos were mounted in 75% glycerol at 4  C and imaged using a Zeiss Examiner Z1 confocal microscope with a 20× plan NA 0.8 objective. All depicted images show a maximum projection of a z-stack unless differently stated in the figure legend.
+ Open protocol
+ Expand
9

Medullary slice fluorescence imaging

Check if the same lab product or an alternative is used in the 5 most similar protocols
After transcardial perfusion, brains were post fixed in 4% PFA for at least 24 h. Medullary slices were cut at a thickness of 150 µm using a Leica VT1200s vibratome. After imbedding in Dako Fluorescence Mounting (Agilent), slices were placed under an upright epifluorescence microscope Examiner Z1 (Zeiss, Göttingen, Germany), illuminated with a SOLA SE lamp (Lumencor, Beaverton, OR, USA) and a dual band filter (EGFP/mCherry; AHF Analysentechnik AG, Tübingen, Germany). Images were captured with an iPhone SE (Apple, Cupertino, CA, USA), which was attached to the ocular with a smartphone adapter (Bresser GmbH, Rhede, Germany).
+ Open protocol
+ Expand
10

Patch Clamp Experiments in Brain Slices

Check if the same lab product or an alternative is used in the 5 most similar protocols
Whole cell patch clamp experiments were made at 32 °C in a submersion recording chamber under an Examiner Z1 (Zeiss, Germany) upright microscope. Slices were bathed in the saline described above (without glutathion and sodium pyruvate), at a rate of 3 mL/min. Whole-cell recording pipettes (4–6 MΩ) contained (in mM) 140 K-gluconate, 11 EGTA, 10 HEPES, 1 CaCl2, 2 ATP-Mg, and 0.4 Na-GTP for the current clamp experiments in the cortex. They contained an otherwise similar solution to the exception of K-gluconate, replaced by CsCl, and addition of 2 mM QX314, for the voltage clamp experiments performed in the STN. In the subset of experiments that established the I.V. curve and conductance of AMPA EPSCs, a specific intra-pipette solution was used. Its composition was (in mM): 120 cesium methanesulfonate, 10 NaCl, and 5 TEACl, in addition to 11 EGTA, 10 HEPES, 1 CaCl2, 2 ATP-Mg, 0.4 Na-GTP and 2 QX314. In all cases, the osmolarity of intra-pipette solutions was between 280 and 300 mOsm and pH was adjusted to 7.25. Cells were visualized under IR-DIC and fluorescence microscopy. Experiments were conducted with Axon Instruments hardware and software (Axopatch-1D, Digidata 1322 A, and PClamp V9.2; Molecular Devices, USA), with the amplifier filter set at 5 kHz, and the digitization rate at 20 kHz. Voltages were corrected off line for liquid junction potentials.
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!