The largest database of trusted experimental protocols

8 protocols using p62 antibody

1

Evaluating Protein Expression and Signaling

Check if the same lab product or an alternative is used in the 5 most similar protocols
Fetal bovine serum (FBS) and 0.25% Trypsin-EDTA were obtained from Gibco (Gibco, Grand Island, NY, USA). The whole protein extraction kit and BCA protein content assay kit were purchased from KeyGEN Biotechnology (KeyGEN, Nanjing, China). CCK-8 assay kit (APExBIO, Houston, TX, USA), mTOR pathway inhibitor PP242 (APExBIO, Houston, TX, USA), ROS assay kit (Elabscience Biotechnology, Wuhan, China), sodium butyrate (Sigma-Aldrich, St. Louis, MO, USA), and MMP assay kit was purchased from Beyotime (Shanghai, China). SDS-PAGE gel kit (Solarbio, Beijing, China), GAPDH antibody (Cambridge, UK), and P62 antibody were obtained from Abcam (Cambridge, UK). mTOR antibody, AKT1 antibody, and FOXO antibody were purchased from Proteintech (Proteintech, Wuhan, China).
+ Open protocol
+ Expand
2

Immunoblotting Antibody Identification

Check if the same lab product or an alternative is used in the 5 most similar protocols
Immunoblotting was performed as described. We obtained p62 antibody from Abcam; LC3B antibody from Novus Biologicals (NB-100–2200) and GAPDH antibody from Cell Signaling Technologies (#5174).
+ Open protocol
+ Expand
3

In Vitro and In Vivo Evaluation of Hypoxia-Activated Anticancer Therapy

Check if the same lab product or an alternative is used in the 5 most similar protocols
HSA was obtained from CSL Behring AG (Switzerland). CQ was obtained from J&K Scientific Ltd. (China). Potassium permanganate (KMnO4) and hydrogen peroxide (H2O2, 30 wt%) were obtained from Sino pharm Chemical Reagent Co. (China). 4',6-diamidino-2-phenylindole dihydrochloride (DAPI) was obtained from Molecular Probes (USA). RPMI-1640 medium was obtained from Gibco (Grand Island, NY, USA). The LC-3B antibody, p62 antibody, and HIF-1α antibody were obtained from Abcam (UK). The pH-sensitive fluorescent dye SNARF-4F was obtained from Life technologies (USA). The hypoxia probe pimonidazole (Hypoxyprobe-1 plus kit) was obtained from Hypoxyprobe Inc. (USA), and 1×Phosphate buffer solution (PBS) and deionized water were used in the experiments. All male Babl/c nude mice (17~20 g) were obtained from Yangzhou University Medical Center.
+ Open protocol
+ Expand
4

HeLa Cell Autophagy and Metabolism

Check if the same lab product or an alternative is used in the 5 most similar protocols
HeLa (from American Type Culture Collection, Manassas, VA, USA) and HeLa-R cells were cultured at 37 °C in DMEM in a humid incubator with 5% CO2.
Reagents used in this study were: 3-MA (M9281) was purchased from Sigma-Aldrich (St. Louis, MO, USA). Lipofectamine 2000 reagent was purchased from Invitrogen, Karlsruhe, Germany. 2-DG (D8375) was obtained from Sigma, St. Louis, MO, USA. KA (57710-57-3) was obtained from TMS Co. Ltd (Suwon, South Korea).
Antibodies used in this study were: P62 antibody (Abcam, Cambridge, UK; ab56416), Beclin 1 (Santa Cruz Biotechnology, Santa Cruz, CA, USA; sc-11427), LC3 (Abcam, ab58610), Atg12-Atg5 (Abcam, ab78073), Atg7 (Abcam, ab53255), PKM2 (Abcam, ab58610), LDHA (Abcam, ab47010), ALDOC (Abcam, ab71294), TPI1 (Abcam, ab96696), MDH1 (Abcam, ab76616), UQCRC1 (Abcam, ab96333), HIF-1α (Abcam, ab16066), horseradish peroxidase (HRP)-conjugated anti-rabbit secondary antibody (Santa Cruz Biotechnology, sc-2004), HRP-conjugated anti-mouse secondary antibody (Santa Cruz Biotechnology, sc-2005).
+ Open protocol
+ Expand
5

Colorectal Cancer Cell Culture Conditions

Check if the same lab product or an alternative is used in the 5 most similar protocols
HCT116 and SW480 CRC cells were maintained in Dulbecco's modified Eagle's medium (DMEM) (Invitrogen, Paisley, Scotland, UK) supplemented with 10% fetal bovine serum (FBS) (HyClone, Logan, UT, USA), and antibiotics (100 U/ml penicillin and 100 µg/ml streptomycin) in a humidified 5% CO2 atmosphere at 37°C. Sodium selenite was purchased from Sigma-Aldrich (St. Louis, MO, USA). Antibodies against cleaved caspase-9, cleaved PARP, LC3 or Beclin-1 were purchased from Cell Signaling Technology (Danvers, MA, USA). Antibodies to β-actin were purchased from Sigma-Aldrich. The p62 antibody was purchased from Abcam (Cambridge, MA, USA).
+ Open protocol
+ Expand
6

Photodynamic Therapy and Autophagy Regulation

Check if the same lab product or an alternative is used in the 5 most similar protocols
RAW264.7 cells (5 × 105 cells) were seeded and incubated with LPS or LPS in the presence of LDL. The cells were treated with DS-Ce6 (equiv. 5 μM Ce6) for 1 h, irradiated using a 670 nm laser (50 mW, irradiated area 3.8 cm2) for 10 s, and further incubated for 15 min, 30 min, and 1 h. Cells without laser irradiation were used as a control. The cells were fixed with 4% paraformaldehyde in PBS (pH 7.4) for 10 min at room temperature, blocked with 1% BSA for 30 min, and incubated with LC3 antibody (1:200; Novus Biologicals) for 1 h at room temperature, followed by incubation with Alexa Fluor 594 AffiniPure goat anti-rabbit IgG (1:100) in the dark. After washing three times with PBS for 5 min each in the dark, the cells were incubated with p62 antibody (1:200; Abcam) for 1 h at room temperature and then with Alexa Fluor 488 AffiniPure goat anti-rabbit IgG (1:100) in the dark. After washing with PBS, the cells were mounted using a fluorescence mounting medium with DAPI. Fluorescence was observed using a model LSM 780 Meta NLO confocal microscope (Carl Zeiss). The LC3 puncta per cell of at least 20 cells in each experimental arm was counted by a blinded observer (n = 5).
+ Open protocol
+ Expand
7

Quantifying Autophagy Markers in Endothelial Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
Brain microvascular endothelial cells that had undergone the different treatments for 48 h were seeded into 6-well plates, washed with phosphate buffer solution (PBS), and then fixed with 4% paraformaldehyde (PFA) at 4°C overnight. Next, the cells were washed twice with PBS (3 min per wash), blocked with 10% goat serum for 15 min, and incubated with LC3B antibodies (1:200, Abcam, Cambridge, MA, United States) or P62 antibodies (1:50, Abcam, Cambridge, MA, United States) at 4°C for 1 h. After being washed three times with PBS (3 min per wash), the cells were incubated with Alexa Fluor 488 (for P62) or Alex Fluor 594 (for LC3B) conjugated secondary antibodies (1:1000, Abcam, Cambridge, MA, United States) at room temperature for 1 h. Next, the secondary antibodies were removed, and the cells were washed three times with PBS (5 min per wash). Finally, the cells were mounted with anti-fluorescence quench sealing liquid, and analyzed under an inverted florescence microscope (Bx51. Olympus Corporation, Shinjuku, Japan).
+ Open protocol
+ Expand
8

Quantifying p62 Protein Expression by Western Blot

Check if the same lab product or an alternative is used in the 5 most similar protocols
As previously described [14 (link)], cells from each group were collected and placed in a 1.5 mL EP tube, followed by addition of appropriate amount of lysate for completely lysis and ultrasonic testing in the ice bath sing ultrasonic processor; after centrifugation at 2000 rpm for 15 min at 4 °C, the supernatant was extracted and stored at − 20 °C for further use. The oncentration of proteins extracted above was quantified sing BCA Protein Quantification Kit; 5 × loading buffer as added to the sample, followed by boiling at 100 °C or 5 min to denature the proteins. After processing by DS-PAGE, the proteins were transferred to the NC embrane using protein transfer device and then locked by 5% skimmed milk powder for 1 h. After addition of p62 antibodies (Abcam UK) and incubation vernight at 4 °C, the proteins were washed by BST three times before 1 h of fluorescent secondary ntibody incubation and another three times of TBST ashing; Western Blot imaging software Odyssey nalyzer was used to detect and produce images.
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!