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Quant it picogreen dsdna quantification assay

Manufactured by Thermo Fisher Scientific
Sourced in United States

The Quant-iT™ PicoGreen® dsDNA quantification assay is a fluorescence-based method for the sensitive detection and quantification of double-stranded DNA (dsDNA). It provides a rapid and accurate way to measure dsDNA concentrations in solution.

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4 protocols using quant it picogreen dsdna quantification assay

1

Quantification of GAG and DNA in Constructs

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To quantify retained glycosaminoglycans (GAG) and DNA, cultured constructs were frozen and lyophilized. After careful removal of the cell-free surface hydrogel layer, the cell-laden proportions of the constructs were digested overnight in 0.5 mg/mL proteinase K (Invitrogen) at 56 °C on an Eppendorf® Thermomixer® (Eppendorf, Hamburg, Germany). GAG concentration in the digest was measured using the dimethyl-methylene blue (DMMB) assay (pH 1.5). Absorbances at 525 and 595 nm were measured, and concentrations calculated using the ratio of absorbances, compared to a quadratic standard curve prepared from chondroitin sulfate C (Sigma-Aldrich). DNA concentrations in the digests were measured using the Quant-iT™ PicoGreen® dsDNA quantification assay (Invitrogen).
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2

Quantitative Analysis of DNA and GAGs in GelMA-HAMA Constructs

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To analyse the DNA and glycosaminoglycan (GAG) content of cell-laden GelMA-HAMA constructs, samples were weighed and enzymatically digested in a two-step procedure by overnight incubation in phosphate-buffered EDTA (pH 7.1) containing 1 mg/mL hyaluronidase (Sigma) at 37 °C, followed by addition of 0.5 mg/mL proteinase K (Invitrogen) and overnight incubation at 56 °C. DNA concentration in the digests was measured using the Quant-iT™ PicoGreen® dsDNA quantification assay (Invitrogen). GAG concentrations were measured using the dimethyl-methylene blue (DMMB) assay at pH 1.560 (link) and obtained values were corrected using values for cell-free gels to determine the amount of GAGs produced by cells. GAGs secreted to the culture media were measured at the last media change and expressed as GAGs secreted to the media within 24 h of culture, with and without 1 hour of mechanical loading.
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3

Allogeneic Cell Transplantation Under Kidney Capsule

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NPSC and NPI were isolated as described previously35 (link). Prior to transplantation the number of cells was determined by measuring
the total cellular DNA content using the Quant-iT PicoGreen dsDNA quantification
assay (Invitrogen, Carlsbad, CA, USA)35 (link). Aliquots consisting of 11 × 106 cells were gently placed
under the kidney capsule of isofluorane-anesthetized Lewis rats35 (link).
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4

HUVEC Proliferation Assay with Peptides

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HUVECs were suspended in control media at 2.0×104 cells/mL. 0.5 mL of the cell solution was seeded in each well of a 24-well plate. To achieve uniform cell adhesion, cells were allowed to adhere at room temperature for 1 hour before being transferred to the incubator [41 (link)]. 16 hours later, cells were washed twice with PBS and treated with 0.5 mL of either control media with or without peptide drugs or controls. A preliminary dose screening study (data not shown) was conducted to identify concentration at which each “N” peptide induced proliferation, and that concentration was used for both the “N” and “2T” treatments. Media was changed daily, and after 72 hours cells were washed twice with PBS, and lysed via sonication in 1x TE buffer (10 mM Tris, 1 mM EDTA in ddH2O, pH 7.5). DNA content was quantified using the Quant-iT picoGreen dsDNA quantification assay (Invitrogen). Each plate contained a control media group to account for plate-to-plate variability.
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