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5 protocols using alpha smooth muscle actin

1

Comprehensive Immunohistochemistry Profiling

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Immunohistochemistry was performed using a Ventana Bench Mark XT Autostainer (Ventana Medical Systems, Tucson, AZ, USA) and a LEICA BOND-III Autostainer (Leica Biosystems, Newcastle Upon Tyne, UK). Tested primary antibodies were as follows: NOVA1 (dilution 1:500; Abcam, Cambridge, UK), CD68 (dilution 1:150; DAKO), CD20 (dilution 1:1600; clone L26; DAKO), CD3 (dilution 1:200; LabVision, Fremont, CA, USA),
CD4 (dilution 1:200; Cell Marque, Rocklin, CA, USA), FOXP3 (dilution 1:100; Aviva Systems Biology, CA, USA), myeloperoxidase (dilution 1: 2000, DAKO), CD34 (dilution 1:50; clone QBEnd 10; DAKO), S100 (dilution 1:2000; DAKO), and alpha smooth muscle actin (dilution 1:500; clone 1A4; DAKO). Double staining with NOVA1/CD20, NOVA1/CD3, NOVA1/CD21, and NOVA1/CD68 was performed using palatine tonsil tissues for cellular localization of NOVA1 expression. Cell typing of immune cells and stromal spindle cells was also confirmed histomorphologically with H&E and immunohistochemical stains as follows: macrophages/monocytes/dendritic cells (CD68, S100, myeloperoxidase), B-lymphocytes (CD20), T-lymphocytes (CD3), regulatory T cells (FOXP3), neutrophils (myeloperoxidase), stromal spindle cells (Schwann cells, fibroblasts, support cells, and endothelial cells; S100, smooth muscle actin, and CD34).
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2

Histological Analysis of AAA Samples

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Samples of arterial wall and intra-luminal thrombus obtained from AAA patients were embedded in paraffin, and 4 μm cross-sections were cut. Ceroids were detected by direct observation of tissue by fluorescence microscopy (ceroids autofluoresce at 550 nm, producing a red signal). Immunohistochemistry was performed with antibodies against the following proteins: PRDX6 (ab16947, abcam), the lipid peroxidation marker MDA (ab6463, abcam), the neutrophil marker CD15 (Dako), and alpha smooth muscle actin (Dako). Sections were then incubated with the appropriate biotinylated secondary antibody and ABComplex, followed by staining with 3,30-diaminobenzidine (DAB), hematoxylin counterstaining, and mounting in DPX medium.
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3

Western Blot Analysis of Histone Acetylation

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Both the treated and untreated HCF cultures were lysed in a radioimmunoprecipitation assay (RIPA) lysis buffer containing a protease inhibitor cocktail (Santa Cruz Biotechnology, Santa Cruz, CA) followed by centrifugation at 10,000 g for 10 min. Samples were suspended in a NuPAGE LDS buffer containing a reducing agent (Life Technologies Corporation, Grand Island, NY) and heated at 70 °C for 10 min. Protein samples were resolved by NuPAGE Novex Bis-Tris mini gels (Invitrogen) and transferred onto the polyvinylidene difluoride membranes using wet transfer at 25 V. The transferred proteins were detected by incubating the membrane with primary antibodies: TGIF1, TGIF2 (Santa Cruz Biotechnology, Santa Cruz, CA), acetylhistone H3, acetyl histone H4 (EMD Millipore, Billerica, MA), alpha smooth muscle actin (αSMA Dako, Carpinteria, CA), and glyceraldehyde-3-phosphate dehydrogenase (GAPDH; Santa Cruz Biotechnology), followed by alkaline phosphatase conjugated anti-mouse, anti-goat, or anti-rabbit secondary antibody. After washing three times in 0.05% Tween-20 in Tris-buffered saline of pH 8.0 for 5 min each, the blot was developed using the nitroblue tetrazolium/5-bromo-4-chloro-3-indolylphosphate method. Three separate western blots were performed for each experiment. The digital quantification of western blots was performed using NIH Image J software.
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4

Histopathological and Immunostaining Analysis of Spleen Tissue

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Formalin-fixed and paraffin-embedded spleen tissue blocks were cut into 5-μm-thick sections. Sections were stained with hematoxylin and eosin (H&E) solution for histopathological analysis and also with Sirius red to assess splenic collagen content. These histological assessments were conducted according to the methods we previously reported50 (link),51 (link). Immunostaining was performed for Ki67 (Abcam, Cambridge, MA) to determine proliferating cells and alpha-smooth muscle actin (α-SMA) (a marker of myofibroblasts and fibroblastic reticular cells) (Dako, Carpinteria, CA). Sections were visualized by light microscopy and images were acquired using an Olympus camera (Olympus, Japan) and Zeiss fluorescence microscopy (Zeiss, Germany). Analysis of digitized images was performed using ImageJ and Prism software.
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5

Immunohistochemical Visualization of Vascular Markers

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Immunostainings of CD31 and alpha-smooth muscle actin in fresh tissue sections were performed using polyclonal CD31 (Dako, Hamburg, Germany) and alpha-smooth muscle actin (Abcam, Cambridge, UK) antibodies at a concentration of 1:500 for 1 h at room temperature, followed by Cy-3 and Cy-2conjugated secondary antibody (Beckman, CA, USA) incubation for an additional 1 h in the dark. Nuclei were stained using mounting medium containing DAPI (Vector Laboratories, Inc., CA, USA). Images were taken with a laser scanning microscope (LSM510, Zeiss, Jena, Germany).
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